Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459895
Identifier: 77459895
GI number: 77459895
Start: 4156381
End: 4156914
Strand: Reverse
Name: 77459895
Synonym: Pfl01_3673
Alternate gene names: NA
Gene position: 4156914-4156381 (Counterclockwise)
Preceding gene: 77459896
Following gene: 77459894
Centisome position: 64.56
GC content: 64.42
Gene sequence:
>534_bases ATGATGGGCAGACACGGGCGAGTAATCGCCACAGCCACGTTGCTGTTGTTCACCGAGATCGCGTCGGCGGCGGTCAGTGG GCATATCCTTGCGCGACTGACGCTGATCGCCGGCTGCGAGGTCACCAACGCCTCCAGCCCCGCCAGCCCGGTGGATGGGC TGGGCTCTCTCGATTTCGGCCAGCAGGGCCCGACCTGGAACGCACCGATCAAGGCCAGCCTCAGCGAAGCGGGCAGCGGC CAACTGAATGTCGCCTGCAACCCTTCGGTCACCGGGTTCACCGTGACCATCGACGGCGGCACCCACGGCGACGGCACCAC ACGCCGGTTGAGCAACGGGCGCCAGACGCTCCCCTATCAGCTGTTTCTCGATGCCTCCGGCAGCCAGAGCTACAGCATCG GTCAACAACACAATTTCGCTGTCACCAGCGGCGCACAGATACCCATCCCGGTATTTGGCTCGGTGGTGGCGAACACCCGA GCGGTACCGGCTGGTGTCTATACCGACACCCTGACGGTGACGCTCGACTGGTAA
Upstream 100 bases:
>100_bases TCGCGGAGTTTTTCAGCCATTCGGTGGAACCGGGTGGCGCAGGGAAGGGCGTTCAATGACGAGCGCAATGGTCGAGTGAT CCTGAAGGAGTCGGGGCTCA
Downstream 100 bases:
>100_bases CCCCGTAGAGGACGAACACCATGCGTACGATTGCATCAAGGATAGGTTTGTCGTTGCTCGGCCTGACGCTCGCTTCCAGC GTCAATGCCGCCACCACGGT
Product: spore coat U
Products: NA
Alternate protein names: CsuA/B; Spore Coat U; Type 1 Pili Subunit CsuA/B Protein; Type I Pilus Protein CsuA/B
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MMGRHGRVIATATLLLFTEIASAAVSGHILARLTLIAGCEVTNASSPASPVDGLGSLDFGQQGPTWNAPIKASLSEAGSG QLNVACNPSVTGFTVTIDGGTHGDGTTRRLSNGRQTLPYQLFLDASGSQSYSIGQQHNFAVTSGAQIPIPVFGSVVANTR AVPAGVYTDTLTVTLDW
Sequences:
>Translated_177_residues MMGRHGRVIATATLLLFTEIASAAVSGHILARLTLIAGCEVTNASSPASPVDGLGSLDFGQQGPTWNAPIKASLSEAGSG QLNVACNPSVTGFTVTIDGGTHGDGTTRRLSNGRQTLPYQLFLDASGSQSYSIGQQHNFAVTSGAQIPIPVFGSVVANTR AVPAGVYTDTLTVTLDW >Mature_177_residues MMGRHGRVIATATLLLFTEIASAAVSGHILARLTLIAGCEVTNASSPASPVDGLGSLDFGQQGPTWNAPIKASLSEAGSG QLNVACNPSVTGFTVTIDGGTHGDGTTRRLSNGRQTLPYQLFLDASGSQSYSIGQQHNFAVTSGAQIPIPVFGSVVANTR AVPAGVYTDTLTVTLDW
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18188; Mature: 18188
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGRHGRVIATATLLLFTEIASAAVSGHILARLTLIAGCEVTNASSPASPVDGLGSLDFG CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEHHHCCEECCCCCCCCCCCCCCCCCCC QQGPTWNAPIKASLSEAGSGQLNVACNPSVTGFTVTIDGGTHGDGTTRRLSNGRQTLPYQ CCCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCEE LFLDASGSQSYSIGQQHNFAVTSGAQIPIPVFGSVVANTRAVPAGVYTDTLTVTLDW EEEECCCCCCEECCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEEC >Mature Secondary Structure MMGRHGRVIATATLLLFTEIASAAVSGHILARLTLIAGCEVTNASSPASPVDGLGSLDFG CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEHHHCCEECCCCCCCCCCCCCCCCCCC QQGPTWNAPIKASLSEAGSGQLNVACNPSVTGFTVTIDGGTHGDGTTRRLSNGRQTLPYQ CCCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCEE LFLDASGSQSYSIGQQHNFAVTSGAQIPIPVFGSVVANTRAVPAGVYTDTLTVTLDW EEEECCCCCCEECCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA