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The map label for this gene is ytfM [H]

Identifier: 77459869

GI number: 77459869

Start: 4127001

End: 4128728

Strand: Reverse

Name: ytfM [H]

Synonym: Pfl01_3647

Alternate gene names: 77459869

Gene position: 4128728-4127001 (Counterclockwise)

Preceding gene: 77459870

Following gene: 77459868

Centisome position: 64.13

GC content: 61.75

Gene sequence:

>1728_bases
ATGAAGTTTCCAGGAAGATTTACCAGTGGCGTGCTCATGCTGTTAACCAGCTGCGCGGCGCTGGCGCAAAGTGAATTGGA
TGTGCGGATCAAACCGTCCAACGATGAACTGAAAGCCAATATAGAAGGCTATATCGGCAGCCTCGGCGATCGTGACGAAG
AAGCCTTGCAGCGCTTCAGTCGCGGCGCCGAAGAACAGGCGCGCAAGGCCGCCCAGGCCTTGGGTTATTACCAGCCGCAG
ATCGAAAGTGACGTCAAGGGCGGTGAAAAACCGCGTCTGGTGCTGAACATCGATCCCGGCGAGCCGATCCGCCTGCGCAA
CGTAACCGTGCGGGTCGACGGCCCGGCGGCCTCTCTCAAATCCTTTCGAGTCCCGAAAAGTGACGTGCTCAAGCCCGGCG
CGGTGCTCAACCATGGGCGTTATGAAGACGCCAAGCGCCTGATCCAGAACCAGGCTTCGCGCTATGGGTTCTTCAGTGGC
CGCTTCACCAGCCAGAAATTGATGGTCGATCCACGCGCCGGGGTCGCCGACGTCGAATTGATCTACGAAAGCGGTCCGCG
TTATGCGCTGGGCAAAGTCAGTTTCGAGGGCGACACACCGTTCGACGAAGACCTGCTGCAACGCATGGTGCCGTTCAAGG
CCGGCGAGCCGTATGACTCCGAGCTGATCGCCGAACTCAACCGCGACCTGCAATCGAGCGGCTATTTCGAGGGCGTGCGG
GTCGACGCCGCACCGACCGCCGCAAATAACGACGTGATCCCGGTGGACGTCAAACTCGACACCCGCAAGCCGCGCACCAT
GGGCCTGGGTCTGGGTTATTCCACCGACGTCGGCCCGCGCATCAAGGCCAACTGGACCCGTCACTGGGTCAACCCGCAGG
GCGACAGTTATGGCTGGGAGGCCGAACTGTCGGCGCCACGGCAGAACGTCGGTCTGTTCTACGACATCCCGCTGGACCCG
CCGCTGACCGACAAACTGCGCTGGGCCGGCGGTTATCAATACGAGGACATCGACGGTTCCGACACCTTGAGCAAGCTGTT
GACCTTCGGCCCGGAATGGCACAGCAAATTGCCCAGCGGCTGGCAGCGGGTGATCTCGCTGAAATGGCAGCGCGAGGAAT
ACCAGCTCGGCGACGACTCCGGTCTGAGCACCTTGCTGATGCCCGGCGTCAGCTATTCCTACCTCAAGAGTGACAACCGC
ATCGACCCGCACAATGGCTATCGCCTGACCTTCGAAAGCAAAGTGGCGAAAGAAGGCCTCGGCTCGGACAACAACCTGCT
TTATGGCACGGCGCTGATCAAGGGCCTGACCACCGTGTTCGACAAGCACCGTTTGCTCGGTCGGGTCCAGGTCGGCGGCA
GCGCCACCAACGGCTACAAATCGGTGCCGCCGTCGCTGCGTTTCTTCGCCGGTGGCGATCAGAGCGTGCGCGGCTATGAC
TATCAGAGCCTGTCCCCGGAGAACTCCGAGGGCGACCGCATCGGCGGGCGCTACATGGTGGCCGGCAGCGTCGAGTATCA
ATACTCGATTGCCGAGAAGTGGCGCGTGGCGACTTTCGTCGATCAGGGCAACTCCTTCAACAAACTCGAACTGCCGAACC
TCAAGACCGGGGTCGGTATCGGTGTGCGCTGGGTCTCACCGGTGGGGCCGATCCGCCTCGACCTGGCCCACGCGCTGGAC
GACGATGGCGGCATCCGGCTGCACTTTTCCATGGGGCCTGAGCTGTGA

Upstream 100 bases:

>100_bases
CAACCCGCAGGTGTTACAAACAGCAACGGGATGACCGTCGAACTTTTGGGGGAATTTCCTGTTCTATCACGCTCCCAAGC
CCGTGATAGCATCCGCGCCT

Downstream 100 bases:

>100_bases
AGCGTGGTTTGAAAATATCGGCGCTGGCGTTGTTGTCGCTGGTGCTGCTGATTGTATTGAGCATTACCGCTGTGCTCGGA
ACTCAGGCCGGCAGCCGTTG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MKFPGRFTSGVLMLLTSCAALAQSELDVRIKPSNDELKANIEGYIGSLGDRDEEALQRFSRGAEEQARKAAQALGYYQPQ
IESDVKGGEKPRLVLNIDPGEPIRLRNVTVRVDGPAASLKSFRVPKSDVLKPGAVLNHGRYEDAKRLIQNQASRYGFFSG
RFTSQKLMVDPRAGVADVELIYESGPRYALGKVSFEGDTPFDEDLLQRMVPFKAGEPYDSELIAELNRDLQSSGYFEGVR
VDAAPTAANNDVIPVDVKLDTRKPRTMGLGLGYSTDVGPRIKANWTRHWVNPQGDSYGWEAELSAPRQNVGLFYDIPLDP
PLTDKLRWAGGYQYEDIDGSDTLSKLLTFGPEWHSKLPSGWQRVISLKWQREEYQLGDDSGLSTLLMPGVSYSYLKSDNR
IDPHNGYRLTFESKVAKEGLGSDNNLLYGTALIKGLTTVFDKHRLLGRVQVGGSATNGYKSVPPSLRFFAGGDQSVRGYD
YQSLSPENSEGDRIGGRYMVAGSVEYQYSIAEKWRVATFVDQGNSFNKLELPNLKTGVGIGVRWVSPVGPIRLDLAHALD
DDGGIRLHFSMGPEL

Sequences:

>Translated_575_residues
MKFPGRFTSGVLMLLTSCAALAQSELDVRIKPSNDELKANIEGYIGSLGDRDEEALQRFSRGAEEQARKAAQALGYYQPQ
IESDVKGGEKPRLVLNIDPGEPIRLRNVTVRVDGPAASLKSFRVPKSDVLKPGAVLNHGRYEDAKRLIQNQASRYGFFSG
RFTSQKLMVDPRAGVADVELIYESGPRYALGKVSFEGDTPFDEDLLQRMVPFKAGEPYDSELIAELNRDLQSSGYFEGVR
VDAAPTAANNDVIPVDVKLDTRKPRTMGLGLGYSTDVGPRIKANWTRHWVNPQGDSYGWEAELSAPRQNVGLFYDIPLDP
PLTDKLRWAGGYQYEDIDGSDTLSKLLTFGPEWHSKLPSGWQRVISLKWQREEYQLGDDSGLSTLLMPGVSYSYLKSDNR
IDPHNGYRLTFESKVAKEGLGSDNNLLYGTALIKGLTTVFDKHRLLGRVQVGGSATNGYKSVPPSLRFFAGGDQSVRGYD
YQSLSPENSEGDRIGGRYMVAGSVEYQYSIAEKWRVATFVDQGNSFNKLELPNLKTGVGIGVRWVSPVGPIRLDLAHALD
DDGGIRLHFSMGPEL
>Mature_575_residues
MKFPGRFTSGVLMLLTSCAALAQSELDVRIKPSNDELKANIEGYIGSLGDRDEEALQRFSRGAEEQARKAAQALGYYQPQ
IESDVKGGEKPRLVLNIDPGEPIRLRNVTVRVDGPAASLKSFRVPKSDVLKPGAVLNHGRYEDAKRLIQNQASRYGFFSG
RFTSQKLMVDPRAGVADVELIYESGPRYALGKVSFEGDTPFDEDLLQRMVPFKAGEPYDSELIAELNRDLQSSGYFEGVR
VDAAPTAANNDVIPVDVKLDTRKPRTMGLGLGYSTDVGPRIKANWTRHWVNPQGDSYGWEAELSAPRQNVGLFYDIPLDP
PLTDKLRWAGGYQYEDIDGSDTLSKLLTFGPEWHSKLPSGWQRVISLKWQREEYQLGDDSGLSTLLMPGVSYSYLKSDNR
IDPHNGYRLTFESKVAKEGLGSDNNLLYGTALIKGLTTVFDKHRLLGRVQVGGSATNGYKSVPPSLRFFAGGDQSVRGYD
YQSLSPENSEGDRIGGRYMVAGSVEYQYSIAEKWRVATFVDQGNSFNKLELPNLKTGVGIGVRWVSPVGPIRLDLAHALD
DDGGIRLHFSMGPEL

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=584, Percent_Identity=34.7602739726027, Blast_Score=334, Evalue=1e-92,
Organism=Escherichia coli, GI1786374, Length=563, Percent_Identity=21.8472468916519, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 63590; Mature: 63590

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPGRFTSGVLMLLTSCAALAQSELDVRIKPSNDELKANIEGYIGSLGDRDEEALQRFS
CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEHHHHHCCCCCCCHHHHHHHH
RGAEEQARKAAQALGYYQPQIESDVKGGEKPRLVLNIDPGEPIRLRNVTVRVDGPAASLK
CCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEECCCHHHHH
SFRVPKSDVLKPGAVLNHGRYEDAKRLIQNQASRYGFFSGRFTSQKLMVDPRAGVADVEL
HCCCCHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEE
IYESGPRYALGKVSFEGDTPFDEDLLQRMVPFKAGEPYDSELIAELNRDLQSSGYFEGVR
EEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
VDAAPTAANNDVIPVDVKLDTRKPRTMGLGLGYSTDVGPRIKANWTRHWVNPQGDSYGWE
EECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCEECCCEEECCCCCCCCCCCE
AELSAPRQNVGLFYDIPLDPPLTDKLRWAGGYQYEDIDGSDTLSKLLTFGPEWHSKLPSG
EECCCCCCCCCEEEECCCCCCCCCHHEECCCCEECCCCCHHHHHHHHHCCCHHHHHCCHH
WQRVISLKWQREEYQLGDDSGLSTLLMPGVSYSYLKSDNRIDPHNGYRLTFESKVAKEGL
HHHHHEEEEEHHHHCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCEEEEEHHHHHHHCC
GSDNNLLYGTALIKGLTTVFDKHRLLGRVQVGGSATNGYKSVPPSLRFFAGGDQSVRGYD
CCCCCEEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC
YQSLSPENSEGDRIGGRYMVAGSVEYQYSIAEKWRVATFVDQGNSFNKLELPNLKTGVGI
CCCCCCCCCCCCCCCCEEEEEECEEEEEEHHHCEEEEEEEECCCCCCEEECCCCCCCCCC
GVRWVSPVGPIRLDLAHALDDDGGIRLHFSMGPEL
CEEEECCCCCEEEEHHHHCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKFPGRFTSGVLMLLTSCAALAQSELDVRIKPSNDELKANIEGYIGSLGDRDEEALQRFS
CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEHHHHHCCCCCCCHHHHHHHH
RGAEEQARKAAQALGYYQPQIESDVKGGEKPRLVLNIDPGEPIRLRNVTVRVDGPAASLK
CCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEECCCHHHHH
SFRVPKSDVLKPGAVLNHGRYEDAKRLIQNQASRYGFFSGRFTSQKLMVDPRAGVADVEL
HCCCCHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEE
IYESGPRYALGKVSFEGDTPFDEDLLQRMVPFKAGEPYDSELIAELNRDLQSSGYFEGVR
EEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
VDAAPTAANNDVIPVDVKLDTRKPRTMGLGLGYSTDVGPRIKANWTRHWVNPQGDSYGWE
EECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCEECCCEEECCCCCCCCCCCE
AELSAPRQNVGLFYDIPLDPPLTDKLRWAGGYQYEDIDGSDTLSKLLTFGPEWHSKLPSG
EECCCCCCCCCEEEECCCCCCCCCHHEECCCCEECCCCCHHHHHHHHHCCCHHHHHCCHH
WQRVISLKWQREEYQLGDDSGLSTLLMPGVSYSYLKSDNRIDPHNGYRLTFESKVAKEGL
HHHHHEEEEEHHHHCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCEEEEEHHHHHHHCC
GSDNNLLYGTALIKGLTTVFDKHRLLGRVQVGGSATNGYKSVPPSLRFFAGGDQSVRGYD
CCCCCEEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC
YQSLSPENSEGDRIGGRYMVAGSVEYQYSIAEKWRVATFVDQGNSFNKLELPNLKTGVGI
CCCCCCCCCCCCCCCCEEEEEECEEEEEEHHHCEEEEEEEECCCCCCEEECCCCCCCCCC
GVRWVSPVGPIRLDLAHALDDDGGIRLHFSMGPEL
CEEEECCCCCEEEEHHHHCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]