Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459859
Identifier: 77459859
GI number: 77459859
Start: 4111930
End: 4113141
Strand: Reverse
Name: 77459859
Synonym: Pfl01_3637
Alternate gene names: NA
Gene position: 4113141-4111930 (Counterclockwise)
Preceding gene: 77459860
Following gene: 77459857
Centisome position: 63.88
GC content: 62.46
Gene sequence:
>1212_bases ATGGCAAACCACTATCGCGAACTCCTGACAACCCCCGGCGCAACCGGGTTGGTGCTCGCGAGCTCCATCGCCCGACTGCC CCAGGCAATGATCGGTATCGGCATCATCACCATGCTGGTGCAGCAGACTGGCGTTTACTGGCTGGCGGGCGCAGTCGCCG GTACGTTTACCCTGGCTAATGCGCTGCTCGGTCCGCGCATCTCGAAACAGGTTGATCGGCGTGGCCAGAGTCGTGTGCTG CCCGTCGTTACGGCCTTCAGTATCGTCATGCTGCTGGCGCTGATTGTTGCCGTGCACCTGAGGGCTCCGGCCGCGTTGTT TTTTGTGCTGGCGGCTCTGGCGGGGACGATGCCGAGCATGCCGTCCATGATCCGCGCACGCTGGACGCAGCTGTTTCGTG GCAAGCCGCAACTGCACACCGCGTTCTCGCTGGACACAGTCCTCACTGAACTGGCTTACATCATCGGCCCGCCACTGGCG ATCGGTTTGAGTGTGAGTTTCTTCGCAGAAGCCGGGCCGCTGGTGGCGGTAGGGTTGCTCGCTGTCGGCGTGACGGCGTT TCTCATGCAGCGGCAGACCGAACCGAAAGTGGTGGCGGGCAACCGGAAAAACAGCGGTTCGACCCTGCTGATTCCCGGCG TTCGCACCATTGTCCTGGCGTTGCTGGCGATGGGGGTTATTGGCGGAGCGATCGATGTTGCCGTTGTGGCCTTCGCCAAT GCGCAAGGCTGGCCATCGGCTGCCACCTTCATTCTTGCCGCCTATGCATTCGGCTCGCTGGTGGCGGGTCTGACCTTCGG CGCGCTGCGGGTTTCGCTGGCGATTGAAAAACAGTTCTTTATCGGGATCCTGGTCACGGCAGTCACCGGCGTATTGCCGG TTTTCTCACCGGACGTTTATGTCCTTACCGCGATGCTGTTTATCGCCGGCATCTCGTTTGCGCCGACCATGGTGGTGGTG ATGAAGCTGGGGTCGATCATTATCCCGGCGGCGAGGATGACCGAAGGACTGACGTGGATGACCACCGGGATCAGCATCGG CGTGGCGCTCGGCGGCATGCTGGCGGGGCTGGTGATTGATGCCTGGGGCGCACGGGCAGGGTTCGGCGTTGCGATAGCCG CAGGTCTGATGATGATGGTTGTGGTGTCGATGGGCCTGCGGACGTTGGCGGCGGCATCGGCGGCGCCTGTTGAGCCAGCC GTTTCGGTCTGA
Upstream 100 bases:
>100_bases GGGCTGGGGTGAGGGATTGCTTTTGACGTTCGCGTAGGTCTTGATGTCGGCAACGCGCTCAGCCGGATGCTGAGCGGCGA CGATTCGGAATGAAGACATC
Downstream 100 bases:
>100_bases TCCGCTATGGAGGCGCTCAGCTTTCAATCTGCCGCAATCGCTTGTACAGCGTATTGCGGCTCACCCCCAACCGCCGCGCC AGGTGGGAAATATTGCCCCC
Product: major facilitator transporter
Products: NA
Alternate protein names: Transmembrane Efflux Protein; Facilitator Superfamily Protein; ABC Transporter Permease Protein; Transmembrane Transporter; ABC Transporter Permease; ABC Transporter; Facilitator Superfamily Transporter Permease; Facilitator Superfamily Permease; MFS Family Transmembrane Protein; ABC Transporter Integral Membrane Protein; MFS Superfamily Transporter; Permease; Mfs Transporter; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; LOW QUALITY PROTEIN MFS Superfamily Transporter; Facilitator MFS1 Protein; Transporter Transmembrane Subunit; Transporter-Like Membrane Protein; Transporter Integral Membrane Protein; Efflux Protein; Integral Membrane Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; MFS Family Transporter; ABC Transporter Membrane Spanning Protein
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MANHYRELLTTPGATGLVLASSIARLPQAMIGIGIITMLVQQTGVYWLAGAVAGTFTLANALLGPRISKQVDRRGQSRVL PVVTAFSIVMLLALIVAVHLRAPAALFFVLAALAGTMPSMPSMIRARWTQLFRGKPQLHTAFSLDTVLTELAYIIGPPLA IGLSVSFFAEAGPLVAVGLLAVGVTAFLMQRQTEPKVVAGNRKNSGSTLLIPGVRTIVLALLAMGVIGGAIDVAVVAFAN AQGWPSAATFILAAYAFGSLVAGLTFGALRVSLAIEKQFFIGILVTAVTGVLPVFSPDVYVLTAMLFIAGISFAPTMVVV MKLGSIIIPAARMTEGLTWMTTGISIGVALGGMLAGLVIDAWGARAGFGVAIAAGLMMMVVVSMGLRTLAAASAAPVEPA VSV
Sequences:
>Translated_403_residues MANHYRELLTTPGATGLVLASSIARLPQAMIGIGIITMLVQQTGVYWLAGAVAGTFTLANALLGPRISKQVDRRGQSRVL PVVTAFSIVMLLALIVAVHLRAPAALFFVLAALAGTMPSMPSMIRARWTQLFRGKPQLHTAFSLDTVLTELAYIIGPPLA IGLSVSFFAEAGPLVAVGLLAVGVTAFLMQRQTEPKVVAGNRKNSGSTLLIPGVRTIVLALLAMGVIGGAIDVAVVAFAN AQGWPSAATFILAAYAFGSLVAGLTFGALRVSLAIEKQFFIGILVTAVTGVLPVFSPDVYVLTAMLFIAGISFAPTMVVV MKLGSIIIPAARMTEGLTWMTTGISIGVALGGMLAGLVIDAWGARAGFGVAIAAGLMMMVVVSMGLRTLAAASAAPVEPA VSV >Mature_402_residues ANHYRELLTTPGATGLVLASSIARLPQAMIGIGIITMLVQQTGVYWLAGAVAGTFTLANALLGPRISKQVDRRGQSRVLP VVTAFSIVMLLALIVAVHLRAPAALFFVLAALAGTMPSMPSMIRARWTQLFRGKPQLHTAFSLDTVLTELAYIIGPPLAI GLSVSFFAEAGPLVAVGLLAVGVTAFLMQRQTEPKVVAGNRKNSGSTLLIPGVRTIVLALLAMGVIGGAIDVAVVAFANA QGWPSAATFILAAYAFGSLVAGLTFGALRVSLAIEKQFFIGILVTAVTGVLPVFSPDVYVLTAMLFIAGISFAPTMVVVM KLGSIIIPAARMTEGLTWMTTGISIGVALGGMLAGLVIDAWGARAGFGVAIAAGLMMMVVVSMGLRTLAAASAAPVEPAV SV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41540; Mature: 41408
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANHYRELLTTPGATGLVLASSIARLPQAMIGIGIITMLVQQTGVYWLAGAVAGTFTLAN CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ALLGPRISKQVDRRGQSRVLPVVTAFSIVMLLALIVAVHLRAPAALFFVLAALAGTMPSM HHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC PSMIRARWTQLFRGKPQLHTAFSLDTVLTELAYIIGPPLAIGLSVSFFAEAGPLVAVGLL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH AVGVTAFLMQRQTEPKVVAGNRKNSGSTLLIPGVRTIVLALLAMGVIGGAIDVAVVAFAN HHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC AQGWPSAATFILAAYAFGSLVAGLTFGALRVSLAIEKQFFIGILVTAVTGVLPVFSPDVY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLTAMLFIAGISFAPTMVVVMKLGSIIIPAARMTEGLTWMTTGISIGVALGGMLAGLVID HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHH AWGARAGFGVAIAAGLMMMVVVSMGLRTLAAASAAPVEPAVSV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ANHYRELLTTPGATGLVLASSIARLPQAMIGIGIITMLVQQTGVYWLAGAVAGTFTLAN CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ALLGPRISKQVDRRGQSRVLPVVTAFSIVMLLALIVAVHLRAPAALFFVLAALAGTMPSM HHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC PSMIRARWTQLFRGKPQLHTAFSLDTVLTELAYIIGPPLAIGLSVSFFAEAGPLVAVGLL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH AVGVTAFLMQRQTEPKVVAGNRKNSGSTLLIPGVRTIVLALLAMGVIGGAIDVAVVAFAN HHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC AQGWPSAATFILAAYAFGSLVAGLTFGALRVSLAIEKQFFIGILVTAVTGVLPVFSPDVY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLTAMLFIAGISFAPTMVVVMKLGSIIIPAARMTEGLTWMTTGISIGVALGGMLAGLVID HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHH AWGARAGFGVAIAAGLMMMVVVSMGLRTLAAASAAPVEPAVSV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA