| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459759
Identifier: 77459759
GI number: 77459759
Start: 4014353
End: 4014793
Strand: Direct
Name: 77459759
Synonym: Pfl01_3537
Alternate gene names: NA
Gene position: 4014353-4014793 (Clockwise)
Preceding gene: 77459757
Following gene: 77459761
Centisome position: 62.35
GC content: 61.9
Gene sequence:
>441_bases ATGAGTCAGTTTCTCAGCATGTTCAACAGTGTCGGTTCCCAGGCGTTCAGCCAGATGGCCTGCCAGGTCGCGCCGTACTT CAGCACCATCAACCCGCTGGTGACCGAGTTGCGGGCAGGTTCGGCGCAGGTGCAGGTGCCGTTTCGCCGCGAGATCACCA ACCATCTCGGCACCGTGCATGCCATCGCCCTGTGCAATGCCGCCGAACTGGCAGCCGGGATGATGACCGACGTGTCGATT CCCGCCGGCGCACGCTGGATTCCCAAGGGCATGACCGTCGAATACCTGGCCAAGGCCAAGACCGACGTGACCGCCGTGGC CAATGGTGAAGGGCTGGACTGGCAGACCGAAGGCGACAAGATCGTGCCGGTGGATGTCCACGACGCCGAAGGCAAGAAAG TGTTCACGGCGCGGATCACCATGAACGTGAAACTGTCCTGA
Upstream 100 bases:
>100_bases GGTTGACAGATTTCCCGCGAACAGAATACCGTTCCGTTACAGAACAATATTCTGTAACGGAATATGATTCTGTAAATACC CTAACCGCGAGGCTTCACCC
Downstream 100 bases:
>100_bases TATCACCGGCACAAAAAAGCCCTTGCTGCGCAGATCGCAACAAGGGCTTTTGTCGTTTCAAAGAGAAAGAATCAGTGAAC GGTCAGGCGCTGGCGGACAA
Product: phenylacetic acid degradation-like protein
Products: NA
Alternate protein names: Thioesterase; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily Protein
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSQFLSMFNSVGSQAFSQMACQVAPYFSTINPLVTELRAGSAQVQVPFRREITNHLGTVHAIALCNAAELAAGMMTDVSI PAGARWIPKGMTVEYLAKAKTDVTAVANGEGLDWQTEGDKIVPVDVHDAEGKKVFTARITMNVKLS
Sequences:
>Translated_146_residues MSQFLSMFNSVGSQAFSQMACQVAPYFSTINPLVTELRAGSAQVQVPFRREITNHLGTVHAIALCNAAELAAGMMTDVSI PAGARWIPKGMTVEYLAKAKTDVTAVANGEGLDWQTEGDKIVPVDVHDAEGKKVFTARITMNVKLS >Mature_145_residues SQFLSMFNSVGSQAFSQMACQVAPYFSTINPLVTELRAGSAQVQVPFRREITNHLGTVHAIALCNAAELAAGMMTDVSIP AGARWIPKGMTVEYLAKAKTDVTAVANGEGLDWQTEGDKIVPVDVHDAEGKKVFTARITMNVKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15687; Mature: 15556
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFLSMFNSVGSQAFSQMACQVAPYFSTINPLVTELRAGSAQVQVPFRREITNHLGTVH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH AIALCNAAELAAGMMTDVSIPAGARWIPKGMTVEYLAKAKTDVTAVANGEGLDWQTEGDK HHHHHCHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHCCCCEEEEECCCCCCEECCCCE IVPVDVHDAEGKKVFTARITMNVKLS EEEEECCCCCCCEEEEEEEEEEEEEC >Mature Secondary Structure SQFLSMFNSVGSQAFSQMACQVAPYFSTINPLVTELRAGSAQVQVPFRREITNHLGTVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH AIALCNAAELAAGMMTDVSIPAGARWIPKGMTVEYLAKAKTDVTAVANGEGLDWQTEGDK HHHHHCHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHCCCCEEEEECCCCCCEECCCCE IVPVDVHDAEGKKVFTARITMNVKLS EEEEECCCCCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA