| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459714
Identifier: 77459714
GI number: 77459714
Start: 3973458
End: 3973994
Strand: Direct
Name: 77459714
Synonym: Pfl01_3492
Alternate gene names: NA
Gene position: 3973458-3973994 (Clockwise)
Preceding gene: 77459713
Following gene: 255961271
Centisome position: 61.71
GC content: 45.44
Gene sequence:
>537_bases ATGACACTGACAATCAGGAAACACGATAAACAAGAACTTCAAGCCTACATCGACGCTGAGCTAGCTTGCTATGCCATCCG TCTTGATGGAGTTGATATTGATACAAGCGCCCAACCCGATACTCTCGGCAACTTCCCACGCAAACATTTTCTAGGTGCAA TTGAACAGATTGTTGGACGAAACTTGTTCTTTGCGATGAGCATCCTTCAAGAACGTCTTGAACAAGGCTACAAAATCTTC CTGAGTCACACCTGTACACCAGACATTACCCATACTGGGGCAGGCGTTTTGTATGTCACTAAGCCTGAAGCCCTACAAGA TAAAGATAAAGCTAAGATCATTACCGAAGTGACAGCCACGTATGAAGCAGACATTGACGCACACAACGACAAAGTGTTTG AGCAAGAACGAGCAGCAATGTTGATTGAAGAAGAAGAAGCTCGTAAAGCTGTTCTAGCTGAAGAAGCCCGTAAGGTTGAA GCAGACATTGAGAAGCGCGTTCAACAACGTCTACGTGGCATGAGAGGGGCTAAGTGA
Upstream 100 bases:
>100_bases TGGACTTCTTCAATGTAGATACCAGAGTTGCAACCAGCTCAACAGTTATTTTTGACAACACCCGAATCAACCCAATCCCA GAATACAAGGAAAACAAATA
Downstream 100 bases:
>100_bases TGACTAACTATATCTACATCCAAGAAGTGACCATCAGTAAATTCCTTTCCGAAGTTGTCGAGCATTTGGCCCAAGGCTAC ACACTGACTGAAGAGTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTLTIRKHDKQELQAYIDAELACYAIRLDGVDIDTSAQPDTLGNFPRKHFLGAIEQIVGRNLFFAMSILQERLEQGYKIF LSHTCTPDITHTGAGVLYVTKPEALQDKDKAKIITEVTATYEADIDAHNDKVFEQERAAMLIEEEEARKAVLAEEARKVE ADIEKRVQQRLRGMRGAK
Sequences:
>Translated_178_residues MTLTIRKHDKQELQAYIDAELACYAIRLDGVDIDTSAQPDTLGNFPRKHFLGAIEQIVGRNLFFAMSILQERLEQGYKIF LSHTCTPDITHTGAGVLYVTKPEALQDKDKAKIITEVTATYEADIDAHNDKVFEQERAAMLIEEEEARKAVLAEEARKVE ADIEKRVQQRLRGMRGAK >Mature_177_residues TLTIRKHDKQELQAYIDAELACYAIRLDGVDIDTSAQPDTLGNFPRKHFLGAIEQIVGRNLFFAMSILQERLEQGYKIFL SHTCTPDITHTGAGVLYVTKPEALQDKDKAKIITEVTATYEADIDAHNDKVFEQERAAMLIEEEEARKAVLAEEARKVEA DIEKRVQQRLRGMRGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20161; Mature: 20030
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTIRKHDKQELQAYIDAELACYAIRLDGVDIDTSAQPDTLGNFPRKHFLGAIEQIVGR CEEEECCCCHHHHHHHHCHHHEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC NLFFAMSILQERLEQGYKIFLSHTCTPDITHTGAGVLYVTKPEALQDKDKAKIITEVTAT HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHH YEADIDAHNDKVFEQERAAMLIEEEEARKAVLAEEARKVEADIEKRVQQRLRGMRGAK HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLTIRKHDKQELQAYIDAELACYAIRLDGVDIDTSAQPDTLGNFPRKHFLGAIEQIVGR EEEECCCCHHHHHHHHCHHHEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC NLFFAMSILQERLEQGYKIFLSHTCTPDITHTGAGVLYVTKPEALQDKDKAKIITEVTAT HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHH YEADIDAHNDKVFEQERAAMLIEEEEARKAVLAEEARKVEADIEKRVQQRLRGMRGAK HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA