| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459712
Identifier: 77459712
GI number: 77459712
Start: 3972806
End: 3973078
Strand: Direct
Name: 77459712
Synonym: Pfl01_3490
Alternate gene names: NA
Gene position: 3972806-3973078 (Clockwise)
Preceding gene: 77459711
Following gene: 77459713
Centisome position: 61.7
GC content: 43.22
Gene sequence:
>273_bases ATGACAGACGTACAAGCCCTAAAAGACGAAGCCCTTTATAAGTATGAGAAGCAAGGCAAGTTTGAAGTGATTTACACCAA CTTCCATGTAGACATGTTCAGACGATACGACGAATTGATTAGCCAAGGATACAAGCGTGCCCCTGATCCTTACATCACAG CTTCTAACATGAACTGGTCTGTTGTGCAGGTGGTTCATATGGAGAAGCCTGCAAAGCTACAGGAACAAGAACTCAAAGCA ATCTATGCAGCAATTGACGCTGACAACCAATAA
Upstream 100 bases:
>100_bases CTTACACATTCCTGAAGAATAACCGCTTCCCTGATGATGGGTTTGATGAAGAGCTTCAAGAGTATCAACAACTATGTACT GAAAAAGGAATCGAGTTTTA
Downstream 100 bases:
>100_bases TCCCTTTACGCAATACCAACAAGGAAAACAAAAAAAAAATGAGCATCACCGAATACGCACAAGAATCCATAAGCCTCCTT ACGCCCTTTGTAGCCCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTDVQALKDEALYKYEKQGKFEVIYTNFHVDMFRRYDELISQGYKRAPDPYITASNMNWSVVQVVHMEKPAKLQEQELKA IYAAIDADNQ
Sequences:
>Translated_90_residues MTDVQALKDEALYKYEKQGKFEVIYTNFHVDMFRRYDELISQGYKRAPDPYITASNMNWSVVQVVHMEKPAKLQEQELKA IYAAIDADNQ >Mature_89_residues TDVQALKDEALYKYEKQGKFEVIYTNFHVDMFRRYDELISQGYKRAPDPYITASNMNWSVVQVVHMEKPAKLQEQELKAI YAAIDADNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10579; Mature: 10448
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVQALKDEALYKYEKQGKFEVIYTNFHVDMFRRYDELISQGYKRAPDPYITASNMNWS CCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEE VVQVVHMEKPAKLQEQELKAIYAAIDADNQ EEEEEECCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDVQALKDEALYKYEKQGKFEVIYTNFHVDMFRRYDELISQGYKRAPDPYITASNMNWS CCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEE VVQVVHMEKPAKLQEQELKAIYAAIDADNQ EEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA