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The map label for this gene is 77459034

Identifier: 77459034

GI number: 77459034

Start: 3235948

End: 3237486

Strand: Direct

Name: 77459034

Synonym: Pfl01_2809

Alternate gene names: NA

Gene position: 3235948-3237486 (Clockwise)

Preceding gene: 77459033

Following gene: 77459035

Centisome position: 50.26

GC content: 59.26

Gene sequence:

>1539_bases
ATGAACGTTACCCGCCGCTTGTGTCTGGTACTGGGCGACCAGTTGTCGTTCGATCTGGCTTCATTACATGCACTCGACGC
CGAGCGCGACACCGTGTTGCTGGTTGAAGTCATGGAAGAAGCCAGTCATGTGCCCCACCATCCACAAAAGATTGCCCTGA
TCTTCAGCGCCATGCGCCATTTCGCCCAGGCGTTGCGGGATCAGGGTACGCGGGTTGAATACGTGACCCTGGATGATCCC
GATAACAGCGGTTCGGTGCCCGGTGAGCTGAAGCGCTGGCAAGCGTTGTTGCAGGCCGAGCAAGTGCACATCACCGAGTG
TGGCGACTGGCGACTGGAGCACTCGATCAAGGAATGCGGTTTGCCCATCCACTGGCACGCCGATACGCGTTTTCTGTGCA
GTCGCGAAGAATTTGCCGCATGGGCCGAGGGCAAAAAACAGCTGCGCATGGAGTTTTTCTACCGGGAGATGCGTCGCAAG
AGCCGCTTGCTGCTCAATGGTGACGGCTCACCAGTGGGCGGCGCGTGGAACTTCGATGCCGAGAATCGCAAGGCCCTGCC
CAAGGGCGTCAAAGCGCCCTACCCGGTACGCTTCAAAAACGACGCCATCACCCGCGATGTACTGGCACTGGTCAAGGCGC
GCTTCAGCCAGCACTACGGCGCGCTCGATGACTTCAACTATCCCGTCACCCATGCCGATGCGCAGGCACTCTGGGCGTAT
TTTCTTGATTATGGCCTGGCGGGGTTTGGCGATTACCAGGACGCAATGGCCAGTGAAGAGCCGTTTCTGTTTCATGCGCG
CATCAGTGCGGCGCTCAACATCGGCCTGCTGGATCTGCGTCAGCTGTGCAGCGATGTGGAGTCGGCATACTGGGCCGGCA
GCGTTGCGCTCAATGCCGCCGAAGGCTTCATCCGGCAACTGATTGGCTGGCGGGAATATGTGCGGGGCGTGTATTGGCTG
AAAATGCCGGATTACGCACTGGGCAACTCGTTCGGCAACAGCCGGCCACTGCCCGAGTTCTACTGGACGGGTGATACCCA
GATGAACTGCATGCGCCACGCCATCGGGCAAAGCTTGCAACACGCCTACGCGCATCACATCCAGCGACTGATGGTCACCG
GCAATTTCGCCCTGCTCGCCGGCATCGCGCCGAGCCAGATCTGCGAGTGGTATCTGGCGATCTACATGGACGCCTTTGAC
TGGGTCGAACTGCCCAACACGCTAGGCATGGTCATGCATGCCGATGGCGGTTATCTCGGTTCCAAACCCTATTGCGCCAG
CGGCCAGTACATCAATCGCATGTCGGATTACTGCCGCGGTTGCGCGTACAAGGTCAGCGAAAGCACGGCGGACAATGCCT
GCCCGTTCAATGCGCTGTATTGGCATTTCCTGATGCGCCACGGTGAGCTGCTGCGCGGCAATCAGCGCATGAGCATGATG
TACAGGAACCTCGACCGCATGCCGGAAACCAAACAACAGGCACTCTGGCAACGCGGCCAGGCATTGTTGGCGCGGCTGGA
TAACGGCGAATCGTTTTGA

Upstream 100 bases:

>100_bases
ATGTCCAAGTTCGGGGTGGAAGTCGGTCAGGTGACTTTGTTCTTCCGCCGCCAAGGCCCCGAATCAAGCCAATGAACCGT
AAAACGCAGAGCTCCATTGA

Downstream 100 bases:

>100_bases
AATCAGTGCTAGCCCGATACGACCTTGCTCCATCAGTGAAACTTAACGACGAAGCAACCTGTCAACGGATCAGCAGCCAC
AACGCTTCCCGATATTGACT

Product: deoxyribodipyrimidine photolyase-like protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MNVTRRLCLVLGDQLSFDLASLHALDAERDTVLLVEVMEEASHVPHHPQKIALIFSAMRHFAQALRDQGTRVEYVTLDDP
DNSGSVPGELKRWQALLQAEQVHITECGDWRLEHSIKECGLPIHWHADTRFLCSREEFAAWAEGKKQLRMEFFYREMRRK
SRLLLNGDGSPVGGAWNFDAENRKALPKGVKAPYPVRFKNDAITRDVLALVKARFSQHYGALDDFNYPVTHADAQALWAY
FLDYGLAGFGDYQDAMASEEPFLFHARISAALNIGLLDLRQLCSDVESAYWAGSVALNAAEGFIRQLIGWREYVRGVYWL
KMPDYALGNSFGNSRPLPEFYWTGDTQMNCMRHAIGQSLQHAYAHHIQRLMVTGNFALLAGIAPSQICEWYLAIYMDAFD
WVELPNTLGMVMHADGGYLGSKPYCASGQYINRMSDYCRGCAYKVSESTADNACPFNALYWHFLMRHGELLRGNQRMSMM
YRNLDRMPETKQQALWQRGQALLARLDNGESF

Sequences:

>Translated_512_residues
MNVTRRLCLVLGDQLSFDLASLHALDAERDTVLLVEVMEEASHVPHHPQKIALIFSAMRHFAQALRDQGTRVEYVTLDDP
DNSGSVPGELKRWQALLQAEQVHITECGDWRLEHSIKECGLPIHWHADTRFLCSREEFAAWAEGKKQLRMEFFYREMRRK
SRLLLNGDGSPVGGAWNFDAENRKALPKGVKAPYPVRFKNDAITRDVLALVKARFSQHYGALDDFNYPVTHADAQALWAY
FLDYGLAGFGDYQDAMASEEPFLFHARISAALNIGLLDLRQLCSDVESAYWAGSVALNAAEGFIRQLIGWREYVRGVYWL
KMPDYALGNSFGNSRPLPEFYWTGDTQMNCMRHAIGQSLQHAYAHHIQRLMVTGNFALLAGIAPSQICEWYLAIYMDAFD
WVELPNTLGMVMHADGGYLGSKPYCASGQYINRMSDYCRGCAYKVSESTADNACPFNALYWHFLMRHGELLRGNQRMSMM
YRNLDRMPETKQQALWQRGQALLARLDNGESF
>Mature_512_residues
MNVTRRLCLVLGDQLSFDLASLHALDAERDTVLLVEVMEEASHVPHHPQKIALIFSAMRHFAQALRDQGTRVEYVTLDDP
DNSGSVPGELKRWQALLQAEQVHITECGDWRLEHSIKECGLPIHWHADTRFLCSREEFAAWAEGKKQLRMEFFYREMRRK
SRLLLNGDGSPVGGAWNFDAENRKALPKGVKAPYPVRFKNDAITRDVLALVKARFSQHYGALDDFNYPVTHADAQALWAY
FLDYGLAGFGDYQDAMASEEPFLFHARISAALNIGLLDLRQLCSDVESAYWAGSVALNAAEGFIRQLIGWREYVRGVYWL
KMPDYALGNSFGNSRPLPEFYWTGDTQMNCMRHAIGQSLQHAYAHHIQRLMVTGNFALLAGIAPSQICEWYLAIYMDAFD
WVELPNTLGMVMHADGGYLGSKPYCASGQYINRMSDYCRGCAYKVSESTADNACPFNALYWHFLMRHGELLRGNQRMSMM
YRNLDRMPETKQQALWQRGQALLARLDNGESF

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58354; Mature: 58354

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTRRLCLVLGDQLSFDLASLHALDAERDTVLLVEVMEEASHVPHHPQKIALIFSAMRH
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FAQALRDQGTRVEYVTLDDPDNSGSVPGELKRWQALLQAEQVHITECGDWRLEHSIKECG
HHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCC
LPIHWHADTRFLCSREEFAAWAEGKKQLRMEFFYREMRRKSRLLLNGDGSPVGGAWNFDA
CCEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEECCCC
ENRKALPKGVKAPYPVRFKNDAITRDVLALVKARFSQHYGALDDFNYPVTHADAQALWAY
CCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
FLDYGLAGFGDYQDAMASEEPFLFHARISAALNIGLLDLRQLCSDVESAYWAGSVALNAA
HHHHCCCCCCCHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH
EGFIRQLIGWREYVRGVYWLKMPDYALGNSFGNSRPLPEFYWTGDTQMNCMRHAIGQSLQ
HHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
HAYAHHIQRLMVTGNFALLAGIAPSQICEWYLAIYMDAFDWVELPNTLGMVMHADGGYLG
HHHHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHCCCHHCEEEECCCCCCC
SKPYCASGQYINRMSDYCRGCAYKVSESTADNACPFNALYWHFLMRHGELLRGNQRMSMM
CCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHH
YRNLDRMPETKQQALWQRGQALLARLDNGESF
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNVTRRLCLVLGDQLSFDLASLHALDAERDTVLLVEVMEEASHVPHHPQKIALIFSAMRH
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FAQALRDQGTRVEYVTLDDPDNSGSVPGELKRWQALLQAEQVHITECGDWRLEHSIKECG
HHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCC
LPIHWHADTRFLCSREEFAAWAEGKKQLRMEFFYREMRRKSRLLLNGDGSPVGGAWNFDA
CCEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEECCCC
ENRKALPKGVKAPYPVRFKNDAITRDVLALVKARFSQHYGALDDFNYPVTHADAQALWAY
CCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
FLDYGLAGFGDYQDAMASEEPFLFHARISAALNIGLLDLRQLCSDVESAYWAGSVALNAA
HHHHCCCCCCCHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH
EGFIRQLIGWREYVRGVYWLKMPDYALGNSFGNSRPLPEFYWTGDTQMNCMRHAIGQSLQ
HHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
HAYAHHIQRLMVTGNFALLAGIAPSQICEWYLAIYMDAFDWVELPNTLGMVMHADGGYLG
HHHHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHCCCHHCEEEECCCCCCC
SKPYCASGQYINRMSDYCRGCAYKVSESTADNACPFNALYWHFLMRHGELLRGNQRMSMM
CCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHH
YRNLDRMPETKQQALWQRGQALLARLDNGESF
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA