| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gnl [H]
Identifier: 77459028
GI number: 77459028
Start: 3229601
End: 3230719
Strand: Direct
Name: gnl [H]
Synonym: Pfl01_2803
Alternate gene names: 77459028
Gene position: 3229601-3230719 (Clockwise)
Preceding gene: 77459017
Following gene: 77459030
Centisome position: 50.16
GC content: 59.25
Gene sequence:
>1119_bases ATGGACTCATCCCTGTCCGCCAAGCCTGAAAGCCTCGAACAGGTATACGGCAATACCCGCCGCAGCTTCCTGAAAAAATC CCTCGCTGTTTCTGCCACTCTCGCCACCGGCAGCGCCTTACTGCCCACCCTGTCTGAAGCCGCCGAACCCTTGAGTCAGC GCTACCCGGATCCCCTGATTCACATCCTCGATGACAGCTTCCTCGACCTGCGTGTTTTCAACGCCAGTGTGGAAAAACTT GCCACCGGGATGCGCTGGGCCGAAGGACCGGTCTGGATCGGTGATGGCCGCTACTTGCTGGTCAGCGACATCCCCAATAA TCGCATTATGCGCTGGGATGAAATCACCGAGACCTTCACCGTCTACCGTGAGCACTCGAACTTCTCCAACGGGATGTGCC GGGATCGCCAAGGGCGGCTTATCGTCTGCGAAGGCTCTACCACCACAAGCGAAGGCCGCCGCATCACGCGCACCGAATAC AACGGCACGACCACCGTGCTGGCCGACAGCTTCGAGGGCAAGCCCTTCAACTCGCCCAACGACATCGTCTGCAAAAGTGA CGGATCGATCTGGTTTACCGATCCGCCATTCCAGACCGGCAACAACTACGAAGGCCACAAAATCACCCCGAGCCAACCCC ACGCCGTTTACCGCATCGACGGTGAGAGCAGAAAGGTCACTCGGGTCATCGACGACCTGAACGGCCCCAATGGTCTGTGC TTTTCTCCCGACGAGAAGACCCTGTATGTCGTCGAAGGCCGCGCCAAACCCAATCGCTTGATCTGGGCAATTGCCGTGAA GGACGACGGCACACTGGGCGAGCGCCGCAAGCACATCGAGGGGCTGGACTATGCGGCAATCGACGGTATCAAGTGCGACG AAACGGGCAACCTGTGGTGCGGCTGGGGCGGCAATGGAGATCCCAGGGCCGACCTGGAAAAACTCGACGGCGTGCGGGTT TTCAACCCACAGGGCAAGGCCATCGGCCATATTTCGCTGCCAGAGCGCTGCCCGAACCTGTGCTTCGGGGGGCGCGAAGG GAACAGGCTGTTCATGGCAAGCAGTCACTCGATCTACTCGCTTTTTGTGAATACTCGCGGGACTACGTTTGCATTGTGA
Upstream 100 bases:
>100_bases CAAGCCCTGTCAGGGTTGGAAAATGATTAACTTGTACGATGTCCTATCACGGGATATTACTAAGTCTCCTCAAAAAAAAT AAAACCACGGAGATCGCTAC
Downstream 100 bases:
>100_bases GCACGCCGTTGTGCTCTTGATCGCTTGCTGAGTCTCGAAACACTATCTTGCCGCGCAACCGGGGATGCGCGGCATTCAAT CCTTGCAGTCCCCTGCCTCA
Product: gluconolactonase
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MDSSLSAKPESLEQVYGNTRRSFLKKSLAVSATLATGSALLPTLSEAAEPLSQRYPDPLIHILDDSFLDLRVFNASVEKL ATGMRWAEGPVWIGDGRYLLVSDIPNNRIMRWDEITETFTVYREHSNFSNGMCRDRQGRLIVCEGSTTTSEGRRITRTEY NGTTTVLADSFEGKPFNSPNDIVCKSDGSIWFTDPPFQTGNNYEGHKITPSQPHAVYRIDGESRKVTRVIDDLNGPNGLC FSPDEKTLYVVEGRAKPNRLIWAIAVKDDGTLGERRKHIEGLDYAAIDGIKCDETGNLWCGWGGNGDPRADLEKLDGVRV FNPQGKAIGHISLPERCPNLCFGGREGNRLFMASSHSIYSLFVNTRGTTFAL
Sequences:
>Translated_372_residues MDSSLSAKPESLEQVYGNTRRSFLKKSLAVSATLATGSALLPTLSEAAEPLSQRYPDPLIHILDDSFLDLRVFNASVEKL ATGMRWAEGPVWIGDGRYLLVSDIPNNRIMRWDEITETFTVYREHSNFSNGMCRDRQGRLIVCEGSTTTSEGRRITRTEY NGTTTVLADSFEGKPFNSPNDIVCKSDGSIWFTDPPFQTGNNYEGHKITPSQPHAVYRIDGESRKVTRVIDDLNGPNGLC FSPDEKTLYVVEGRAKPNRLIWAIAVKDDGTLGERRKHIEGLDYAAIDGIKCDETGNLWCGWGGNGDPRADLEKLDGVRV FNPQGKAIGHISLPERCPNLCFGGREGNRLFMASSHSIYSLFVNTRGTTFAL >Mature_372_residues MDSSLSAKPESLEQVYGNTRRSFLKKSLAVSATLATGSALLPTLSEAAEPLSQRYPDPLIHILDDSFLDLRVFNASVEKL ATGMRWAEGPVWIGDGRYLLVSDIPNNRIMRWDEITETFTVYREHSNFSNGMCRDRQGRLIVCEGSTTTSEGRRITRTEY NGTTTVLADSFEGKPFNSPNDIVCKSDGSIWFTDPPFQTGNNYEGHKITPSQPHAVYRIDGESRKVTRVIDDLNGPNGLC FSPDEKTLYVVEGRAKPNRLIWAIAVKDDGTLGERRKHIEGLDYAAIDGIKCDETGNLWCGWGGNGDPRADLEKLDGVRV FNPQGKAIGHISLPERCPNLCFGGREGNRLFMASSHSIYSLFVNTRGTTFAL
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 41263; Mature: 41263
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSLSAKPESLEQVYGNTRRSFLKKSLAVSATLATGSALLPTLSEAAEPLSQRYPDPLI CCCCCCCCHHHHHHHHCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCEE HILDDSFLDLRVFNASVEKLATGMRWAEGPVWIGDGRYLLVSDIPNNRIMRWDEITETFT EECCCCCEEEEEECHHHHHHHHCCEECCCCEEECCCCEEEEEECCCCCEEEHHHHHHEEE VYREHSNFSNGMCRDRQGRLIVCEGSTTTSEGRRITRTEYNGTTTVLADSFEGKPFNSPN EEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCC DIVCKSDGSIWFTDPPFQTGNNYEGHKITPSQPHAVYRIDGESRKVTRVIDDLNGPNGLC CEEEECCCCEEECCCCCCCCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHCCCCCCCE FSPDEKTLYVVEGRAKPNRLIWAIAVKDDGTLGERRKHIEGLDYAAIDGIKCDETGNLWC ECCCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHCCCCEEEECCEEECCCCCEEE GWGGNGDPRADLEKLDGVRVFNPQGKAIGHISLPERCPNLCFGGREGNRLFMASSHSIYS ECCCCCCCCHHHHHCCCEEEECCCCCEEEECCCHHHCCCCEECCCCCCEEEEEECCCEEE LFVNTRGTTFAL EEEECCCCEEEC >Mature Secondary Structure MDSSLSAKPESLEQVYGNTRRSFLKKSLAVSATLATGSALLPTLSEAAEPLSQRYPDPLI CCCCCCCCHHHHHHHHCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCEE HILDDSFLDLRVFNASVEKLATGMRWAEGPVWIGDGRYLLVSDIPNNRIMRWDEITETFT EECCCCCEEEEEECHHHHHHHHCCEECCCCEEECCCCEEEEEECCCCCEEEHHHHHHEEE VYREHSNFSNGMCRDRQGRLIVCEGSTTTSEGRRITRTEYNGTTTVLADSFEGKPFNSPN EEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCC DIVCKSDGSIWFTDPPFQTGNNYEGHKITPSQPHAVYRIDGESRKVTRVIDDLNGPNGLC CEEEECCCCEEECCCCCCCCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHCCCCCCCE FSPDEKTLYVVEGRAKPNRLIWAIAVKDDGTLGERRKHIEGLDYAAIDGIKCDETGNLWC ECCCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHCCCCEEEECCEEECCCCCEEE GWGGNGDPRADLEKLDGVRVFNPQGKAIGHISLPERCPNLCFGGREGNRLFMASSHSIYS ECCCCCCCCHHHHHCCCEEEECCCCCEEEECCCHHHCCCCEECCCCCCEEEEEECCCEEE LFVNTRGTTFAL EEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]