Click here to switch to the map view.

The map label for this gene is yneE [H]

Identifier: 77459010

GI number: 77459010

Start: 3211142

End: 3212044

Strand: Direct

Name: yneE [H]

Synonym: Pfl01_2785

Alternate gene names: 77459010

Gene position: 3211142-3212044 (Clockwise)

Preceding gene: 77459009

Following gene: 77459016

Centisome position: 49.87

GC content: 59.14

Gene sequence:

>903_bases
TTGAAAGCTGCCATCGTCAAAAAATACCGCCTGATCATCAAGACCCTGGGCTACGTGGGCTGGTCTCTGTTCTGGTTGCT
GCTGTGGGACATCGCCGTCACCGTCGACTTCATGCTGTTCCTCAACGCCAAGCTGAACCTGCCGCTGATGCCGCTGACCT
TGCTCGGTTCGGCGTTGATCGTATTGATCAGTTTTCGCAACAGCAGCGCCTACAACCGCTGGTGGGAAGCGCGGACGTTG
TGGGGGGCGATGATCAACAACTCCCGCAGCTTCGCCCGGCAGGTGCTGACGCTGCTGGACGATGCCGGCGGCGAGGTGAA
TCCGGTCAAATCCACTCTGCTGCGCCGCCACGTCGCGTATGTGAACTGCCTCGCCGCGCATCTGCAAGGCCAGCCTTGTC
CCGACGAGGTGCGGGCGTTTATTCCCGCCGAAGAGTTCGCCCGCAGTGGCACGACCAATAACTTTGCCAACGATATCCTC
ACCGGCTCCGCGACTTTGCTCGCCAAGGAATACAAGGCCGGGCATCTGGACAGTATTCGCCTGGCGCGGCTTGAGTCGAC
GCTGGTCGACCTGTCCAACAGTCAGGGCGGCATGGAGCGGATCGCCAATACCCCGCTGCCCTACCCTTACGTCTATTTTC
CGCGGCTGTTTATTTCGCTGTTCTGCCTGATCGTACCGGTGGGACTGGTCGAATCCCTGGGCTGGTTCACGCCGCTGGCG
TCGACCGTGGTGGGATTCATGCTGCTGGCCATCGAACGCATCGGCACCGATCTGCAAAGCCCGTTTCGCCACAGCGAACA
CCAGATTCAAATGGAAGCACTGTGCGAAACCATTGAAAAGAACTTGCAGTCGATGCAACGTGATTCGTTGGGTGATGTGC
GCAGGCTTGAAGAGCAGGCTTGA

Upstream 100 bases:

>100_bases
CAGATTGACTGACGGTTGGCTGCTTCACCAGGGAACTGCCGGTGCCAGGCATCGTCCGAGCTTAAGCGTTTAAGCAAACT
GCTCGCCACGAGGTTTCCGT

Downstream 100 bases:

>100_bases
GGCGCTGCTTTAGCAGCAGTGTGATAGCGGGTCTCCCCTTTTCTTTATCAGGTGCAGAGCGACTATTGATGAGAAGAGCG
GATTAACTGACCTGGGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKAAIVKKYRLIIKTLGYVGWSLFWLLLWDIAVTVDFMLFLNAKLNLPLMPLTLLGSALIVLISFRNSSAYNRWWEARTL
WGAMINNSRSFARQVLTLLDDAGGEVNPVKSTLLRRHVAYVNCLAAHLQGQPCPDEVRAFIPAEEFARSGTTNNFANDIL
TGSATLLAKEYKAGHLDSIRLARLESTLVDLSNSQGGMERIANTPLPYPYVYFPRLFISLFCLIVPVGLVESLGWFTPLA
STVVGFMLLAIERIGTDLQSPFRHSEHQIQMEALCETIEKNLQSMQRDSLGDVRRLEEQA

Sequences:

>Translated_300_residues
MKAAIVKKYRLIIKTLGYVGWSLFWLLLWDIAVTVDFMLFLNAKLNLPLMPLTLLGSALIVLISFRNSSAYNRWWEARTL
WGAMINNSRSFARQVLTLLDDAGGEVNPVKSTLLRRHVAYVNCLAAHLQGQPCPDEVRAFIPAEEFARSGTTNNFANDIL
TGSATLLAKEYKAGHLDSIRLARLESTLVDLSNSQGGMERIANTPLPYPYVYFPRLFISLFCLIVPVGLVESLGWFTPLA
STVVGFMLLAIERIGTDLQSPFRHSEHQIQMEALCETIEKNLQSMQRDSLGDVRRLEEQA
>Mature_300_residues
MKAAIVKKYRLIIKTLGYVGWSLFWLLLWDIAVTVDFMLFLNAKLNLPLMPLTLLGSALIVLISFRNSSAYNRWWEARTL
WGAMINNSRSFARQVLTLLDDAGGEVNPVKSTLLRRHVAYVNCLAAHLQGQPCPDEVRAFIPAEEFARSGTTNNFANDIL
TGSATLLAKEYKAGHLDSIRLARLESTLVDLSNSQGGMERIANTPLPYPYVYFPRLFISLFCLIVPVGLVESLGWFTPLA
STVVGFMLLAIERIGTDLQSPFRHSEHQIQMEALCETIEKNLQSMQRDSLGDVRRLEEQA

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=260, Percent_Identity=30.3846153846154, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 33707; Mature: 33707

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAIVKKYRLIIKTLGYVGWSLFWLLLWDIAVTVDFMLFLNAKLNLPLMPLTLLGSALI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VLISFRNSSAYNRWWEARTLWGAMINNSRSFARQVLTLLDDAGGEVNPVKSTLLRRHVAY
HHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VNCLAAHLQGQPCPDEVRAFIPAEEFARSGTTNNFANDILTGSATLLAKEYKAGHLDSIR
HHHHHHHHCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHH
LARLESTLVDLSNSQGGMERIANTPLPYPYVYFPRLFISLFCLIVPVGLVESLGWFTPLA
HHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STVVGFMLLAIERIGTDLQSPFRHSEHQIQMEALCETIEKNLQSMQRDSLGDVRRLEEQA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
>Mature Secondary Structure
MKAAIVKKYRLIIKTLGYVGWSLFWLLLWDIAVTVDFMLFLNAKLNLPLMPLTLLGSALI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VLISFRNSSAYNRWWEARTLWGAMINNSRSFARQVLTLLDDAGGEVNPVKSTLLRRHVAY
HHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VNCLAAHLQGQPCPDEVRAFIPAEEFARSGTTNNFANDILTGSATLLAKEYKAGHLDSIR
HHHHHHHHCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHH
LARLESTLVDLSNSQGGMERIANTPLPYPYVYFPRLFISLFCLIVPVGLVESLGWFTPLA
HHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STVVGFMLLAIERIGTDLQSPFRHSEHQIQMEALCETIEKNLQSMQRDSLGDVRRLEEQA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]