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The map label for this gene is bphP [H]

Identifier: 77458987

GI number: 77458987

Start: 3188399

End: 3189520

Strand: Direct

Name: bphP [H]

Synonym: Pfl01_2762

Alternate gene names: 77458987

Gene position: 3188399-3189520 (Clockwise)

Preceding gene: 77458986

Following gene: 77458995

Centisome position: 49.52

GC content: 52.05

Gene sequence:

>1122_bases
ATGGTCAAGCACGTCACTGGAATGCGGTTCGCCGCTGTCGCCAGGGTCACTGAAAAAAACTGGGTGGCGTGCGCAGTAGA
TGACTCCATTGAGTTCGGCTTGAAACCTGGCGACGAGCTGGTGCTTGAGTCAACGATCTGCCATGAAATTCGGCAGCACA
GAAAACCGGTCATTTTTGGCCACGCCAGTGAACATCCCGTTTTTTCCCTGCATCACACGCCCAGTACCTATGGATTGGAA
AGCTATATTTCTATTCCGATCATAAAGGCAAACGGCGAGTTTTTTGGGACACTGTGTGCCATCGACTCTGTGCCTGCTCA
TCTCGATGACCCGGCCATTGCCAACACACTTACGCTTTTCGCCCAATTGATAGCGTTGAGCCTCGATGCCCAGAATAATC
TCGAGATTGCCCAAGCGGAGTTAGTTAATGCCCAGGAGCACGGAAGGTTGCGCGAGCAATTCGTCGCCGTACTCGGGCAT
GATCTGCGCACGCCATTGAGCGCCATTCGTATGAGCGCCGATCTGCTGGAAACCAAAACAACGGACAAAAGATCGCTTAG
CTTAATTTCAGCCATTCGTACTAGCTCCACACGCATGGGAAACCTGATCGAAAACGTGCTGGATTTTGCACGGGGTCGAA
TGGGGAGCGGAATTCCAATCAAACGCCAACTTGTCGATGATCTGGGCAACACACTACGTTTGACTCTGAATGAGGTTCAA
ATCTCGCACCCTCGAGCTACATTTATTGAGTTGGTAGACATACCGGCCGGTGTCTATTGTGACCCTCTGCGTATCAGCCA
GTTGCTTTCCAACTTGTTGGGAAACGCAGTCACCCACGGCTCATTAGCGTCGCCTATCACTGTTAAGGCCGACACTGAAG
TGGACGAAATTGTTATATCTGTGACCAACCAAGGCCCCCCGATACCGCCGCACTTGTCGCCCTTGCTGTTTGAACCTTTC
ACCCGATCGGAGGCTGGACAACGTGGTGAAGGCTTGGGCTTGGGACTCTATATCGCCTCCCAAATTACCACTGCGCACGG
AGGCAACCTGAGCGTGGTGTCCACACTCGAATCGGGAACTTGTTTCGTAGCAAGATTTCCCGCTCGTCTTAAATGTGCCT
AA

Upstream 100 bases:

>100_bases
TGAACGCACTCATTTGAACCGCAGATCTATGACCAGCCAAGAGTTCTCTCAAGACATTAATGCTATCCACCGCATCAAAG
CTGTGCCGGTGATATTGAGC

Downstream 100 bases:

>100_bases
ACAACGATCTTCATCCTTCAGATCATTGTTGAAGACGGTTAGGTCTTGATTCGGTTTCTCGCTCAGGTTCGATGGTGCTC
ACGAAAGCAAGATTTTATTC

Product: GAF sensor Signal transduction histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MVKHVTGMRFAAVARVTEKNWVACAVDDSIEFGLKPGDELVLESTICHEIRQHRKPVIFGHASEHPVFSLHHTPSTYGLE
SYISIPIIKANGEFFGTLCAIDSVPAHLDDPAIANTLTLFAQLIALSLDAQNNLEIAQAELVNAQEHGRLREQFVAVLGH
DLRTPLSAIRMSADLLETKTTDKRSLSLISAIRTSSTRMGNLIENVLDFARGRMGSGIPIKRQLVDDLGNTLRLTLNEVQ
ISHPRATFIELVDIPAGVYCDPLRISQLLSNLLGNAVTHGSLASPITVKADTEVDEIVISVTNQGPPIPPHLSPLLFEPF
TRSEAGQRGEGLGLGLYIASQITTAHGGNLSVVSTLESGTCFVARFPARLKCA

Sequences:

>Translated_373_residues
MVKHVTGMRFAAVARVTEKNWVACAVDDSIEFGLKPGDELVLESTICHEIRQHRKPVIFGHASEHPVFSLHHTPSTYGLE
SYISIPIIKANGEFFGTLCAIDSVPAHLDDPAIANTLTLFAQLIALSLDAQNNLEIAQAELVNAQEHGRLREQFVAVLGH
DLRTPLSAIRMSADLLETKTTDKRSLSLISAIRTSSTRMGNLIENVLDFARGRMGSGIPIKRQLVDDLGNTLRLTLNEVQ
ISHPRATFIELVDIPAGVYCDPLRISQLLSNLLGNAVTHGSLASPITVKADTEVDEIVISVTNQGPPIPPHLSPLLFEPF
TRSEAGQRGEGLGLGLYIASQITTAHGGNLSVVSTLESGTCFVARFPARLKCA
>Mature_373_residues
MVKHVTGMRFAAVARVTEKNWVACAVDDSIEFGLKPGDELVLESTICHEIRQHRKPVIFGHASEHPVFSLHHTPSTYGLE
SYISIPIIKANGEFFGTLCAIDSVPAHLDDPAIANTLTLFAQLIALSLDAQNNLEIAQAELVNAQEHGRLREQFVAVLGH
DLRTPLSAIRMSADLLETKTTDKRSLSLISAIRTSSTRMGNLIENVLDFARGRMGSGIPIKRQLVDDLGNTLRLTLNEVQ
ISHPRATFIELVDIPAGVYCDPLRISQLLSNLLGNAVTHGSLASPITVKADTEVDEIVISVTNQGPPIPPHLSPLLFEPF
TRSEAGQRGEGLGLGLYIASQITTAHGGNLSVVSTLESGTCFVARFPARLKCA

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI87081816, Length=238, Percent_Identity=30.672268907563, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=30.9236947791165, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786912, Length=303, Percent_Identity=26.7326732673267, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789149, Length=249, Percent_Identity=30.5220883534137, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1786783, Length=224, Percent_Identity=29.9107142857143, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=29.004329004329, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789808, Length=220, Percent_Identity=27.7272727272727, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786600, Length=228, Percent_Identity=28.5087719298246, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1788549, Length=219, Percent_Identity=27.8538812785388, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790861, Length=211, Percent_Identity=26.0663507109005, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI48994928, Length=225, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 40370; Mature: 40370

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKHVTGMRFAAVARVTEKNWVACAVDDSIEFGLKPGDELVLESTICHEIRQHRKPVIFG
CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
HASEHPVFSLHHTPSTYGLESYISIPIIKANGEFFGTLCAIDSVPAHLDDPAIANTLTLF
CCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHH
AQLIALSLDAQNNLEIAQAELVNAQEHGRLREQFVAVLGHDLRTPLSAIRMSADLLETKT
HHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
TDKRSLSLISAIRTSSTRMGNLIENVLDFARGRMGSGIPIKRQLVDDLGNTLRLTLNEVQ
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEEEEE
ISHPRATFIELVDIPAGVYCDPLRISQLLSNLLGNAVTHGSLASPITVKADTEVDEIVIS
ECCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEE
VTNQGPPIPPHLSPLLFEPFTRSEAGQRGEGLGLGLYIASQITTAHGGNLSVVSTLESGT
EECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCEEEEEECCCCC
CFVARFPARLKCA
EEEEECCCCCCCC
>Mature Secondary Structure
MVKHVTGMRFAAVARVTEKNWVACAVDDSIEFGLKPGDELVLESTICHEIRQHRKPVIFG
CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
HASEHPVFSLHHTPSTYGLESYISIPIIKANGEFFGTLCAIDSVPAHLDDPAIANTLTLF
CCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHH
AQLIALSLDAQNNLEIAQAELVNAQEHGRLREQFVAVLGHDLRTPLSAIRMSADLLETKT
HHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
TDKRSLSLISAIRTSSTRMGNLIENVLDFARGRMGSGIPIKRQLVDDLGNTLRLTLNEVQ
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEEEEE
ISHPRATFIELVDIPAGVYCDPLRISQLLSNLLGNAVTHGSLASPITVKADTEVDEIVIS
ECCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEE
VTNQGPPIPPHLSPLLFEPFTRSEAGQRGEGLGLGLYIASQITTAHGGNLSVVSTLESGT
EECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCEEEEEECCCCC
CFVARFPARLKCA
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]