Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is ilvA [H]
Identifier: 77458844
GI number: 77458844
Start: 2997942
End: 2998955
Strand: Direct
Name: ilvA [H]
Synonym: Pfl01_2619
Alternate gene names: 77458844
Gene position: 2997942-2998955 (Clockwise)
Preceding gene: 77458843
Following gene: 77458846
Centisome position: 46.56
GC content: 62.72
Gene sequence:
>1014_bases ATGCGCTACAGCCCCGCCCAGCAAGCCCTGCTTGAGCAGTACGTGAAAAAGATCCTCGCCGCTCCGGTGTATGAACTGGC GGTGCGCACGCCGCTGCAACCGGCGCCGGCGCTGTCCGAAGCGCTGGACAACCGGATCCTGCTCAAGCGCGAAGACCTGC AACCGACGTTCTCCTTCAAGATCCGTGGTGCCTACAACAAACTGGTGCAGCTGAGTGATGAGCAGAAGGCGCGCGGAGTA ATCACGGCGTCGGCGGGCAATCATGCGCAAGGCGTAGCGCTGGCGGCGCGGGAACTGGGTATTGCCGCGACCATTGTGAT GCCGGCAACCACGCCTGAGTTGAAAGTGCTGGGCGTCAGTAGTCGCGGAGCCGAGGCGCTATTGCATGGAGAAAGCTTCC CCTTTGCCCTGGCTCACGCGCTGCAACTGGCTGAGCAGACCGGCCGAACGTTCGTCTCGCCATTCGACGATCCCGATGTG ATCGCCGGCCAGGGCACGGTCGCGATGGAAATCCTGCGCGAGCACCAAGGCACACTGGATGCGATCTTCGTCCCGGTGGG CGGTGGCGGGTTGATCGCCGGCATCGCGGCGTATGTGAAATACCTGCGGCCTGAAGTACGGATCATCGGCGTCGAGTCGG AGCACTCGGCCTGCCTGAAGGCTGCCATGCTAGCGGATGAGCGAGTGGTGCTGCCCAACGTGGGCACATTCGCCGATGGC GTGGCGGTGGCGCAGATCGGCGCTTACGGGTTCGAGGTTTGCCGCTTCTGCGTGGATGAGGTCATCACCGTCAGCAACGA CGAACTCTGCGCGGCGATCAAGAATATCTACGACGATACCCGCTCGATCACCGAGCCTTCCGGTGCTTTGGCGGTGGCGG GCATTAAAAAGTACGTGGCGCAAAGCGGCGCACGGAGTCAGACGCTGATCGCCATCGATTCTGGCGCCAATATCAATTTC GACAGCTTGCGACACGTCGCCGAGCGAGCGGCGGCGTGCGGCGTTGTGGCTTGA
Upstream 100 bases:
>100_bases ATTTGGCGGGCTAGCTCACGACTGCAGCACCCAACCCGCCCTAGAGGCGGGTTTTTATTTTCTGTCTCCGGGGTTCTGAA TCAAACGTCAGGAGACGACC
Downstream 100 bases:
>100_bases AGTTACTCGGGAATGGCCACGCCAATCTTGTCCGAGGCCGACCAGATGCGGAAACGCACTTCAACGTCCTGCGGTGCGTA AACCACGATCGGCAGCTTGC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MRYSPAQQALLEQYVKKILAAPVYELAVRTPLQPAPALSEALDNRILLKREDLQPTFSFKIRGAYNKLVQLSDEQKARGV ITASAGNHAQGVALAARELGIAATIVMPATTPELKVLGVSSRGAEALLHGESFPFALAHALQLAEQTGRTFVSPFDDPDV IAGQGTVAMEILREHQGTLDAIFVPVGGGGLIAGIAAYVKYLRPEVRIIGVESEHSACLKAAMLADERVVLPNVGTFADG VAVAQIGAYGFEVCRFCVDEVITVSNDELCAAIKNIYDDTRSITEPSGALAVAGIKKYVAQSGARSQTLIAIDSGANINF DSLRHVAERAAACGVVA
Sequences:
>Translated_337_residues MRYSPAQQALLEQYVKKILAAPVYELAVRTPLQPAPALSEALDNRILLKREDLQPTFSFKIRGAYNKLVQLSDEQKARGV ITASAGNHAQGVALAARELGIAATIVMPATTPELKVLGVSSRGAEALLHGESFPFALAHALQLAEQTGRTFVSPFDDPDV IAGQGTVAMEILREHQGTLDAIFVPVGGGGLIAGIAAYVKYLRPEVRIIGVESEHSACLKAAMLADERVVLPNVGTFADG VAVAQIGAYGFEVCRFCVDEVITVSNDELCAAIKNIYDDTRSITEPSGALAVAGIKKYVAQSGARSQTLIAIDSGANINF DSLRHVAERAAACGVVA >Mature_337_residues MRYSPAQQALLEQYVKKILAAPVYELAVRTPLQPAPALSEALDNRILLKREDLQPTFSFKIRGAYNKLVQLSDEQKARGV ITASAGNHAQGVALAARELGIAATIVMPATTPELKVLGVSSRGAEALLHGESFPFALAHALQLAEQTGRTFVSPFDDPDV IAGQGTVAMEILREHQGTLDAIFVPVGGGGLIAGIAAYVKYLRPEVRIIGVESEHSACLKAAMLADERVVLPNVGTFADG VAVAQIGAYGFEVCRFCVDEVITVSNDELCAAIKNIYDDTRSITEPSGALAVAGIKKYVAQSGARSQTLIAIDSGANINF DSLRHVAERAAACGVVA
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=301, Percent_Identity=34.21926910299, Blast_Score=155, Evalue=4e-38, Organism=Homo sapiens, GI19923959, Length=308, Percent_Identity=30.1948051948052, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI33469958, Length=318, Percent_Identity=29.559748427673, Blast_Score=99, Evalue=8e-21, Organism=Escherichia coli, GI1790207, Length=317, Percent_Identity=54.8895899053628, Blast_Score=320, Evalue=8e-89, Organism=Escherichia coli, GI1789505, Length=312, Percent_Identity=39.1025641025641, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI1789235, Length=229, Percent_Identity=25.3275109170306, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71991565, Length=303, Percent_Identity=36.6336633663366, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17537387, Length=309, Percent_Identity=36.2459546925566, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17508781, Length=267, Percent_Identity=33.3333333333333, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6320930, Length=323, Percent_Identity=52.3219814241486, Blast_Score=305, Evalue=6e-84, Organism=Saccharomyces cerevisiae, GI6322631, Length=272, Percent_Identity=38.6029411764706, Blast_Score=166, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6319788, Length=248, Percent_Identity=27.0161290322581, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI21355833, Length=257, Percent_Identity=38.5214007782101, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24645328, Length=179, Percent_Identity=35.7541899441341, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 35623; Mature: 35623
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYSPAQQALLEQYVKKILAAPVYELAVRTPLQPAPALSEALDNRILLKREDLQPTFSFK CCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEE IRGAYNKLVQLSDEQKARGVITASAGNHAQGVALAARELGIAATIVMPATTPELKVLGVS EECHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEC SRGAEALLHGESFPFALAHALQLAEQTGRTFVSPFDDPDVIAGQGTVAMEILREHQGTLD CCCCCEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCHHHHHHHHHCCCCEE AIFVPVGGGGLIAGIAAYVKYLRPEVRIIGVESEHSACLKAAMLADERVVLPNVGTFADG EEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEECCCCCCHHCC VAVAQIGAYGFEVCRFCVDEVITVSNDELCAAIKNIYDDTRSITEPSGALAVAGIKKYVA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH QSGARSQTLIAIDSGANINFDSLRHVAERAAACGVVA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRYSPAQQALLEQYVKKILAAPVYELAVRTPLQPAPALSEALDNRILLKREDLQPTFSFK CCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEE IRGAYNKLVQLSDEQKARGVITASAGNHAQGVALAARELGIAATIVMPATTPELKVLGVS EECHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEC SRGAEALLHGESFPFALAHALQLAEQTGRTFVSPFDDPDVIAGQGTVAMEILREHQGTLD CCCCCEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCHHHHHHHHHCCCCEE AIFVPVGGGGLIAGIAAYVKYLRPEVRIIGVESEHSACLKAAMLADERVVLPNVGTFADG EEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEECCCCCCHHCC VAVAQIGAYGFEVCRFCVDEVITVSNDELCAAIKNIYDDTRSITEPSGALAVAGIKKYVA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH QSGARSQTLIAIDSGANINFDSLRHVAERAAACGVVA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA