| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77458832
Identifier: 77458832
GI number: 77458832
Start: 2983811
End: 2984848
Strand: Direct
Name: 77458832
Synonym: Pfl01_2607
Alternate gene names: NA
Gene position: 2983811-2984848 (Clockwise)
Preceding gene: 77458831
Following gene: 77458836
Centisome position: 46.34
GC content: 62.52
Gene sequence:
>1038_bases ATGATGCGTCTTTGTGCAGCGTTACTGATTTGCCTGCTCGGCAGCCTGAATTCAGTGCACGCTGCACCCGGGCAGCACCC GCGCTGGAGCGTCGGCTACCACGAGATGACGTTCCTCGACCCGCTCGACCTGCAACCGATGCGTGCCATCGCGTTCTATC CCTCCAGCGACCGCGAACACCTGAGCCTGCTCGAAGGCTATTCGGTCGAGGCCGGCGAAGACACCAAAGTCGCCATCGGC CGTTTCCCGATGCTGATGCTGTCCCACGGCAACACCGGCACGCCACTGGCGCTGCACGACCTGGCCACGTCATTGGCACG CAAGGGCTTTGTGGTGGTGGCGGTGATTCATCCCGGCGACAACTCCAAGGATCACAGTCGCCTCGGCACGTTGAGCAATC TTTATGGCCGGCCGATCCAGATTTCCGAAGCCATTACCGCGACGTTGGGCGACCGCATGCTCGCGCCTTATGTGAACGCC GAACAGGTGGGCGTGATCGGCTATTCGGCGGGTGGTGAAACGGCGTTGATTCTGTCCGGTGCACAGCCGGATCTGGATCG CCTGCGCCGTTACTGCCAGGAGCGCCCGGACGACCGCGACGCCTGCAACACCCAGGGTGAGTTGATTGTCGACCGCGACG ATCTGCAACCGGTGGCCGATCCGCGTGTACATGCGTTGCTGCTAATGGCGCCGCTGAGCCTCAAGTTTGGTCGTCACACC CTGGCCGATGTGCATGTGCCGGTACTGCTCTACAGCGGCGACGGCGACAAACTGGTGGCCTTCGACAAAAACGCCGCCGC TCTGGCGCGCAAACTGCCAACGGCACCGGATTTCAAATTGCTGGCTGGGGCAGGGCACTTTGTGTTCATGGCGCCATGCA ATGAAGAGCAGATTCGTGCGATGCCGGCCCTGTGCACTGATGCCGATGGCGTGGACCGCGAAGACATTCACCGCAACCTG ATATCCGAGGCCGGGCGGTTTTTCTCCCATGCCTTGGGCCGGCCGACCCGCGCGGGGATGCAGACGGCGGATCAGTGA
Upstream 100 bases:
>100_bases ACGTCTGAGTGCAACGCCGCGCCGGATCAGCGAACCTCGGAATCTCGGGCGTCGAACACAACGGATCTTTCGATTGAGTA ACAACAGGGTGGGGCATCCC
Downstream 100 bases:
>100_bases GCGTTTACGCCATCGCCCGGCGCTTGAGCAGCAAGGTCAATCCCAGTCCGGTCACGGACAGCAGCGCCGCACTGAAGAAA ATCCACGAATAACCCAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MMRLCAALLICLLGSLNSVHAAPGQHPRWSVGYHEMTFLDPLDLQPMRAIAFYPSSDREHLSLLEGYSVEAGEDTKVAIG RFPMLMLSHGNTGTPLALHDLATSLARKGFVVVAVIHPGDNSKDHSRLGTLSNLYGRPIQISEAITATLGDRMLAPYVNA EQVGVIGYSAGGETALILSGAQPDLDRLRRYCQERPDDRDACNTQGELIVDRDDLQPVADPRVHALLLMAPLSLKFGRHT LADVHVPVLLYSGDGDKLVAFDKNAAALARKLPTAPDFKLLAGAGHFVFMAPCNEEQIRAMPALCTDADGVDREDIHRNL ISEAGRFFSHALGRPTRAGMQTADQ
Sequences:
>Translated_345_residues MMRLCAALLICLLGSLNSVHAAPGQHPRWSVGYHEMTFLDPLDLQPMRAIAFYPSSDREHLSLLEGYSVEAGEDTKVAIG RFPMLMLSHGNTGTPLALHDLATSLARKGFVVVAVIHPGDNSKDHSRLGTLSNLYGRPIQISEAITATLGDRMLAPYVNA EQVGVIGYSAGGETALILSGAQPDLDRLRRYCQERPDDRDACNTQGELIVDRDDLQPVADPRVHALLLMAPLSLKFGRHT LADVHVPVLLYSGDGDKLVAFDKNAAALARKLPTAPDFKLLAGAGHFVFMAPCNEEQIRAMPALCTDADGVDREDIHRNL ISEAGRFFSHALGRPTRAGMQTADQ >Mature_345_residues MMRLCAALLICLLGSLNSVHAAPGQHPRWSVGYHEMTFLDPLDLQPMRAIAFYPSSDREHLSLLEGYSVEAGEDTKVAIG RFPMLMLSHGNTGTPLALHDLATSLARKGFVVVAVIHPGDNSKDHSRLGTLSNLYGRPIQISEAITATLGDRMLAPYVNA EQVGVIGYSAGGETALILSGAQPDLDRLRRYCQERPDDRDACNTQGELIVDRDDLQPVADPRVHALLLMAPLSLKFGRHT LADVHVPVLLYSGDGDKLVAFDKNAAALARKLPTAPDFKLLAGAGHFVFMAPCNEEQIRAMPALCTDADGVDREDIHRNL ISEAGRFFSHALGRPTRAGMQTADQ
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37433; Mature: 37433
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLCAALLICLLGSLNSVHAAPGQHPRWSVGYHEMTFLDPLDLQPMRAIAFYPSSDREH CHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEECCCCCHHH LSLLEGYSVEAGEDTKVAIGRFPMLMLSHGNTGTPLALHDLATSLARKGFVVVAVIHPGD HHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCC NSKDHSRLGTLSNLYGRPIQISEAITATLGDRMLAPYVNAEQVGVIGYSAGGETALILSG CCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHCCCCCCCCEEEEEECCCCCEEEEEEC AQPDLDRLRRYCQERPDDRDACNTQGELIVDRDDLQPVADPRVHALLLMAPLSLKFGRHT CCCCHHHHHHHHHHCCCCCHHCCCCCCEEEECCCCCCCCCCHHHHEEHHHHHHHHCCCCC LADVHVPVLLYSGDGDKLVAFDKNAAALARKLPTAPDFKLLAGAGHFVFMAPCNEEQIRA CEEEEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCCEEEECCCCEEEEECCCHHHHHH MPALCTDADGVDREDIHRNLISEAGRFFSHALGRPTRAGMQTADQ HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC >Mature Secondary Structure MMRLCAALLICLLGSLNSVHAAPGQHPRWSVGYHEMTFLDPLDLQPMRAIAFYPSSDREH CHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEECCCCCHHH LSLLEGYSVEAGEDTKVAIGRFPMLMLSHGNTGTPLALHDLATSLARKGFVVVAVIHPGD HHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCC NSKDHSRLGTLSNLYGRPIQISEAITATLGDRMLAPYVNAEQVGVIGYSAGGETALILSG CCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHCCCCCCCCEEEEEECCCCCEEEEEEC AQPDLDRLRRYCQERPDDRDACNTQGELIVDRDDLQPVADPRVHALLLMAPLSLKFGRHT CCCCHHHHHHHHHHCCCCCHHCCCCCCEEEECCCCCCCCCCHHHHEEHHHHHHHHCCCCC LADVHVPVLLYSGDGDKLVAFDKNAAALARKLPTAPDFKLLAGAGHFVFMAPCNEEQIRA CEEEEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCCEEEECCCCEEEEECCCHHHHHH MPALCTDADGVDREDIHRNLISEAGRFFSHALGRPTRAGMQTADQ HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA