| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77458786
Identifier: 77458786
GI number: 77458786
Start: 2935103
End: 2935291
Strand: Direct
Name: 77458786
Synonym: Pfl01_2561
Alternate gene names: NA
Gene position: 2935103-2935291 (Clockwise)
Preceding gene: 77458780
Following gene: 77458788
Centisome position: 45.59
GC content: 57.67
Gene sequence:
>189_bases ATGACCCATAAGCAACGCTTGATATATTCGATTCTGATCGCCGTCGCCGTACTGCTGATCATGCTCGGCCTGTCCTGGCT GCAAAACGCCGGCAAGCTCAGCGAGCAAACCTTCCAGTACATCGCCATCGGCGTGGCAGTGGTGGTCGTGGTGATCAACG GCGTGATGCGCCGCAAGGTCAAGCCCTGA
Upstream 100 bases:
>100_bases ATGAGACCCCGTTTACCGCGGCGCATCCCCGTCAAACGGTATGCGCATGGCATCAACGCCGATACAAACCCGATACATTC CAACGGTTCAGGAACCTGTA
Downstream 100 bases:
>100_bases CGGCGTCGGCCGCGCGCCTCAATCGTGGTTGAGCACGGCCGCAGCCTGGGGATGGAGACTGTAGCTCTTGTCGTCGTTGA ACGTGATCACGCCTTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MTHKQRLIYSILIAVAVLLIMLGLSWLQNAGKLSEQTFQYIAIGVAVVVVVINGVMRRKVKP
Sequences:
>Translated_62_residues MTHKQRLIYSILIAVAVLLIMLGLSWLQNAGKLSEQTFQYIAIGVAVVVVVINGVMRRKVKP >Mature_61_residues THKQRLIYSILIAVAVLLIMLGLSWLQNAGKLSEQTFQYIAIGVAVVVVVINGVMRRKVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6893; Mature: 6761
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHKQRLIYSILIAVAVLLIMLGLSWLQNAGKLSEQTFQYIAIGVAVVVVVINGVMRRKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KP CC >Mature Secondary Structure THKQRLIYSILIAVAVLLIMLGLSWLQNAGKLSEQTFQYIAIGVAVVVVVINGVMRRKV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA