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The map label for this gene is glgB

Identifier: 77458761

GI number: 77458761

Start: 2901379

End: 2903610

Strand: Direct

Name: glgB

Synonym: Pfl01_2536

Alternate gene names: 77458761

Gene position: 2901379-2903610 (Clockwise)

Preceding gene: 77458760

Following gene: 77458780

Centisome position: 45.06

GC content: 61.02

Gene sequence:

>2232_bases
ATGAGTTTCTCGAACAGGGAACAGGGTCACGCTAAAGAAAGATTGCTGCCCACTGCAAAAGACATTGATGCTTTAGTGCG
CGCAGAACACCACGACCCGTTTTCCATTCTTGGCCCCCACGGCGATGGTGCCGGCGGGCAATTTATCCGGGCGTATCTGC
CCGGCGCATTGAGTGTTTCTGTCGTCGATAAAAACAGTGGCGAAGAGCTCGGTCCGCTGGAGGCCACCGAAACGCCGGGG
CTGTTTGTCGGGCATTTCGAAGGCTCACGGCCGTACCTGTTGCGCACCCGCTGGGCCGGTGGTGAACAGGTCGCGGAAGA
TCCTTACAGCTTTGGTCAGTTGCTCGGTGAAATGGATTTGTATCTGTTCGCCGAAGGCAACCATCGCGATCTCAGCAGTT
GCCTTGGCGCGCAGCTGAAAACCGTCGATGGCGTCGACGGTGTGCGCTTTGCCGTGTGGGCACCGAATGCCCGGCGGGTG
TCGGTGGTCGGCGATTTCAACGTCTGGGACGGGCGGCGGCATCCGATGCGCTTGCGGCATCCATCCGGGGTCTGGGAGCT
GTTCATTCCACGCTTGCAGGCGGGCGAGCTGTACAAATACGAAATCCTCGGCGCCCACGGCATCCTCCCGCTCAAAGCCG
ACCCGATGGCGCTGGCCACCAGCCTGCCGCCGGACACGGCCTCGAAAGTCGCCTCGCCGTTGCAGATCGACTGGCAGGAT
CAGGACTGGATGAGCGGCCGTCGCGAACGCCAGCAACACAACGCGCCGTTGTCGATCTATGAATTGCACGCCGGATCCTG
GCAATGCGAACTCGACGATCTGGGCGAAGTGGCGCGCCAGTACACCTGGCCGGAGCTCGCCGAGCGGCTGATTCCCTACG
TGAAGGAACTGGGTTTCACCCACATCGAACTGATGCCGATCATGGAGCACCCGTTCGGCGGTTCATGGGGCTATCAGTTG
CTGTCGCAGTTCGCTCCGAGTGCGCGATACGGCACACCCGAGCAGTTCGGCGAGTTCGTCAATGCCTGTCACCAGGCCGG
CATCGGTGTGATTCTCGACTGGGTGCCGGCGCATTTCCCGACCGATACCCATGGCCTTGCGCAATTCGACGGCACCGCGC
TCTACGAATACGGTAATCCACTGGAAGGCTTCCACCAGGATTGGGACACGCTGATCTACAACCTGGGCCGCACCGAAGTG
CACGGCTACATGCTGGCGTCGGCGTTGCACTGGCTCAAGCATTTCCATATCGACGGGCTGCGGGTCGATGCGGTGGCGTC
GATGCTCTATCGTGATTATTCGCGCAAGGCCGGCGAGTGGGTGCCGAACCGTCATGGCGGTCGCGAGAACCTGGAAGCCA
TCGATTTCCTGCGGCACTTGAACGACGTGGTGGCACTGGAAGCACCGGGCGCACTGGTGATTGCCGAGGAGTCCACGGCG
TGGCCGGGCGTCAGCCAGAGCACCCAACAGGGCGGTCTCGGTTTCGCCTACAAATGGAACATGGGCTGGATGCACGACTC
GCTGCACTACATTCAGCAGGATCCGGTGTACCGCGCCCATCACCACAACGAGTTGAGTTTCGGCCTGGTCTACGCCTGGT
CCGAGCGCTTCATCCTGCCGATTTCCCACGACGAAGTGGTGCACGGCAAGCATTCGCTGATCGACAAGATGCCTGGCGAT
CGCTGGCAGAAATTTGCCAACCTGCGGGCTTACCTGAGTTTCATGTGGACCCATCCGGGCAAGAAGCTGTTGTTCATGGG
TTGCGAGTTCGGCCAGTGGCGCGAGTGGAATCATGATCAGCAGCTGGACTGGTATCTGCTGCAATATTCGGAACACAAAG
GCGTGCAGAAACTGGTCAGCGACCTCAATCGGTTGTACCGCGAAGAGCCGGCGCTGCATGAGCAGGACGATGCGCCGCAA
GGGTTTCAGTGGTTGATCGGCGACGATGCGATCAACAGCGTCTATGCGTGGCTGCGCTGGAGCAAGGACGGCACGCCAGT
GCTGGTGGTGGCCAACTTCACCCCGGTGCCGCGTCAGTCTTACCGCGTGGGCGTGCCGTTTGCCGGGCGCTGGAAGGAGT
TGCTCAACAGTGACGCCGACACGTATGCCGGTTCCAATTATGGCAACGGGGGCGGGGCGTTCACCGAAGAGGTGGCCAGC
CATGGCCAGGCGTTGTCGCTGGAGCTGAACCTGCCGCCGCTGGCGGTGTTGATCCTCAAACCCGAAGTCTGA

Upstream 100 bases:

>100_bases
AAGCCGAAAATCGCCCCACCTGGCTGCCCGTGCCGCTGCACGGTCTGTATGGGTTATTGACGGGGCTCAAACCCTTTTCC
GATCTTGGTGGAGAGTAGTC

Downstream 100 bases:

>100_bases
TCCATAACCGAGTCGCTGCTTTCGCCAGCAGGCTGGCTGCCACAGAAAATCAGTCGACGCTGACAATCTAACGTGGGAGC
TAGCCTGCAAGCGATAGCGC

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE

Number of amino acids: Translated: 743; Mature: 742

Protein sequence:

>743_residues
MSFSNREQGHAKERLLPTAKDIDALVRAEHHDPFSILGPHGDGAGGQFIRAYLPGALSVSVVDKNSGEELGPLEATETPG
LFVGHFEGSRPYLLRTRWAGGEQVAEDPYSFGQLLGEMDLYLFAEGNHRDLSSCLGAQLKTVDGVDGVRFAVWAPNARRV
SVVGDFNVWDGRRHPMRLRHPSGVWELFIPRLQAGELYKYEILGAHGILPLKADPMALATSLPPDTASKVASPLQIDWQD
QDWMSGRRERQQHNAPLSIYELHAGSWQCELDDLGEVARQYTWPELAERLIPYVKELGFTHIELMPIMEHPFGGSWGYQL
LSQFAPSARYGTPEQFGEFVNACHQAGIGVILDWVPAHFPTDTHGLAQFDGTALYEYGNPLEGFHQDWDTLIYNLGRTEV
HGYMLASALHWLKHFHIDGLRVDAVASMLYRDYSRKAGEWVPNRHGGRENLEAIDFLRHLNDVVALEAPGALVIAEESTA
WPGVSQSTQQGGLGFAYKWNMGWMHDSLHYIQQDPVYRAHHHNELSFGLVYAWSERFILPISHDEVVHGKHSLIDKMPGD
RWQKFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDQQLDWYLLQYSEHKGVQKLVSDLNRLYREEPALHEQDDAPQ
GFQWLIGDDAINSVYAWLRWSKDGTPVLVVANFTPVPRQSYRVGVPFAGRWKELLNSDADTYAGSNYGNGGGAFTEEVAS
HGQALSLELNLPPLAVLILKPEV

Sequences:

>Translated_743_residues
MSFSNREQGHAKERLLPTAKDIDALVRAEHHDPFSILGPHGDGAGGQFIRAYLPGALSVSVVDKNSGEELGPLEATETPG
LFVGHFEGSRPYLLRTRWAGGEQVAEDPYSFGQLLGEMDLYLFAEGNHRDLSSCLGAQLKTVDGVDGVRFAVWAPNARRV
SVVGDFNVWDGRRHPMRLRHPSGVWELFIPRLQAGELYKYEILGAHGILPLKADPMALATSLPPDTASKVASPLQIDWQD
QDWMSGRRERQQHNAPLSIYELHAGSWQCELDDLGEVARQYTWPELAERLIPYVKELGFTHIELMPIMEHPFGGSWGYQL
LSQFAPSARYGTPEQFGEFVNACHQAGIGVILDWVPAHFPTDTHGLAQFDGTALYEYGNPLEGFHQDWDTLIYNLGRTEV
HGYMLASALHWLKHFHIDGLRVDAVASMLYRDYSRKAGEWVPNRHGGRENLEAIDFLRHLNDVVALEAPGALVIAEESTA
WPGVSQSTQQGGLGFAYKWNMGWMHDSLHYIQQDPVYRAHHHNELSFGLVYAWSERFILPISHDEVVHGKHSLIDKMPGD
RWQKFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDQQLDWYLLQYSEHKGVQKLVSDLNRLYREEPALHEQDDAPQ
GFQWLIGDDAINSVYAWLRWSKDGTPVLVVANFTPVPRQSYRVGVPFAGRWKELLNSDADTYAGSNYGNGGGAFTEEVAS
HGQALSLELNLPPLAVLILKPEV
>Mature_742_residues
SFSNREQGHAKERLLPTAKDIDALVRAEHHDPFSILGPHGDGAGGQFIRAYLPGALSVSVVDKNSGEELGPLEATETPGL
FVGHFEGSRPYLLRTRWAGGEQVAEDPYSFGQLLGEMDLYLFAEGNHRDLSSCLGAQLKTVDGVDGVRFAVWAPNARRVS
VVGDFNVWDGRRHPMRLRHPSGVWELFIPRLQAGELYKYEILGAHGILPLKADPMALATSLPPDTASKVASPLQIDWQDQ
DWMSGRRERQQHNAPLSIYELHAGSWQCELDDLGEVARQYTWPELAERLIPYVKELGFTHIELMPIMEHPFGGSWGYQLL
SQFAPSARYGTPEQFGEFVNACHQAGIGVILDWVPAHFPTDTHGLAQFDGTALYEYGNPLEGFHQDWDTLIYNLGRTEVH
GYMLASALHWLKHFHIDGLRVDAVASMLYRDYSRKAGEWVPNRHGGRENLEAIDFLRHLNDVVALEAPGALVIAEESTAW
PGVSQSTQQGGLGFAYKWNMGWMHDSLHYIQQDPVYRAHHHNELSFGLVYAWSERFILPISHDEVVHGKHSLIDKMPGDR
WQKFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDQQLDWYLLQYSEHKGVQKLVSDLNRLYREEPALHEQDDAPQG
FQWLIGDDAINSVYAWLRWSKDGTPVLVVANFTPVPRQSYRVGVPFAGRWKELLNSDADTYAGSNYGNGGGAFTEEVASH
GQALSLELNLPPLAVLILKPEV

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family

Homologues:

Organism=Homo sapiens, GI189458812, Length=661, Percent_Identity=28.1391830559758, Blast_Score=183, Evalue=4e-46,
Organism=Escherichia coli, GI1789839, Length=727, Percent_Identity=53.7826685006878, Blast_Score=794, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=656, Percent_Identity=25, Blast_Score=171, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI32564391, Length=581, Percent_Identity=25.1290877796902, Blast_Score=151, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6320826, Length=658, Percent_Identity=26.7477203647416, Blast_Score=168, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28573410, Length=599, Percent_Identity=28.0467445742905, Blast_Score=182, Evalue=8e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGB_PSEPF (Q3KD78)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_348267.1
- ProteinModelPortal:   Q3KD78
- SMR:   Q3KD78
- STRING:   Q3KD78
- GeneID:   3712109
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_2536
- eggNOG:   COG0296
- HOGENOM:   HBG287139
- OMA:   DGTCLYE
- ProtClustDB:   PRK05402
- BioCyc:   PFLU205922:PFL_2536-MONOMER
- HAMAP:   MF_00685
- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1180
- Gene3D:   G3DSA:3.20.20.80
- Gene3D:   G3DSA:2.60.40.10
- TIGRFAMs:   TIGR01515

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48; SSF51445 Glyco_hydro_cat; SSF81296 Ig_E-set

EC number: =2.4.1.18

Molecular weight: Translated: 83793; Mature: 83662

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: ACT_SITE 318-318 ACT_SITE 353-353 ACT_SITE 358-358 ACT_SITE 421-421 ACT_SITE 423-423 ACT_SITE 476-476 ACT_SITE 543-543 ACT_SITE 544-544

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSNREQGHAKERLLPTAKDIDALVRAEHHDPFSILGPHGDGAGGQFIRAYLPGALSVS
CCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEE
VVDKNSGEELGPLEATETPGLFVGHFEGSRPYLLRTRWAGGEQVAEDPYSFGQLLGEMDL
EEECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHCCHHHHHHHHCCCCE
YLFAEGNHRDLSSCLGAQLKTVDGVDGVRFAVWAPNARRVSVVGDFNVWDGRRHPMRLRH
EEEECCCCHHHHHHHCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEECC
PSGVWELFIPRLQAGELYKYEILGAHGILPLKADPMALATSLPPDTASKVASPLQIDWQD
CCCCHHHHHCCCCCCCEEEEEEECCCCEEECCCCCHHHCCCCCCCCHHHHCCCCEECCCC
QDWMSGRRERQQHNAPLSIYELHAGSWQCELDDLGEVARQYTWPELAERLIPYVKELGFT
CHHHHHHHHHHHCCCCEEEEEEECCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
HIELMPIMEHPFGGSWGYQLLSQFAPSARYGTPEQFGEFVNACHQAGIGVILDWVPAHFP
EEEEEEHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
TDTHGLAQFDGTALYEYGNPLEGFHQDWDTLIYNLGRTEVHGYMLASALHWLKHFHIDGL
CCCCCCHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
RVDAVASMLYRDYSRKAGEWVPNRHGGRENLEAIDFLRHLNDVVALEAPGALVIAEESTA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEECCCC
WPGVSQSTQQGGLGFAYKWNMGWMHDSLHYIQQDPVYRAHHHNELSFGLVYAWSERFILP
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCEEEEEEEECCCEEEE
ISHDEVVHGKHSLIDKMPGDRWQKFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDQ
ECCCCHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
QLDWYLLQYSEHKGVQKLVSDLNRLYREEPALHEQDDAPQGFQWLIGDDAINSVYAWLRW
CCEEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHEEE
SKDGTPVLVVANFTPVPRQSYRVGVPFAGRWKELLNSDADTYAGSNYGNGGGAFTEEVAS
CCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHC
HGQALSLELNLPPLAVLILKPEV
CCCEEEEEECCCCEEEEEECCCC
>Mature Secondary Structure 
SFSNREQGHAKERLLPTAKDIDALVRAEHHDPFSILGPHGDGAGGQFIRAYLPGALSVS
CCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEE
VVDKNSGEELGPLEATETPGLFVGHFEGSRPYLLRTRWAGGEQVAEDPYSFGQLLGEMDL
EEECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHCCHHHHHHHHCCCCE
YLFAEGNHRDLSSCLGAQLKTVDGVDGVRFAVWAPNARRVSVVGDFNVWDGRRHPMRLRH
EEEECCCCHHHHHHHCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEECC
PSGVWELFIPRLQAGELYKYEILGAHGILPLKADPMALATSLPPDTASKVASPLQIDWQD
CCCCHHHHHCCCCCCCEEEEEEECCCCEEECCCCCHHHCCCCCCCCHHHHCCCCEECCCC
QDWMSGRRERQQHNAPLSIYELHAGSWQCELDDLGEVARQYTWPELAERLIPYVKELGFT
CHHHHHHHHHHHCCCCEEEEEEECCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
HIELMPIMEHPFGGSWGYQLLSQFAPSARYGTPEQFGEFVNACHQAGIGVILDWVPAHFP
EEEEEEHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
TDTHGLAQFDGTALYEYGNPLEGFHQDWDTLIYNLGRTEVHGYMLASALHWLKHFHIDGL
CCCCCCHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
RVDAVASMLYRDYSRKAGEWVPNRHGGRENLEAIDFLRHLNDVVALEAPGALVIAEESTA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEECCCC
WPGVSQSTQQGGLGFAYKWNMGWMHDSLHYIQQDPVYRAHHHNELSFGLVYAWSERFILP
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCEEEEEEEECCCEEEE
ISHDEVVHGKHSLIDKMPGDRWQKFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDQ
ECCCCHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
QLDWYLLQYSEHKGVQKLVSDLNRLYREEPALHEQDDAPQGFQWLIGDDAINSVYAWLRW
CCEEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHEEE
SKDGTPVLVVANFTPVPRQSYRVGVPFAGRWKELLNSDADTYAGSNYGNGGGAFTEEVAS
CCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHC
HGQALSLELNLPPLAVLILKPEV
CCCEEEEEECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA