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The map label for this gene is ydcL [H]

Identifier: 77458741

GI number: 77458741

Start: 2873165

End: 2873836

Strand: Direct

Name: ydcL [H]

Synonym: Pfl01_2516

Alternate gene names: 77458741

Gene position: 2873165-2873836 (Clockwise)

Preceding gene: 77458740

Following gene: 77458745

Centisome position: 44.63

GC content: 60.42

Gene sequence:

>672_bases
ATGAAGCTAGCCGTAATGATGAGCACCCTGTGCATTGCCACGCTGGGCGTGGTGGGTTGCTCCAGCAAAACCGTCGCACC
CGACGAGTACTCAGGCTTCCTCAAGGACTACAGCCAACTCAGGGAGGCCAAATCCCCGTCGGGGGCCGAAGTGATGCGCT
GGATCGACCCGAAAGTCGACATCGGCAAATTCACCAGCTTTTACGTCGAACCGACCCAGCTCTATCCCAAACCGCAACCC
ACCGTGAAGATTCCACAGCAGACCCTCAACGGCATCACCAGCTACTACGATCAGGCGCTCAAGCGTGAACTGGGCAAATC
CCTGCCGCTGGCCTCAGGCCCCGGGCCGGGCGTGATTGTGGTGCGCGCGGCCATCACTGCCGTCAGCAGCAAGACCGAAG
GCCTGCATGCTTATGAGGTGATTCCGGTGGCGTTGGTGGCGGCAGCGGTCAGCACCGCCAGCGGTATTCGCGATCAGGAA
ACCACGCTGGCGACCGAAGCGGTGTTCCTCGATGGCGGCACCAACAAGGTGGCGGCGCAGGTGGTGCGCAAGGGCACTGG
CAAACCGCTGGAAAATGATTCGCAGGTGATGAAGGCCGATGACGTGAAAAGCGTGATCGATGGCTGGGCCTCGGATCTGC
ATCAGTCCTACCTCAAGCTCAAGGCCAAGTAA

Upstream 100 bases:

>100_bases
TTGTGCAATGTTCGGGTTTCTGATCGCAAACGGCGCGAATTTAGCTATACCTGTAACTCCCCCGACGCAATAAATTCGGC
CTTCCGACAGGAGTTACAGC

Downstream 100 bases:

>100_bases
GGCTGGCTGCCGGATCGCTCATGGCGGGCGATCCGGCTGGCTGTCATCAGAACTCGGCTCTGGCTCGGCGGTTGTAGTAG
CTGAGCAGTCCATCGTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKLAVMMSTLCIATLGVVGCSSKTVAPDEYSGFLKDYSQLREAKSPSGAEVMRWIDPKVDIGKFTSFYVEPTQLYPKPQP
TVKIPQQTLNGITSYYDQALKRELGKSLPLASGPGPGVIVVRAAITAVSSKTEGLHAYEVIPVALVAAAVSTASGIRDQE
TTLATEAVFLDGGTNKVAAQVVRKGTGKPLENDSQVMKADDVKSVIDGWASDLHQSYLKLKAK

Sequences:

>Translated_223_residues
MKLAVMMSTLCIATLGVVGCSSKTVAPDEYSGFLKDYSQLREAKSPSGAEVMRWIDPKVDIGKFTSFYVEPTQLYPKPQP
TVKIPQQTLNGITSYYDQALKRELGKSLPLASGPGPGVIVVRAAITAVSSKTEGLHAYEVIPVALVAAAVSTASGIRDQE
TTLATEAVFLDGGTNKVAAQVVRKGTGKPLENDSQVMKADDVKSVIDGWASDLHQSYLKLKAK
>Mature_223_residues
MKLAVMMSTLCIATLGVVGCSSKTVAPDEYSGFLKDYSQLREAKSPSGAEVMRWIDPKVDIGKFTSFYVEPTQLYPKPQP
TVKIPQQTLNGITSYYDQALKRELGKSLPLASGPGPGVIVVRAAITAVSSKTEGLHAYEVIPVALVAAAVSTASGIRDQE
TTLATEAVFLDGGTNKVAAQVVRKGTGKPLENDSQVMKADDVKSVIDGWASDLHQSYLKLKAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787701, Length=206, Percent_Identity=41.2621359223301, Blast_Score=172, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021747 [H]

Pfam domain/function: PF11769 DUF3313 [H]

EC number: NA

Molecular weight: Translated: 23791; Mature: 23791

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAVMMSTLCIATLGVVGCSSKTVAPDEYSGFLKDYSQLREAKSPSGAEVMRWIDPKVD
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
IGKFTSFYVEPTQLYPKPQPTVKIPQQTLNGITSYYDQALKRELGKSLPLASGPGPGVIV
CCCHHHEEECHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VRAAITAVSSKTEGLHAYEVIPVALVAAAVSTASGIRDQETTLATEAVFLDGGTNKVAAQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCHHHHHH
VVRKGTGKPLENDSQVMKADDVKSVIDGWASDLHQSYLKLKAK
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLAVMMSTLCIATLGVVGCSSKTVAPDEYSGFLKDYSQLREAKSPSGAEVMRWIDPKVD
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
IGKFTSFYVEPTQLYPKPQPTVKIPQQTLNGITSYYDQALKRELGKSLPLASGPGPGVIV
CCCHHHEEECHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VRAAITAVSSKTEGLHAYEVIPVALVAAAVSTASGIRDQETTLATEAVFLDGGTNKVAAQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCHHHHHH
VVRKGTGKPLENDSQVMKADDVKSVIDGWASDLHQSYLKLKAK
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]