| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458730
Identifier: 77458730
GI number: 77458730
Start: 2863609
End: 2864586
Strand: Direct
Name: 77458730
Synonym: Pfl01_2505
Alternate gene names: NA
Gene position: 2863609-2864586 (Clockwise)
Preceding gene: 77458729
Following gene: 77458731
Centisome position: 44.48
GC content: 62.27
Gene sequence:
>978_bases ATGTCATTCACCGAACCCGCAGCACGACCGAGCAGCGCCGATTTCCGCTGGCCCCGGGACAAGGAAGAATCCTGGCTGGC GCAAGCGGCGACCCTCGACGGCGACGTCGCGCAATATTTTCTGGTCAGCGCCCGTTGCGGCTGCTTCATGCAAGCCGCCC GCAGCCTCAACGTGCGCTCGACCCTGCTGCGCAAACAACTGGCGCAACTCGAACAGCAACTGCAATGTGCGCTGTTCAGC TTTCAGGGCAGCGCCTTGAGCCTGACCCGTGAAGGCCAGCAATTGCAGGCGCAACTGATCGCCCTGGCTCACGAGCGCAA ACTCCCGGTGATCGAGCAACCCCTGATAAGGCTGGCCGTCGCCGAATCGATCCTGCATGACATCCTCGGACGCGACCTCA TCGCACTGTTGCGCCGCAACGCCAGCGTGCGCCTCGAGATCATCGCCCTCGACAGCGAACTGGCCCTGCGCGCCGTCAGC GCCGACATCGTGCTGTGGCTCGCCCACGGCGATACCCCGCACCCCGGCCCGACCTTCGCCACCAGCGAACCGCAACGCCT CGCGCAACTGGAATACCAGCCACACATTGCCAAGCGTTACTCCCGCGTGACTGCACGCCCGGAAAGCCCCGACGACCTCG CCGATTTCATGCTGGTGCAATGGCAGCATGACCGGCAGATCGACAGCTTTCGACCGTGGAATGAACTGGTCGCACAGCGG TTGGCCGGGGTAGTGCAGATGCAGTCTTATGAACTGATGCTGGAGATGATCCGGTGCAGCGCGTGTATTGGTTTGCTGCC GATGTACATGAGCCGGTTTGATCGCGGGTTGGTGGCGTTGCCGGGGTTGTTTGACGAGGCGATGCGGTTGCAGGCCTGGT TGGCGGTGAACAGTGAATCGCAGGAGGCTGGCGAGGTGCGGACGTTGGTTGAGTTGATTCAACGCACTTTCAATGAGCGG CAGGAGTGGTTCGAGTAA
Upstream 100 bases:
>100_bases CACCGCAACGCTGAGTATCGACGGGGCCGAGCTCAATAAGGTGCTGGAGACCAAACCCTAAGCGCGGCACACCAAAACAA AGATCGACAGGGAGTCATCG
Downstream 100 bases:
>100_bases GTCTCGCCAGGATCAGTTGCGCCGGTTTACAGTGACCGGCCACGCACTGGTCCAGGAGGGATCTTTCATGCCTGAGCACA ACCCCGCCATTCACCTCGAA
Product: LysR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; LysR Family Regulatory Protein
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSFTEPAARPSSADFRWPRDKEESWLAQAATLDGDVAQYFLVSARCGCFMQAARSLNVRSTLLRKQLAQLEQQLQCALFS FQGSALSLTREGQQLQAQLIALAHERKLPVIEQPLIRLAVAESILHDILGRDLIALLRRNASVRLEIIALDSELALRAVS ADIVLWLAHGDTPHPGPTFATSEPQRLAQLEYQPHIAKRYSRVTARPESPDDLADFMLVQWQHDRQIDSFRPWNELVAQR LAGVVQMQSYELMLEMIRCSACIGLLPMYMSRFDRGLVALPGLFDEAMRLQAWLAVNSESQEAGEVRTLVELIQRTFNER QEWFE
Sequences:
>Translated_325_residues MSFTEPAARPSSADFRWPRDKEESWLAQAATLDGDVAQYFLVSARCGCFMQAARSLNVRSTLLRKQLAQLEQQLQCALFS FQGSALSLTREGQQLQAQLIALAHERKLPVIEQPLIRLAVAESILHDILGRDLIALLRRNASVRLEIIALDSELALRAVS ADIVLWLAHGDTPHPGPTFATSEPQRLAQLEYQPHIAKRYSRVTARPESPDDLADFMLVQWQHDRQIDSFRPWNELVAQR LAGVVQMQSYELMLEMIRCSACIGLLPMYMSRFDRGLVALPGLFDEAMRLQAWLAVNSESQEAGEVRTLVELIQRTFNER QEWFE >Mature_324_residues SFTEPAARPSSADFRWPRDKEESWLAQAATLDGDVAQYFLVSARCGCFMQAARSLNVRSTLLRKQLAQLEQQLQCALFSF QGSALSLTREGQQLQAQLIALAHERKLPVIEQPLIRLAVAESILHDILGRDLIALLRRNASVRLEIIALDSELALRAVSA DIVLWLAHGDTPHPGPTFATSEPQRLAQLEYQPHIAKRYSRVTARPESPDDLADFMLVQWQHDRQIDSFRPWNELVAQRL AGVVQMQSYELMLEMIRCSACIGLLPMYMSRFDRGLVALPGLFDEAMRLQAWLAVNSESQEAGEVRTLVELIQRTFNERQ EWFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36914; Mature: 36783
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTEPAARPSSADFRWPRDKEESWLAQAATLDGDVAQYFLVSARCGCFMQAARSLNVRS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH TLLRKQLAQLEQQLQCALFSFQGSALSLTREGQQLQAQLIALAHERKLPVIEQPLIRLAV HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AESILHDILGRDLIALLRRNASVRLEIIALDSELALRAVSADIVLWLAHGDTPHPGPTFA HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHEEEEEEECCCCCCCCCCCC TSEPQRLAQLEYQPHIAKRYSRVTARPESPDDLADFMLVQWQHDRQIDSFRPWNELVAQR CCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH LAGVVQMQSYELMLEMIRCSACIGLLPMYMSRFDRGLVALPGLFDEAMRLQAWLAVNSES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCC QEAGEVRTLVELIQRTFNERQEWFE HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFTEPAARPSSADFRWPRDKEESWLAQAATLDGDVAQYFLVSARCGCFMQAARSLNVRS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH TLLRKQLAQLEQQLQCALFSFQGSALSLTREGQQLQAQLIALAHERKLPVIEQPLIRLAV HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AESILHDILGRDLIALLRRNASVRLEIIALDSELALRAVSADIVLWLAHGDTPHPGPTFA HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHEEEEEEECCCCCCCCCCCC TSEPQRLAQLEYQPHIAKRYSRVTARPESPDDLADFMLVQWQHDRQIDSFRPWNELVAQR CCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH LAGVVQMQSYELMLEMIRCSACIGLLPMYMSRFDRGLVALPGLFDEAMRLQAWLAVNSES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCC QEAGEVRTLVELIQRTFNERQEWFE HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA