| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458728
Identifier: 77458728
GI number: 77458728
Start: 2862140
End: 2862625
Strand: Direct
Name: 77458728
Synonym: Pfl01_2503
Alternate gene names: NA
Gene position: 2862140-2862625 (Clockwise)
Preceding gene: 77458727
Following gene: 77458729
Centisome position: 44.45
GC content: 60.91
Gene sequence:
>486_bases ATGGACAAGGAAGAAGTAATGACTCAATTGATCTCCCACGTATCCCCGCAATCCCTGACCGACGTTCTGCAAGCCGCCGG TTACCGCGTCAACCAGACCGAACAGAACGGCATTGTCCAGTTGCTCAGCGCCAGCCAGGGCATCGGTTATGCCGTGCGTT TCGGCAACCCGGCGGTGGCGGAGCAGGGCAGCTACGTCGACTTCACCTTCAGCTGCGCCTTGCGCGTGCAGGGTGAGTTG CCGGCGGGTGTGGCCGAGCAGTGGAACGCAACCCGCCGGTTTGCCCGGTTGTCGTTGCAGGGCGAGTTTCTGGTGATGGA GATGGATGTGGTGGTGGCCGCTGGCGTCAGCAGCGATTACCTGCGCGGCAACCTGGAGTTGTGGGATCGCCTGCTTCAGG AGTTCATCGTGTATCTGCGTGATTTCACCCAGAACGCGGCTGCCACCCAGGCTCCAAAGGTTGAGCAAGAGGAAGTCGCG CTGTGA
Upstream 100 bases:
>100_bases GGGTCAAGTTTGATGAACTGGCTCAGGGCTTTGGCGACGAACTGTACAAGACTCAATTCGATGCGCCGCAAGCTGCGATC GCGCACTGATTAAAAGACTC
Downstream 100 bases:
>100_bases CAAAACCTGCCATGGTAATCAGCGCCGCTGCGGTGGCGCTGTTGGTGGTGGCCGTGGCGCTGGTGGTGCGGCCGGGCAAT GACCCGGTCGCCGCCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MDKEEVMTQLISHVSPQSLTDVLQAAGYRVNQTEQNGIVQLLSASQGIGYAVRFGNPAVAEQGSYVDFTFSCALRVQGEL PAGVAEQWNATRRFARLSLQGEFLVMEMDVVVAAGVSSDYLRGNLELWDRLLQEFIVYLRDFTQNAAATQAPKVEQEEVA L
Sequences:
>Translated_161_residues MDKEEVMTQLISHVSPQSLTDVLQAAGYRVNQTEQNGIVQLLSASQGIGYAVRFGNPAVAEQGSYVDFTFSCALRVQGEL PAGVAEQWNATRRFARLSLQGEFLVMEMDVVVAAGVSSDYLRGNLELWDRLLQEFIVYLRDFTQNAAATQAPKVEQEEVA L >Mature_161_residues MDKEEVMTQLISHVSPQSLTDVLQAAGYRVNQTEQNGIVQLLSASQGIGYAVRFGNPAVAEQGSYVDFTFSCALRVQGEL PAGVAEQWNATRRFARLSLQGEFLVMEMDVVVAAGVSSDYLRGNLELWDRLLQEFIVYLRDFTQNAAATQAPKVEQEEVA L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17789; Mature: 17789
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKEEVMTQLISHVSPQSLTDVLQAAGYRVNQTEQNGIVQLLSASQGIGYAVRFGNPAVA CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCC EQGSYVDFTFSCALRVQGELPAGVAEQWNATRRFARLSLQGEFLVMEMDVVVAAGVSSDY CCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHH LRGNLELWDRLLQEFIVYLRDFTQNAAATQAPKVEQEEVAL HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MDKEEVMTQLISHVSPQSLTDVLQAAGYRVNQTEQNGIVQLLSASQGIGYAVRFGNPAVA CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCC EQGSYVDFTFSCALRVQGELPAGVAEQWNATRRFARLSLQGEFLVMEMDVVVAAGVSSDY CCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHH LRGNLELWDRLLQEFIVYLRDFTQNAAATQAPKVEQEEVAL HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA