Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77458720

Identifier: 77458720

GI number: 77458720

Start: 2853054

End: 2854337

Strand: Direct

Name: 77458720

Synonym: Pfl01_2495

Alternate gene names: NA

Gene position: 2853054-2854337 (Clockwise)

Preceding gene: 77458719

Following gene: 77458721

Centisome position: 44.31

GC content: 60.36

Gene sequence:

>1284_bases
ATGGCGGTCAATCGACGTAATTTCGTGCTCGGAACTTTGGGTGTTGGCGCTTTGCTGGTGGGCGTGGGTGCGTTGTTAAG
GCCGGGGGATCGCGGCGGGCCTTACAGTGACTATTTTCGGGCGCTGAACAACGAACTCAAGACCAAAGGCCCGATGCGCC
CGGTGTTGCTGATCGATCTGGATCGGCTGGATCACAACATCGACGTGGTGATGCGCTCGGTCAAACGCGCGGGCAAGCAG
TTGCGGCTGGTAGAGAAGTCATTGCCATCGCCGGGCTTGCTCCGCTACATCGGCCAACGGGCGGGGACGCAGCGGCTGAT
GTCGTTCCATCAGCCGTTTCTCAATCACGATGCGGTGACGTTTCCGCAGTCCGACATTCTGCTCGGCAAACCGCTGCCGG
TGCGCTCGGCCGAGATTTTCTACCAGACTCACAAAGGCCCCTTCGACCCGACGAAACAACTGCAATGGCTGATCGACAAC
CCCGAACGCTTGCAGCAATACCTCGCACTGGCCCAGGGATTTGGCACGCGGATGCGGATCAACATCGAGCTGGACGTCGG
CCTGCATCGAGGCGGCGTCAGTGACGTGAACGTGCTCGGGCAGATGCTCGCGCTGATCGCCGCCAACCCGCAGCATCTGG
CGTTCGCCGGCTTCATGGGCTACGACCCGTTCGTGGGCATGGGCGTGCCGGGGATTCTCGGTTCGCCCGAGGAACTGTTC
GCCAAGGTGATGGTGATTTATCAGCGCTGCGTCGACTTCACCCGGCAGCAATATCCGGCGCTGTGGCATGACGGCTTGTG
CCTGAATACGGCCGGCAGCCCGAGTTATCGCATGCATGAAAACGAACACCTGAGCAGTGAGGTGTCGGTGGGGACGGCGA
TGCTCAAGCCGACTCATTACGATCTGCCGTCGCTGGTCGAACATGAACCTGCCGCGTACATCGCCACGCCGGTGTTGAAA
AGCACGGGTGCGGTGAACATCCCGGCGCTGGATGACAAGTCGAAACTGTTTTCGTGGTGGGACACCAACCAGCGCCAGAC
CTTCTTCATCTACGGTGGCAACTGGATGGCCGAATTCGAATCGCCGCCCGGATTGCAGAGCAATGGTGTTTACGGCCGTA
GCTCGAATCAGGAGATGGTCAATGGCTCGAATGCCGTGGGGCTGACGGTGGAGGATCAGGTGTTCTTGCGCCCGACCCAG
ACCGAAGCCGTCCTTCTGCAATTCGGCGACTTGCTGGCGGTGCGTGGCGGCAAGATCGTCGATACCTGGCCGGTGTATAC
CTGA

Upstream 100 bases:

>100_bases
TCTATCCGCGCTGGCAGGAATTCATTCAGGTACGCCAGGCGGTGGACCCGAGCGGCAAGTTTCTCAACGGGCATCTGTCG
TCGATTCTGGGGGTGAGCTG

Downstream 100 bases:

>100_bases
TCTGCTGACTTCTTCAACACAACGCAAAACCTTCAGCAATTTCCGTAATGAAGCTTTTATGACAAAAGTTCGGTAGCACA
TCGCCAGTCCGGTCATGCCT

Product: alanine racemase-like

Products: NA

Alternate protein names: Alanine Racemase-Like; Alanine Racemase Domain Protein; Alanine Racemase N-Terminal Domain Family

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MAVNRRNFVLGTLGVGALLVGVGALLRPGDRGGPYSDYFRALNNELKTKGPMRPVLLIDLDRLDHNIDVVMRSVKRAGKQ
LRLVEKSLPSPGLLRYIGQRAGTQRLMSFHQPFLNHDAVTFPQSDILLGKPLPVRSAEIFYQTHKGPFDPTKQLQWLIDN
PERLQQYLALAQGFGTRMRINIELDVGLHRGGVSDVNVLGQMLALIAANPQHLAFAGFMGYDPFVGMGVPGILGSPEELF
AKVMVIYQRCVDFTRQQYPALWHDGLCLNTAGSPSYRMHENEHLSSEVSVGTAMLKPTHYDLPSLVEHEPAAYIATPVLK
STGAVNIPALDDKSKLFSWWDTNQRQTFFIYGGNWMAEFESPPGLQSNGVYGRSSNQEMVNGSNAVGLTVEDQVFLRPTQ
TEAVLLQFGDLLAVRGGKIVDTWPVYT

Sequences:

>Translated_427_residues
MAVNRRNFVLGTLGVGALLVGVGALLRPGDRGGPYSDYFRALNNELKTKGPMRPVLLIDLDRLDHNIDVVMRSVKRAGKQ
LRLVEKSLPSPGLLRYIGQRAGTQRLMSFHQPFLNHDAVTFPQSDILLGKPLPVRSAEIFYQTHKGPFDPTKQLQWLIDN
PERLQQYLALAQGFGTRMRINIELDVGLHRGGVSDVNVLGQMLALIAANPQHLAFAGFMGYDPFVGMGVPGILGSPEELF
AKVMVIYQRCVDFTRQQYPALWHDGLCLNTAGSPSYRMHENEHLSSEVSVGTAMLKPTHYDLPSLVEHEPAAYIATPVLK
STGAVNIPALDDKSKLFSWWDTNQRQTFFIYGGNWMAEFESPPGLQSNGVYGRSSNQEMVNGSNAVGLTVEDQVFLRPTQ
TEAVLLQFGDLLAVRGGKIVDTWPVYT
>Mature_426_residues
AVNRRNFVLGTLGVGALLVGVGALLRPGDRGGPYSDYFRALNNELKTKGPMRPVLLIDLDRLDHNIDVVMRSVKRAGKQL
RLVEKSLPSPGLLRYIGQRAGTQRLMSFHQPFLNHDAVTFPQSDILLGKPLPVRSAEIFYQTHKGPFDPTKQLQWLIDNP
ERLQQYLALAQGFGTRMRINIELDVGLHRGGVSDVNVLGQMLALIAANPQHLAFAGFMGYDPFVGMGVPGILGSPEELFA
KVMVIYQRCVDFTRQQYPALWHDGLCLNTAGSPSYRMHENEHLSSEVSVGTAMLKPTHYDLPSLVEHEPAAYIATPVLKS
TGAVNIPALDDKSKLFSWWDTNQRQTFFIYGGNWMAEFESPPGLQSNGVYGRSSNQEMVNGSNAVGLTVEDQVFLRPTQT
EAVLLQFGDLLAVRGGKIVDTWPVYT

Specific function: Unknown

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47303; Mature: 47172

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNRRNFVLGTLGVGALLVGVGALLRPGDRGGPYSDYFRALNNELKTKGPMRPVLLIDL
CCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEH
DRLDHNIDVVMRSVKRAGKQLRLVEKSLPSPGLLRYIGQRAGTQRLMSFHQPFLNHDAVT
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FPQSDILLGKPLPVRSAEIFYQTHKGPFDPTKQLQWLIDNPERLQQYLALAQGFGTRMRI
CCCCCEEECCCCCCCCCEEEEEECCCCCCHHHHHHEEECCHHHHHHHHHHHHCCCCEEEE
NIELDVGLHRGGVSDVNVLGQMLALIAANPQHLAFAGFMGYDPFVGMGVPGILGSPEELF
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH
AKVMVIYQRCVDFTRQQYPALWHDGLCLNTAGSPSYRMHENEHLSSEVSVGTAMLKPTHY
HHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCCCCCCCCCCCCCCHHHHHCCEEECCCCC
DLPSLVEHEPAAYIATPVLKSTGAVNIPALDDKSKLFSWWDTNQRQTFFIYGGNWMAEFE
CCHHHHCCCCCHHHHHHHHHCCCCEECCCCCCHHHHEEEECCCCCEEEEEECCCEEEECC
SPPGLQSNGVYGRSSNQEMVNGSNAVGLTVEDQVFLRPTQTEAVLLQFGDLLAVRGGKIV
CCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCEEECCCCHHHHHHHHCCEEEECCCEEE
DTWPVYT
ECCCCCC
>Mature Secondary Structure 
AVNRRNFVLGTLGVGALLVGVGALLRPGDRGGPYSDYFRALNNELKTKGPMRPVLLIDL
CCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEH
DRLDHNIDVVMRSVKRAGKQLRLVEKSLPSPGLLRYIGQRAGTQRLMSFHQPFLNHDAVT
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FPQSDILLGKPLPVRSAEIFYQTHKGPFDPTKQLQWLIDNPERLQQYLALAQGFGTRMRI
CCCCCEEECCCCCCCCCEEEEEECCCCCCHHHHHHEEECCHHHHHHHHHHHHCCCCEEEE
NIELDVGLHRGGVSDVNVLGQMLALIAANPQHLAFAGFMGYDPFVGMGVPGILGSPEELF
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH
AKVMVIYQRCVDFTRQQYPALWHDGLCLNTAGSPSYRMHENEHLSSEVSVGTAMLKPTHY
HHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCCCCCCCCCCCCCCHHHHHCCEEECCCCC
DLPSLVEHEPAAYIATPVLKSTGAVNIPALDDKSKLFSWWDTNQRQTFFIYGGNWMAEFE
CCHHHHCCCCCHHHHHHHHHCCCCEECCCCCCHHHHEEEECCCCCEEEEEECCCEEEECC
SPPGLQSNGVYGRSSNQEMVNGSNAVGLTVEDQVFLRPTQTEAVLLQFGDLLAVRGGKIV
CCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCEEECCCCHHHHHHHHCCEEEECCCEEE
DTWPVYT
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA