Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77458718

Identifier: 77458718

GI number: 77458718

Start: 2851287

End: 2851649

Strand: Direct

Name: 77458718

Synonym: Pfl01_2493

Alternate gene names: NA

Gene position: 2851287-2851649 (Clockwise)

Preceding gene: 77458715

Following gene: 77458719

Centisome position: 44.29

GC content: 66.12

Gene sequence:

>363_bases
ATGCGGGCATCCCGATTCACCTGGCTGCTGATGCTGGCCGTTGCACTGGCCGGTTGCGGCGAAGACGCCAAACCCCCGAC
CTCATCCGGCATCGCCCCTGGTGCCATGCCCTCCGACCCGGCGCTGGCGCAGATCTACGCCAACAGCTGCCAGCTCTGCC
ACGCCAACCCCGCCGCCAATGCGCCGCTGACCGGCGACCGCAAGGCCTGGGAACCGCGCATCCAGCAGGGCGCCGACACG
CTGCTCGACCACGCCATCAATGGCTACAACGGCATGCCGCCGATGGGCCAGTGCGTCGAGTGCTCGGAAGAACAATTCCT
TCAGCTGATCGGCTTCATGGCCGATCAGCCGCTCCCAAAATAA

Upstream 100 bases:

>100_bases
CGGATGCCCCCCTCACTGTCCCGCAATGCCCTCAACCCGCCGCCGTTGCTGCCTTAAGGTGGGATCACAACAATAAGCGG
CACCTCACGCGAGGATCTTT

Downstream 100 bases:

>100_bases
GGATCCTGGCATGCCGATAGATCTGACACGCCGGCAGTTATTGCAACGGGCAAGCATCGTCGGCGCGTTCAGCGCGCTGG
CCTGCAATCCGGCGCTGGGC

Product: cytochrome c(mono-heme type)

Products: NA

Alternate protein names: Cytochrome C-Type Protein; Cytochrome C; Cytochrome C Family Protein; Cytochrome C Subfamily Protein; Cytochrome C Subfamily; Cytochrome C5-Like Protein; Cb-Type Cytochrome Oxidase Subunit III; Soluble Cytochrome CA; Class I Cytochrome C; Cytochrome C Class IE; Cytochrome

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MRASRFTWLLMLAVALAGCGEDAKPPTSSGIAPGAMPSDPALAQIYANSCQLCHANPAANAPLTGDRKAWEPRIQQGADT
LLDHAINGYNGMPPMGQCVECSEEQFLQLIGFMADQPLPK

Sequences:

>Translated_120_residues
MRASRFTWLLMLAVALAGCGEDAKPPTSSGIAPGAMPSDPALAQIYANSCQLCHANPAANAPLTGDRKAWEPRIQQGADT
LLDHAINGYNGMPPMGQCVECSEEQFLQLIGFMADQPLPK
>Mature_120_residues
MRASRFTWLLMLAVALAGCGEDAKPPTSSGIAPGAMPSDPALAQIYANSCQLCHANPAANAPLTGDRKAWEPRIQQGADT
LLDHAINGYNGMPPMGQCVECSEEQFLQLIGFMADQPLPK

Specific function: Unknown

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12741; Mature: 12741

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASRFTWLLMLAVALAGCGEDAKPPTSSGIAPGAMPSDPALAQIYANSCQLCHANPAAN
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
APLTGDRKAWEPRIQQGADTLLDHAINGYNGMPPMGQCVECSEEQFLQLIGFMADQPLPK
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRASRFTWLLMLAVALAGCGEDAKPPTSSGIAPGAMPSDPALAQIYANSCQLCHANPAAN
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
APLTGDRKAWEPRIQQGADTLLDHAINGYNGMPPMGQCVECSEEQFLQLIGFMADQPLPK
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA