| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is malR [H]
Identifier: 77458634
GI number: 77458634
Start: 2766307
End: 2766651
Strand: Direct
Name: malR [H]
Synonym: Pfl01_2407
Alternate gene names: 77458634
Gene position: 2766307-2766651 (Clockwise)
Preceding gene: 77458631
Following gene: 77458640
Centisome position: 42.97
GC content: 58.26
Gene sequence:
>345_bases TTGGGCATCCTGCACGCGCTGGGTGTGTACGGCACGATGCGCCATGCCGAGATCAAGCGACAGATGAGGGGCGTGACTCA GCGCATGTTGACCAAGACGCTGCGCTCACTGGAGCGTGATGGTCTTCTGATTCGACGGGAGTTCGGTGAAGTTCCGCCAC GTGTCGAATACGAGCTGACGCCACTGGGCATGGGACTTTTGGTCCGTATGTCGCCTGTGTGGACGTGGGTGGTCGAAAAC GTCGACGACATTCGCAAGGCACGTCGTGCTTTCGACAGTCAGGTTGACCAAAAACCTTCATGGCAAGTCCCTACGCCCAT GGCGGTCGATTCAGAGGTGCCTTAG
Upstream 100 bases:
>100_bases AGAGACTCTTGGCCAGGCAGAGAGGATCTGCCAGACGCTCAGAGACGATGATGATGGCGTCCGGCGAGAAGTCCTCACGC ATGCCGGCAGTCGCTGGTCG
Downstream 100 bases:
>100_bases GACGCTATTGTCCTGCCTGACTACGACGACTCACCGCGAGCATAAACCTCACAACTCGATCGCCCATGTCTGACTCACCA GCTCTTTGCCGAAGCTGTGA
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MGILHALGVYGTMRHAEIKRQMRGVTQRMLTKTLRSLERDGLLIRREFGEVPPRVEYELTPLGMGLLVRMSPVWTWVVEN VDDIRKARRAFDSQVDQKPSWQVPTPMAVDSEVP
Sequences:
>Translated_114_residues MGILHALGVYGTMRHAEIKRQMRGVTQRMLTKTLRSLERDGLLIRREFGEVPPRVEYELTPLGMGLLVRMSPVWTWVVEN VDDIRKARRAFDSQVDQKPSWQVPTPMAVDSEVP >Mature_113_residues GILHALGVYGTMRHAEIKRQMRGVTQRMLTKTLRSLERDGLLIRREFGEVPPRVEYELTPLGMGLLVRMSPVWTWVVENV DDIRKARRAFDSQVDQKPSWQVPTPMAVDSEVP
Specific function: Potential regulator of the malBH genes [H]
COG id: COG1733
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082391, Length=78, Percent_Identity=37.1794871794872, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002577 - InterPro: IPR011991 [H]
Pfam domain/function: PF01638 DUF24 [H]
EC number: NA
Molecular weight: Translated: 13130; Mature: 12998
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS51118 HTH_HXLR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILHALGVYGTMRHAEIKRQMRGVTQRMLTKTLRSLERDGLLIRREFGEVPPRVEYELT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCCCCCCEEEEC PLGMGLLVRMSPVWTWVVENVDDIRKARRAFDSQVDQKPSWQVPTPMAVDSEVP CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GILHALGVYGTMRHAEIKRQMRGVTQRMLTKTLRSLERDGLLIRREFGEVPPRVEYELT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCCCCCCEEEEC PLGMGLLVRMSPVWTWVVENVDDIRKARRAFDSQVDQKPSWQVPTPMAVDSEVP CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11882720 [H]