Click here to switch to the map view.

The map label for this gene is yfdH [C]

Identifier: 77457606

GI number: 77457606

Start: 1551932

End: 1552954

Strand: Direct

Name: yfdH [C]

Synonym: Pfl01_1379

Alternate gene names: 77457606

Gene position: 1551932-1552954 (Clockwise)

Preceding gene: 77457604

Following gene: 77457607

Centisome position: 24.1

GC content: 59.34

Gene sequence:

>1023_bases
ATGGCGTCGAACAGCGTTCGGCGACCGACAATCACTATAAGAAAGAGCAGTCCATTGACCCATCCGCACGGAACGCAACA
CGCGGGCCCGGTGAAGTTGTCGCTGGTGATCCCCGTATTCAATGAAGAGGACAGCCTCGACGGTTTTCTCCTGCGCATTC
GTCAGGTTTTCGAGCAAGAGACGCTGGTCGAACTGGAACTGGTGTTCGTCAATGACGGCAGTTCCGATACAACGCTGGAG
CGCTTGCTGAACTGCCAGCAGAGCGACTCGCGCATCCGTATCGTCGATCTGAGCCGCAATTTCGGCAAGGAAGCGGCGCT
GTCCGCCGGTTTGCAGACGGCCACCGGGCAAATCGTGGTGCCGATCGATGTCGATCTGCAGGATCCGCCCGAGGTCATCC
TGCAAATGATCGAGCGCTGGCGCGAAGGGTTTGAAGTGGTGCTTGGCCACCGCATCAGTCGGCGCAACGACTCCTGGGCC
AAGCAGACTTCCGCCGGTTGGTTCTATCGCCTGCACAACAAAATTGCCGAACAGGCATTACCGGAAAACGTCGGTGATTT
CCGGCTGATGGATCGCTGCGTGGTCGACGCGCTGCTGACACTGCCCGAATCCCGACGCTTCATGAAAGGCCTGTTCGCCT
GGGTCGGATTTCGCACCACCCAGGTCGAGTACGAACGCCCGGAGCGGGCAGCGGGGCAGAGCAAGTTCAATGGCTGGCGG
CTGTGGAATTTCGCCCTGGAGGGCATCACCAGTTTCAGCACCGAACCGTTGCGGATCTGGACGTATCTGGGAGCGCTGGT
CTCTCTGGTGTCGTTCGCCTTTGCGATGTTCATTGTGGTGCGCACGCTGATCCATGGCGTCGACATGCCCGGTTACGCCT
CGCTGATGGTTGCCGTGACGTTTCTCGGCGGTTTGCAGTTGATTGGCATCGGTGTGCTCGGCGAGTATCTGGGCCGCACT
TATATCGAAGCGAAGCGCCGGCCGGTTTTCCTGGTGCGCCGCATCTACGAATCCAAGGACTGA

Upstream 100 bases:

>100_bases
GCGCGGGCCAGAGCGCAGGGATCGTCCTCCGGATTGGCCGGAACGCCCTCGTTTCACCCTTGCATGACGTTCCGGGCTGC
TGCTTAATACGGAGCGGCTC

Downstream 100 bases:

>100_bases
CAGATGGATCTCAAGGAAACCGACATCCTCGGCGACAGCATCGGCGAACATTGGTATTACTGCTCCAAAGCGGCCGCGAC
CCGTCGTTTGCTGGGTGAAG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MASNSVRRPTITIRKSSPLTHPHGTQHAGPVKLSLVIPVFNEEDSLDGFLLRIRQVFEQETLVELELVFVNDGSSDTTLE
RLLNCQQSDSRIRIVDLSRNFGKEAALSAGLQTATGQIVVPIDVDLQDPPEVILQMIERWREGFEVVLGHRISRRNDSWA
KQTSAGWFYRLHNKIAEQALPENVGDFRLMDRCVVDALLTLPESRRFMKGLFAWVGFRTTQVEYERPERAAGQSKFNGWR
LWNFALEGITSFSTEPLRIWTYLGALVSLVSFAFAMFIVVRTLIHGVDMPGYASLMVAVTFLGGLQLIGIGVLGEYLGRT
YIEAKRRPVFLVRRIYESKD

Sequences:

>Translated_340_residues
MASNSVRRPTITIRKSSPLTHPHGTQHAGPVKLSLVIPVFNEEDSLDGFLLRIRQVFEQETLVELELVFVNDGSSDTTLE
RLLNCQQSDSRIRIVDLSRNFGKEAALSAGLQTATGQIVVPIDVDLQDPPEVILQMIERWREGFEVVLGHRISRRNDSWA
KQTSAGWFYRLHNKIAEQALPENVGDFRLMDRCVVDALLTLPESRRFMKGLFAWVGFRTTQVEYERPERAAGQSKFNGWR
LWNFALEGITSFSTEPLRIWTYLGALVSLVSFAFAMFIVVRTLIHGVDMPGYASLMVAVTFLGGLQLIGIGVLGEYLGRT
YIEAKRRPVFLVRRIYESKD
>Mature_339_residues
ASNSVRRPTITIRKSSPLTHPHGTQHAGPVKLSLVIPVFNEEDSLDGFLLRIRQVFEQETLVELELVFVNDGSSDTTLER
LLNCQQSDSRIRIVDLSRNFGKEAALSAGLQTATGQIVVPIDVDLQDPPEVILQMIERWREGFEVVLGHRISRRNDSWAK
QTSAGWFYRLHNKIAEQALPENVGDFRLMDRCVVDALLTLPESRRFMKGLFAWVGFRTTQVEYERPERAAGQSKFNGWRL
WNFALEGITSFSTEPLRIWTYLGALVSLVSFAFAMFIVVRTLIHGVDMPGYASLMVAVTFLGGLQLIGIGVLGEYLGRTY
IEAKRRPVFLVRRIYESKD

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=306, Percent_Identity=53.5947712418301, Blast_Score=338, Evalue=2e-94,
Organism=Escherichia coli, GI1788588, Length=308, Percent_Identity=33.1168831168831, Blast_Score=177, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24585265, Length=235, Percent_Identity=26.3829787234043, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 38531; Mature: 38400

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNSVRRPTITIRKSSPLTHPHGTQHAGPVKLSLVIPVFNEEDSLDGFLLRIRQVFEQE
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHC
TLVELELVFVNDGSSDTTLERLLNCQQSDSRIRIVDLSRNFGKEAALSAGLQTATGQIVV
CEEEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCHHCCCCEEE
PIDVDLQDPPEVILQMIERWREGFEVVLGHRISRRNDSWAKQTSAGWFYRLHNKIAEQAL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHC
PENVGDFRLMDRCVVDALLTLPESRRFMKGLFAWVGFRTTQVEYERPERAAGQSKFNGWR
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCHHHCCCCCCCCEE
LWNFALEGITSFSTEPLRIWTYLGALVSLVSFAFAMFIVVRTLIHGVDMPGYASLMVAVT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FLGGLQLIGIGVLGEYLGRTYIEAKRRPVFLVRRIYESKD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ASNSVRRPTITIRKSSPLTHPHGTQHAGPVKLSLVIPVFNEEDSLDGFLLRIRQVFEQE
CCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHC
TLVELELVFVNDGSSDTTLERLLNCQQSDSRIRIVDLSRNFGKEAALSAGLQTATGQIVV
CEEEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCHHCCCCEEE
PIDVDLQDPPEVILQMIERWREGFEVVLGHRISRRNDSWAKQTSAGWFYRLHNKIAEQAL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHC
PENVGDFRLMDRCVVDALLTLPESRRFMKGLFAWVGFRTTQVEYERPERAAGQSKFNGWR
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCHHHCCCCCCCCEE
LWNFALEGITSFSTEPLRIWTYLGALVSLVSFAFAMFIVVRTLIHGVDMPGYASLMVAVT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FLGGLQLIGIGVLGEYLGRTYIEAKRRPVFLVRRIYESKD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]