| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457599
Identifier: 77457599
GI number: 77457599
Start: 1545210
End: 1546325
Strand: Direct
Name: 77457599
Synonym: Pfl01_1372
Alternate gene names: NA
Gene position: 1545210-1546325 (Clockwise)
Preceding gene: 77457598
Following gene: 77457600
Centisome position: 24.0
GC content: 61.2
Gene sequence:
>1116_bases ATGAAGCGAATGGCCGGACTTTCCGCACTTGCCTTGATTATCTCCAGCACCAGTGGCTGCGGATGGATCTGGGGCCCGGA AGGTTATTTCCGTGACCGTGGTAGCGATTACCTGGAAGCGCAACAGACTGCACCGATGCAACTGCCACCGGACGTCAGCA CCTCCAAGCGCCTGGATCCGCTGCTGCCGATCCCGCGCAACGTGGCCGACGACACCGCCAAGGGTGAATACATCGTTCCG CGCCCTCAACCGCTGTCGACCGTTGCCGATGCCAGCGACTACTCGCTGCAGAAGAGCGGTGATTCGCGTTGGGTCATGGC CCAGCATCCACCGGCCGAAGTCTGGCCAGTGGCGGTGCAATACTTCCAGGACAACGGTTTCCGTCTGGATGAACAGCGTC CGCAAACCGGCGAATTCACCACCACCTGGCAGCATTCCGACGAACTGTCCGCCGCCATGGCCAAGCGTCTGAGCGCCGCC GGCGTCAGCACCGACAGCGAAACCCGCGTGCGGGTACGTATCGAGCCAGGCGTGCAGCGCAACACCAGTGAAGTCTATGT GGTCAGCGCCGAGCGTCCTGCCGGCAGCACTGCCAATGTCGATTTCACCAACCGTTCGGTCAACACCGGTCTCGACGCCG CGCTGGTCGACGACATGCTCGCGAGCATGAGCCGTACCTCCGAGAAGGGTGGTTCGGTATCGATGCTGGCTTCGCGTGAT TTCGACACCCCGAGCCGTGTCAGCCTGAGCGAAGACGGCAGCGGCAACCCGGTACTGAACGTCGGTACGGACCTGGATCG TGCCTGGTCGAGCGTCGGTCGTGCGCTGGAACAGGGCGAATGGCGCGTTGAAGACATCAACCGCAGCCTGGGTCTCTACT ACATCAACTTGTCCGAAAAGGCCGAGAAGAAAGACGAGAAACCTGGTTTCTTCAGCAGCCTGTTCGGCAGCGCGCCGACC AAGGAAGAAGTTGAAGCTCGCGCCGAGCGTTATCAGGTTCGCCTGAGCAAGGTCGGCGAGAACGTTCAGGTCACCGTCGA GAAAAACATCAACACCGTTGCGCCGGCCGATGTGGCCCGCAAAGTGTTGAGCGTGATTCAGGACAACCTGGGCTGA
Upstream 100 bases:
>100_bases TCCGCCTGCCGCTGACCTGGCTGAGCGCTCCTTGTCATGAAACGCTGCGCTCGGCCCTGCGCCAGTGCAACGTCCTGGTT TAATTGAGGAAGTACAACGC
Downstream 100 bases:
>100_bases TCCAATGCGTTTTGCCGTTCTCGGCAGCGGTAGCCAAGGGAACGGCACGCTGATCGCCAGTGCTGATACGTATGTGCTGG TGGATTGTGGTTTTTCCCTG
Product: putative lipoprotein
Products: NA
Alternate protein names: NlpB/DapX Family Lipoprotein; NlpBDapX Lipoprotein; NlpB/DapX Lipoprotein; NlpBDapX Family Lipoprotein; Transmembrane Protein; Transmembrane Lipoprotein; Outer Membrane Lipoprotein
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKRMAGLSALALIISSTSGCGWIWGPEGYFRDRGSDYLEAQQTAPMQLPPDVSTSKRLDPLLPIPRNVADDTAKGEYIVP RPQPLSTVADASDYSLQKSGDSRWVMAQHPPAEVWPVAVQYFQDNGFRLDEQRPQTGEFTTTWQHSDELSAAMAKRLSAA GVSTDSETRVRVRIEPGVQRNTSEVYVVSAERPAGSTANVDFTNRSVNTGLDAALVDDMLASMSRTSEKGGSVSMLASRD FDTPSRVSLSEDGSGNPVLNVGTDLDRAWSSVGRALEQGEWRVEDINRSLGLYYINLSEKAEKKDEKPGFFSSLFGSAPT KEEVEARAERYQVRLSKVGENVQVTVEKNINTVAPADVARKVLSVIQDNLG
Sequences:
>Translated_371_residues MKRMAGLSALALIISSTSGCGWIWGPEGYFRDRGSDYLEAQQTAPMQLPPDVSTSKRLDPLLPIPRNVADDTAKGEYIVP RPQPLSTVADASDYSLQKSGDSRWVMAQHPPAEVWPVAVQYFQDNGFRLDEQRPQTGEFTTTWQHSDELSAAMAKRLSAA GVSTDSETRVRVRIEPGVQRNTSEVYVVSAERPAGSTANVDFTNRSVNTGLDAALVDDMLASMSRTSEKGGSVSMLASRD FDTPSRVSLSEDGSGNPVLNVGTDLDRAWSSVGRALEQGEWRVEDINRSLGLYYINLSEKAEKKDEKPGFFSSLFGSAPT KEEVEARAERYQVRLSKVGENVQVTVEKNINTVAPADVARKVLSVIQDNLG >Mature_371_residues MKRMAGLSALALIISSTSGCGWIWGPEGYFRDRGSDYLEAQQTAPMQLPPDVSTSKRLDPLLPIPRNVADDTAKGEYIVP RPQPLSTVADASDYSLQKSGDSRWVMAQHPPAEVWPVAVQYFQDNGFRLDEQRPQTGEFTTTWQHSDELSAAMAKRLSAA GVSTDSETRVRVRIEPGVQRNTSEVYVVSAERPAGSTANVDFTNRSVNTGLDAALVDDMLASMSRTSEKGGSVSMLASRD FDTPSRVSLSEDGSGNPVLNVGTDLDRAWSSVGRALEQGEWRVEDINRSLGLYYINLSEKAEKKDEKPGFFSSLFGSAPT KEEVEARAERYQVRLSKVGENVQVTVEKNINTVAPADVARKVLSVIQDNLG
Specific function: Unknown
COG id: COG3317
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40566; Mature: 40566
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMAGLSALALIISSTSGCGWIWGPEGYFRDRGSDYLEAQQTAPMQLPPDVSTSKRLDP CCCHHHHHHHHHHHCCCCCCEEEECCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC LLPIPRNVADDTAKGEYIVPRPQPLSTVADASDYSLQKSGDSRWVMAQHPPAEVWPVAVQ CCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCEEECCCCCCEEEECCCCCHHHHHHHE YFQDNGFRLDEQRPQTGEFTTTWQHSDELSAAMAKRLSAAGVSTDSETRVRVRIEPGVQR EECCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC NTSEVYVVSAERPAGSTANVDFTNRSVNTGLDAALVDDMLASMSRTSEKGGSVSMLASRD CCCEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC FDTPSRVSLSEDGSGNPVLNVGTDLDRAWSSVGRALEQGEWRVEDINRSLGLYYINLSEK CCCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEHHCCCCEEEEEECCHH AEKKDEKPGFFSSLFGSAPTKEEVEARAERYQVRLSKVGENVQVTVEKNINTVAPADVAR HHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH KVLSVIQDNLG HHHHHHHHCCC >Mature Secondary Structure MKRMAGLSALALIISSTSGCGWIWGPEGYFRDRGSDYLEAQQTAPMQLPPDVSTSKRLDP CCCHHHHHHHHHHHCCCCCCEEEECCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC LLPIPRNVADDTAKGEYIVPRPQPLSTVADASDYSLQKSGDSRWVMAQHPPAEVWPVAVQ CCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCEEECCCCCCEEEECCCCCHHHHHHHE YFQDNGFRLDEQRPQTGEFTTTWQHSDELSAAMAKRLSAAGVSTDSETRVRVRIEPGVQR EECCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC NTSEVYVVSAERPAGSTANVDFTNRSVNTGLDAALVDDMLASMSRTSEKGGSVSMLASRD CCCEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC FDTPSRVSLSEDGSGNPVLNVGTDLDRAWSSVGRALEQGEWRVEDINRSLGLYYINLSEK CCCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEHHCCCCEEEEEECCHH AEKKDEKPGFFSSLFGSAPTKEEVEARAERYQVRLSKVGENVQVTVEKNINTVAPADVAR HHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH KVLSVIQDNLG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA