Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457572
Identifier: 77457572
GI number: 77457572
Start: 1521114
End: 1521515
Strand: Direct
Name: 77457572
Synonym: Pfl01_1345
Alternate gene names: NA
Gene position: 1521114-1521515 (Clockwise)
Preceding gene: 77457571
Following gene: 77457573
Centisome position: 23.63
GC content: 60.7
Gene sequence:
>402_bases ATGTATCGCCGAATTCTTCTGTTTACCGTGATGCTTTTTTCCCTTGGCGGATGCGTCCCTTATTCCTACGGAGATGGCTA CTACAGCTCAGAGGTCTACACATCGCAGGCACCTTCGTACTACAGCGGCGGCACCTACTACAGCGGCGGCAGCACGTACT ACTCGGCGCCGCGCTACTACCAGCCAGCACCGCGCTATTACCAACCGGCGCCCCGTTATTATTCAGCGCCCCGTTACTAC CAACCGGCCCCGCGCTACTACGAGAACCGTCGCTGGCACGGTCATGATCGCGGACGCTGGGACGACCACCGTCGCGGTGG CTGGGATGACCGCCGGGGTCGTGGCAATTACGACCGTCACAGTGGACGTGGCGATTACGGCCGACACGGCAACCGCTGGT AA
Upstream 100 bases:
>100_bases GGATGCCGAAATCGCTGTCAGATATTTCGTCAGTCGCCGAATGAAAGACTGACGCCTGCCAGCGTCGCTGGTGTGGCTAC CCGCGGTCCAGGAGGCCGCC
Downstream 100 bases:
>100_bases CCCCCGCAAAAAAAGCGGCGCATTGAGCGCCGCTTTTTTTGTACCTGGTGTCTCGTCCTGAATAAGGTTTACACCTTCTG ACCCATTCTCAGGAGGGAGT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MYRRILLFTVMLFSLGGCVPYSYGDGYYSSEVYTSQAPSYYSGGTYYSGGSTYYSAPRYYQPAPRYYQPAPRYYSAPRYY QPAPRYYENRRWHGHDRGRWDDHRRGGWDDRRGRGNYDRHSGRGDYGRHGNRW
Sequences:
>Translated_133_residues MYRRILLFTVMLFSLGGCVPYSYGDGYYSSEVYTSQAPSYYSGGTYYSGGSTYYSAPRYYQPAPRYYQPAPRYYSAPRYY QPAPRYYENRRWHGHDRGRWDDHRRGGWDDRRGRGNYDRHSGRGDYGRHGNRW >Mature_133_residues MYRRILLFTVMLFSLGGCVPYSYGDGYYSSEVYTSQAPSYYSGGTYYSGGSTYYSAPRYYQPAPRYYQPAPRYYSAPRYY QPAPRYYENRRWHGHDRGRWDDHRRGGWDDRRGRGNYDRHSGRGDYGRHGNRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15919; Mature: 15919
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRRILLFTVMLFSLGGCVPYSYGDGYYSSEVYTSQAPSYYSGGTYYSGGSTYYSAPRYY CCHHHHHHHHHHHHHCCCCCCCCCCCEECCCEECCCCCCCCCCCCEECCCCEEECCCCCC QPAPRYYQPAPRYYSAPRYYQPAPRYYENRRWHGHDRGRWDDHRRGGWDDRRGRGNYDRH CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGRGDYGRHGNRW CCCCCCCCCCCCC >Mature Secondary Structure MYRRILLFTVMLFSLGGCVPYSYGDGYYSSEVYTSQAPSYYSGGTYYSGGSTYYSAPRYY CCHHHHHHHHHHHHHCCCCCCCCCCCEECCCEECCCCCCCCCCCCEECCCCEEECCCCCC QPAPRYYQPAPRYYSAPRYYQPAPRYYENRRWHGHDRGRWDDHRRGGWDDRRGRGNYDRH CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGRGDYGRHGNRW CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA