Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457515
Identifier: 77457515
GI number: 77457515
Start: 1463495
End: 1464424
Strand: Direct
Name: 77457515
Synonym: Pfl01_1288
Alternate gene names: NA
Gene position: 1463495-1464424 (Clockwise)
Preceding gene: 77457512
Following gene: 77457516
Centisome position: 22.73
GC content: 66.24
Gene sequence:
>930_bases ATGACAGCCCACGAGGAGCCTCTGATGACCTGGTCGACCCTGCTTGAATGCCGCGAACGCCTGCCCGCCGTTGTCGACCT GGCGGAGGGCTTCGCCACGTTGCTGCAGCAACTGGGCAGCGTCACGCCGTTCGAACTGGCGGTGGCGGGAGGGCGGCGAA TGGCGACGCCGGGGCTGGCGTTTCTGGTGGGTTATCAGGCGGCGCTGCGCATGCTCTGGCCGAGCGCGCCGCCGAGCCTG GGCGCGTTGTGTGCGACCGAGCAGCGCAGCCTGCGCCCGGCGGACATGCAGACCCGGCTCACGGATCTGCGCCTCACCGG GCGAAAGGATTTCGTCACTGCCGGCGACGCGGCGGACTGGCTGCTTATCGCCGCGCGCAGTGAGCAACCCGACGAATCAC CGCGCCTGAGTCTGGCGGTGGTGTATCCCGGCGAACCCGGCGTGCGGGTGGAAAAACTCCCGGCGCTGCCGTTGATGCCG GACATCAGCCATGGTCGGCTGCATCTCGACGATGCGTTGTGCGAGTTGCTCGCCGGGGACGGTTGGGATGCTTACGTCAA ACCGTTCCGCACCCTTGAAGACGTATACGTGTTGAGCGCAATGACCGCGTGGCTGTACGGCGTCGGTCAGGACAGCGGCT GGCCGCAGCCGTTGCAATTGCGCTTGCTGGCGCTGTTGGCCGGTTGCGCGGAAGTCAGTCGCCAGCCGCCGAACAACCCT GCCGGGCATGTGTTGCTCGGCGGATTGTTTGCGCAGTTCGACGGGCTTAACGCGGAGGTCGATCAGGCCCTGCGTGACGG TAATCCTGAGTGGGCGACGATGTGGCAGCGCGATCAATCGGTCATGCAACTGGCGGTGGGTGCGCGGGCCAAACGCCTGG CCAAGGCGTTGGCGGCAAACCAAAACACATCTGTCATGAACGCCGGCTAG
Upstream 100 bases:
>100_bases CATGGGTTGCAGCCGATCGACTTTCTTTATGCAGCCGTGTTGTGCAAAGTCAGGCTATGTAGCCCCGGTGTCATCGCCAT GAATGTTTGGTGATGCTTAT
Downstream 100 bases:
>100_bases TCTTCTCAGGTTCATTCCCAGAGCCCTCGCCATGTTCAAAGGCCTGTCCCTGTTTCTGCTGCTGATCAGCTTCACGGTTC AGGCCGAACAATGGCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTAHEEPLMTWSTLLECRERLPAVVDLAEGFATLLQQLGSVTPFELAVAGGRRMATPGLAFLVGYQAALRMLWPSAPPSL GALCATEQRSLRPADMQTRLTDLRLTGRKDFVTAGDAADWLLIAARSEQPDESPRLSLAVVYPGEPGVRVEKLPALPLMP DISHGRLHLDDALCELLAGDGWDAYVKPFRTLEDVYVLSAMTAWLYGVGQDSGWPQPLQLRLLALLAGCAEVSRQPPNNP AGHVLLGGLFAQFDGLNAEVDQALRDGNPEWATMWQRDQSVMQLAVGARAKRLAKALAANQNTSVMNAG
Sequences:
>Translated_309_residues MTAHEEPLMTWSTLLECRERLPAVVDLAEGFATLLQQLGSVTPFELAVAGGRRMATPGLAFLVGYQAALRMLWPSAPPSL GALCATEQRSLRPADMQTRLTDLRLTGRKDFVTAGDAADWLLIAARSEQPDESPRLSLAVVYPGEPGVRVEKLPALPLMP DISHGRLHLDDALCELLAGDGWDAYVKPFRTLEDVYVLSAMTAWLYGVGQDSGWPQPLQLRLLALLAGCAEVSRQPPNNP AGHVLLGGLFAQFDGLNAEVDQALRDGNPEWATMWQRDQSVMQLAVGARAKRLAKALAANQNTSVMNAG >Mature_308_residues TAHEEPLMTWSTLLECRERLPAVVDLAEGFATLLQQLGSVTPFELAVAGGRRMATPGLAFLVGYQAALRMLWPSAPPSLG ALCATEQRSLRPADMQTRLTDLRLTGRKDFVTAGDAADWLLIAARSEQPDESPRLSLAVVYPGEPGVRVEKLPALPLMPD ISHGRLHLDDALCELLAGDGWDAYVKPFRTLEDVYVLSAMTAWLYGVGQDSGWPQPLQLRLLALLAGCAEVSRQPPNNPA GHVLLGGLFAQFDGLNAEVDQALRDGNPEWATMWQRDQSVMQLAVGARAKRLAKALAANQNTSVMNAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33459; Mature: 33328
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHEEPLMTWSTLLECRERLPAVVDLAEGFATLLQQLGSVTPFELAVAGGRRMATPGLA CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHH FLVGYQAALRMLWPSAPPSLGALCATEQRSLRPADMQTRLTDLRLTGRKDFVTAGDAADW HHHHHHHHHHHHCCCCCCCCHHHHHCHHHCCCCCHHHHHHHHHEECCCCCEEECCCCCCE LLIAARSEQPDESPRLSLAVVYPGEPGVRVEKLPALPLMPDISHGRLHLDDALCELLAGD EEEEECCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCC GWDAYVKPFRTLEDVYVLSAMTAWLYGVGQDSGWPQPLQLRLLALLAGCAEVSRQPPNNP CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC AGHVLLGGLFAQFDGLNAEVDQALRDGNPEWATMWQRDQSVMQLAVGARAKRLAKALAAN CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QNTSVMNAG CCCCEECCC >Mature Secondary Structure TAHEEPLMTWSTLLECRERLPAVVDLAEGFATLLQQLGSVTPFELAVAGGRRMATPGLA CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHH FLVGYQAALRMLWPSAPPSLGALCATEQRSLRPADMQTRLTDLRLTGRKDFVTAGDAADW HHHHHHHHHHHHCCCCCCCCHHHHHCHHHCCCCCHHHHHHHHHEECCCCCEEECCCCCCE LLIAARSEQPDESPRLSLAVVYPGEPGVRVEKLPALPLMPDISHGRLHLDDALCELLAGD EEEEECCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCC GWDAYVKPFRTLEDVYVLSAMTAWLYGVGQDSGWPQPLQLRLLALLAGCAEVSRQPPNNP CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC AGHVLLGGLFAQFDGLNAEVDQALRDGNPEWATMWQRDQSVMQLAVGARAKRLAKALAAN CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QNTSVMNAG CCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA