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The map label for this gene is yecD [C]

Identifier: 77457442

GI number: 77457442

Start: 1389019

End: 1389576

Strand: Direct

Name: yecD [C]

Synonym: Pfl01_1215

Alternate gene names: 77457442

Gene position: 1389019-1389576 (Clockwise)

Preceding gene: 77457430

Following gene: 77457447

Centisome position: 21.57

GC content: 60.39

Gene sequence:

>558_bases
ATGGAGCTTCAGGCCAACGCTGCACTGATCATCATCGACCAGCAAAAAGGCATCCTGCAGCCGCGTCTGGGTCGGCGGAA
TAATCCGTTGGCCGAAGAACGAATCCTCGACGTGCTGAAATTCTGGCGGCGCAGCGGTCGGCCGGTGATCCACGTGCAGC
ACTTGTCGCGCTCGCCGGATTCGGTGTTCTGGCCCGAGCAGTCAGGCGTGGATTTTCAGGAAAGGTTTCTGCCGCAGGAC
GACGAGTGGCTGATTCAGAAACAGGTGCCGGATGCGTTTTGTGCGACGGGGCTTGAGGCGAAGTTGCGTGAGGCGGGGAT
GGGACAGTTGATCATTGTCGGCGTGGCGACGAACAACTCGGTGGAATCCACGGCGCGCACGGCGGGCAATCTGGGGTTTG
ACGCGTGGGTGGCGGAGGATGCGTGCTTTACCTTCGACAAGGCCGACTATTTCGGCACGTTGCGTTCGGCTGAGGAGGTG
CATGCGATGTCGCTGGGGAATCTGCACGGGGAGTATGCGACGGTGATCAGCAGTGCCGGGATTCTTGAGGCAGTCTGA

Upstream 100 bases:

>100_bases
CGGCTTCAGGTTGTCCTGTGTGCGTTCGATAGCTTGCTTAGTCACAGGAGGTGATGCTCAAGTACGGGAAATTCAATGAC
CCCGCGTGAGAAAAATCGCC

Downstream 100 bases:

>100_bases
TACTGATCGGGGAGTGCGCCGGCCTCATCGCTGGCAAGCCAGCTCCCACATTCGACCGAGTTGCTCCTGATGGAGCGCGA
TCCTTGTGGTAGCGAGCTTG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MELQANAALIIIDQQKGILQPRLGRRNNPLAEERILDVLKFWRRSGRPVIHVQHLSRSPDSVFWPEQSGVDFQERFLPQD
DEWLIQKQVPDAFCATGLEAKLREAGMGQLIIVGVATNNSVESTARTAGNLGFDAWVAEDACFTFDKADYFGTLRSAEEV
HAMSLGNLHGEYATVISSAGILEAV

Sequences:

>Translated_185_residues
MELQANAALIIIDQQKGILQPRLGRRNNPLAEERILDVLKFWRRSGRPVIHVQHLSRSPDSVFWPEQSGVDFQERFLPQD
DEWLIQKQVPDAFCATGLEAKLREAGMGQLIIVGVATNNSVESTARTAGNLGFDAWVAEDACFTFDKADYFGTLRSAEEV
HAMSLGNLHGEYATVISSAGILEAV
>Mature_185_residues
MELQANAALIIIDQQKGILQPRLGRRNNPLAEERILDVLKFWRRSGRPVIHVQHLSRSPDSVFWPEQSGVDFQERFLPQD
DEWLIQKQVPDAFCATGLEAKLREAGMGQLIIVGVATNNSVESTARTAGNLGFDAWVAEDACFTFDKADYFGTLRSAEEV
HAMSLGNLHGEYATVISSAGILEAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=200, Percent_Identity=33, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20495; Mature: 20495

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELQANAALIIIDQQKGILQPRLGRRNNPLAEERILDVLKFWRRSGRPVIHVQHLSRSPD
CCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
SVFWPEQSGVDFQERFLPQDDEWLIQKQVPDAFCATGLEAKLREAGMGQLIIVGVATNNS
CEECCCCCCCCHHHHHCCCCCHHHHHHCCCHHHHHCCCHHHHHHCCCCEEEEEEEECCCC
VESTARTAGNLGFDAWVAEDACFTFDKADYFGTLRSAEEVHAMSLGNLHGEYATVISSAG
HHHHHHHHCCCCCHHEECCCCEEEECCHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHCCC
ILEAV
HHHCC
>Mature Secondary Structure
MELQANAALIIIDQQKGILQPRLGRRNNPLAEERILDVLKFWRRSGRPVIHVQHLSRSPD
CCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
SVFWPEQSGVDFQERFLPQDDEWLIQKQVPDAFCATGLEAKLREAGMGQLIIVGVATNNS
CEECCCCCCCCHHHHHCCCCCHHHHHHCCCHHHHHCCCHHHHHHCCCCEEEEEEEECCCC
VESTARTAGNLGFDAWVAEDACFTFDKADYFGTLRSAEEVHAMSLGNLHGEYATVISSAG
HHHHHHHHCCCCCHHEECCCCEEEECCHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHCCC
ILEAV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA