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The map label for this gene is dcd

Identifier: 77457429

GI number: 77457429

Start: 1374064

End: 1374630

Strand: Direct

Name: dcd

Synonym: Pfl01_1202

Alternate gene names: 77457429

Gene position: 1374064-1374630 (Clockwise)

Preceding gene: 77457427

Following gene: 77457430

Centisome position: 21.34

GC content: 58.38

Gene sequence:

>567_bases
ATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTTCGTCGAGCGCCAGGT
ACGTGGCAGTGACGACAGCCGTGTGATCTCCTACGGTGTGTCGAGCTACGGCTACGATGTGCGTTGCACCAATCATTTCA
AGGTGTTCACCAACATCAATTCGGCCATCGTCGATCCGAAAAACTTCGACGCCGGCAGTTTTGTCGACGTCCACAGCGAT
GTCTGCATCATTCCGCCGAACTCCTTTGCCTTGGCCACGACCGTTGAATACTTCCGTATTCCACGCAACGTCCTGACCAT
CTGCCTGGGCAAGAGCACTTACGCCCGTTGCGGCATCATCGTCAACGTCACCCCGCTCGAGCCCGAGTGGGAAGGCCAGG
TGACCCTGGAGTTCTCCAACACCACCAACCTGCCGGCGAAGATCTACGCGAATGAAGGCGTGGCGCAGATGCTGTTCCTC
GAATCCGACGAGGAATGCGAAGTGTCCTACAAGGACCGTGCCGGCAAATACCAGGGCCAGCGTGGCGTGACCCTGCCGCG
CACCTGA

Upstream 100 bases:

>100_bases
GCACGTTCGCCGAGATTTGCAGCCCGGACTTTGAACCCGGCGGCGCGCCCGGTAAGATGCCGGACAGATTTTTTCCACCT
CGCTATTCAGGACACCCGCC

Downstream 100 bases:

>100_bases
TCCGTCCATCCGGCAGTTACCGGGAATTCTTCGGCGGGTAGACACTCTATGAGGTGTACTGCCCGTTTCGCGAACAGCGG
GACGGGCCTTCGCCGAGGAG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSIKSDKWIRRMAQEHGMIEPFVERQVRGSDDSRVISYGVSSYGYDVRCTNHFKVFTNINSAIVDPKNFDAGSFVDVHSD
VCIIPPNSFALATTVEYFRIPRNVLTICLGKSTYARCGIIVNVTPLEPEWEGQVTLEFSNTTNLPAKIYANEGVAQMLFL
ESDEECEVSYKDRAGKYQGQRGVTLPRT

Sequences:

>Translated_188_residues
MSIKSDKWIRRMAQEHGMIEPFVERQVRGSDDSRVISYGVSSYGYDVRCTNHFKVFTNINSAIVDPKNFDAGSFVDVHSD
VCIIPPNSFALATTVEYFRIPRNVLTICLGKSTYARCGIIVNVTPLEPEWEGQVTLEFSNTTNLPAKIYANEGVAQMLFL
ESDEECEVSYKDRAGKYQGQRGVTLPRT
>Mature_187_residues
SIKSDKWIRRMAQEHGMIEPFVERQVRGSDDSRVISYGVSSYGYDVRCTNHFKVFTNINSAIVDPKNFDAGSFVDVHSDV
CIIPPNSFALATTVEYFRIPRNVLTICLGKSTYARCGIIVNVTPLEPEWEGQVTLEFSNTTNLPAKIYANEGVAQMLFLE
SDEECEVSYKDRAGKYQGQRGVTLPRT

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

Organism=Escherichia coli, GI1788379, Length=156, Percent_Identity=28.8461538461538, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_PSEPF (Q3KH11)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_346934.1
- ProteinModelPortal:   Q3KH11
- SMR:   Q3KH11
- STRING:   Q3KH11
- GeneID:   3716974
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_1202
- eggNOG:   COG0717
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- ProtClustDB:   PRK00416
- BioCyc:   PFLU205922:PFL_1202-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21174; Mature: 21043

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSDKWIRRMAQEHGMIEPFVERQVRGSDDSRVISYGVSSYGYDVRCTNHFKVFTNIN
CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCEEEEEECC
SAIVDPKNFDAGSFVDVHSDVCIIPPNSFALATTVEYFRIPRNVLTICLGKSTYARCGII
CEEECCCCCCCCCEEEECCCEEEECCCCEEEHHHHHHHHCCCHHEEEEECCCCHHHCEEE
VNVTPLEPEWEGQVTLEFSNTTNLPAKIYANEGVAQMLFLESDEECEVSYKDRAGKYQGQ
EEEECCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCC
RGVTLPRT
CCCCCCCC
>Mature Secondary Structure 
SIKSDKWIRRMAQEHGMIEPFVERQVRGSDDSRVISYGVSSYGYDVRCTNHFKVFTNIN
CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCEEEEEECC
SAIVDPKNFDAGSFVDVHSDVCIIPPNSFALATTVEYFRIPRNVLTICLGKSTYARCGII
CEEECCCCCCCCCEEEECCCEEEECCCCEEEHHHHHHHHCCCHHEEEEECCCCHHHCEEE
VNVTPLEPEWEGQVTLEFSNTTNLPAKIYANEGVAQMLFLESDEECEVSYKDRAGKYQGQ
EEEECCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCC
RGVTLPRT
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA