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The map label for this gene is agmR [H]

Identifier: 77457409

GI number: 77457409

Start: 1351126

End: 1351776

Strand: Direct

Name: agmR [H]

Synonym: Pfl01_1182

Alternate gene names: 77457409

Gene position: 1351126-1351776 (Clockwise)

Preceding gene: 77457408

Following gene: 77457410

Centisome position: 20.99

GC content: 58.99

Gene sequence:

>651_bases
ATGGCCACATACGACATCCTGATTGCCGATGATCACCCTCTTTTTCGTAGCGCACTGCATCAAGCGGTGACGATGGGCCT
TGGCCCGGACGTACGAATGGTGGAGGTGGCGAGCATCGCCGAGCTGGAAACCCGCCTGACCGAAAAGGCTGACTGGGATC
TGGTGCTGCTGGACCTGAACATGCCGGGCGCTTTCGGATTTTCCGGGCTGGTGATGCTGCGCGGTCAATACCCGCAGATT
CCGGTGGTGATGGTTTCGGCCCAGGAAGAAGCCTCGGTGATGGTCAAGTCCCGGGAATTCGGTGCCAGTGGTTTCATTCC
CAAGTCCAGCGACCTGAGCGTGATTCAGGAAGCGGTGCGTAAAGTGTTGGACGGGGACGTGTTCTGGCCACCCCAGGCGT
TCGAAGCGGTCAGCGTTTCGGATGAAGCCAAGGCTGCCAGCGATGGCCTCGCCAGCCTGACGCCACAGCAGTTCCGGGTG
TTGACCATGGTCTGCGAAGGCTTGTTGAACAAGCAGATCGCCTACGAGCTGAGCGTGTCCGAAGCGACCATCAAGGCCCA
CGTCACGGCGATTTTTCGCAAGTTGAACGTGCGAACCCGGACCCAGGCCGCTTTACTGCTGCAACAACTTGAGTCAATTC
CGAGCCAGTAA

Upstream 100 bases:

>100_bases
GAACGTGCCCCTGTGGATGCCGCTGCCGGGCGGTATCTGGATTTGCTTTGGCACGACCCGAATGCGCGGGCCGGCCATCA
AAAACAGGATCATTTGAAAA

Downstream 100 bases:

>100_bases
GCGCTGGCGTCTTCACGCTTTTTTGACTTTCGTTGATCTAGCTTCCCCACTTCCTTTCGGTCGGTTATCTACTTTATGTC
ACCTTTCAAGGGCCAGACGG

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MATYDILIADDHPLFRSALHQAVTMGLGPDVRMVEVASIAELETRLTEKADWDLVLLDLNMPGAFGFSGLVMLRGQYPQI
PVVMVSAQEEASVMVKSREFGASGFIPKSSDLSVIQEAVRKVLDGDVFWPPQAFEAVSVSDEAKAASDGLASLTPQQFRV
LTMVCEGLLNKQIAYELSVSEATIKAHVTAIFRKLNVRTRTQAALLLQQLESIPSQ

Sequences:

>Translated_216_residues
MATYDILIADDHPLFRSALHQAVTMGLGPDVRMVEVASIAELETRLTEKADWDLVLLDLNMPGAFGFSGLVMLRGQYPQI
PVVMVSAQEEASVMVKSREFGASGFIPKSSDLSVIQEAVRKVLDGDVFWPPQAFEAVSVSDEAKAASDGLASLTPQQFRV
LTMVCEGLLNKQIAYELSVSEATIKAHVTAIFRKLNVRTRTQAALLLQQLESIPSQ
>Mature_215_residues
ATYDILIADDHPLFRSALHQAVTMGLGPDVRMVEVASIAELETRLTEKADWDLVLLDLNMPGAFGFSGLVMLRGQYPQIP
VVMVSAQEEASVMVKSREFGASGFIPKSSDLSVIQEAVRKVLDGDVFWPPQAFEAVSVSDEAKAASDGLASLTPQQFRVL
TMVCEGLLNKQIAYELSVSEATIKAHVTAIFRKLNVRTRTQAALLLQQLESIPSQ

Specific function: Positive activator for glycerol metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=209, Percent_Identity=33.9712918660287, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1786747, Length=194, Percent_Identity=25.2577319587629, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1787473, Length=208, Percent_Identity=33.6538461538462, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788222, Length=195, Percent_Identity=23.0769230769231, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1789937, Length=155, Percent_Identity=29.6774193548387, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788712, Length=196, Percent_Identity=25.5102040816327, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23577; Mature: 23446

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYDILIADDHPLFRSALHQAVTMGLGPDVRMVEVASIAELETRLTEKADWDLVLLDLN
CCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEC
MPGAFGFSGLVMLRGQYPQIPVVMVSAQEEASVMVKSREFGASGFIPKSSDLSVIQEAVR
CCCCCCCCCEEEECCCCCCCCEEEEECCCCHHEEEECCCCCCCCCCCCCCCHHHHHHHHH
KVLDGDVFWPPQAFEAVSVSDEAKAASDGLASLTPQQFRVLTMVCEGLLNKQIAYELSVS
HHHCCCCCCCCCHHHEECCCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCHHEEEEECC
EATIKAHVTAIFRKLNVRTRTQAALLLQQLESIPSQ
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATYDILIADDHPLFRSALHQAVTMGLGPDVRMVEVASIAELETRLTEKADWDLVLLDLN
CEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEC
MPGAFGFSGLVMLRGQYPQIPVVMVSAQEEASVMVKSREFGASGFIPKSSDLSVIQEAVR
CCCCCCCCCEEEECCCCCCCCEEEEECCCCHHEEEECCCCCCCCCCCCCCCHHHHHHHHH
KVLDGDVFWPPQAFEAVSVSDEAKAASDGLASLTPQQFRVLTMVCEGLLNKQIAYELSVS
HHHCCCCCCCCCHHHEECCCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCHHEEEEECC
EATIKAHVTAIFRKLNVRTRTQAALLLQQLESIPSQ
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]