| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457393
Identifier: 77457393
GI number: 77457393
Start: 1339955
End: 1341049
Strand: Direct
Name: 77457393
Synonym: Pfl01_1166
Alternate gene names: NA
Gene position: 1339955-1341049 (Clockwise)
Preceding gene: 77457392
Following gene: 77457394
Centisome position: 20.81
GC content: 62.37
Gene sequence:
>1095_bases ATGGACTACCCAAAAAGCGTCCCCAGCGTCGGCCTGGTCGATGGCCGGTTCGTCGATGAAAACCCGGTGGCGGGAACGCC GGGTTCATTGATACCGGCGGTGTGGGGTAACAGCGTTACACAAGAAATTCTCAACGTGATTACCGGCGCCGGGCTGACAG CCGCCGAAGCCGATACCGGTCAGTTGCTCAGAGCCATTCAATCGATTGTCGGCAATGCCAGTCCTATGCGCTCAGTGGTG ACACGGCTGACGGCTTCCAAGGCGCTGACCGACCCGGAGCTGGGCCTGGTGCTGATCGATGGCGGATCCAGTGCCGTGAC GGTGACGTTGCCGCCGGCAAGCGCGGCGCTGGGTGTGCGCGATGTGATTGTTCGGCGCATGGATAACAGCGGCAACCGTC TGATCGTTCAGGCGTCAGGTTCCGACCGCATTCGTTTTCACACGCACCTGTCACCCAGCGGTTATCCGTTTCTGGTGTTG ATGGGCGGCGGGGACTGGTGGCAGTTGCGCAGCGATGCTGCGGGTAGCTGGTGGCCAGTCGGCCGGTTCGACAACACTCC ACTCGGCCGGCCGTTTTTTGAAACGACCATCCTGCTCAGTCCCGGTGGCTACGGTGCGCTCAACGGTACAGTCATGAAGC GTGCCGAGTGGCCCTGGTTGTGGGACCACGCGCAGCTATCCGGAATGTTGGGTACCGAAGCCGCTCGTGCGGGCAACGAA GGTAAATGGACGTCGGGTGACGGTGCAGCAACCTTTCGTGGCCCTGAAGGGCGTGGCGAGTTTCTGCGAGTGCTGGACGA GGGGCGGGGCGTGGATGCGGCACGTGCGATGGGTTCTTTTCAGGTGGGCTCGACGCATTCGTATGCCATGGGCGCCAATG GTGCCGGAGCGGTCGGCGCGTGGTGGTCGGACAGCCTGACGAGTTTTGGTGCCGATACTCGTGAAGAACCGCAATACGTG TCCGGGCTGTACAACGGTGGCCCGGTCTTCCCTGCCGGTACGAGTTATCAGCGGGATGCCGCCAACGCCCTGCTGCTGGC GTTCAAGTCGCGCCCTCGCAACATCGCCTATCCCGGCCGTATCAAGCTCATCTGA
Upstream 100 bases:
>100_bases TCGTGTGGGCTTTTTATTTTCAGGAACAGAAACGTCGGCGTCGTAGCAAAAGCTTGCGCGCGGCTACGTTTCATTTGTCA TTACAGAGGAACGAGCACCA
Downstream 100 bases:
>100_bases GGTGCCTATGTTCAATTATCTGTTTGACGGCTCGGGCGCCTTGTCCGGGCCTGTCGAGTTTTTTGTGACCCCGGGCATCG GTATTCAACTGCCCGGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Protein; Tail Fiber Protein; Mu-Like Phage Tail Fiber Protein; Phage Tail Collar Domain-Containing Protein; Bacteriophage Large Tail Fiber Protein; Tail Fibre Protein
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MDYPKSVPSVGLVDGRFVDENPVAGTPGSLIPAVWGNSVTQEILNVITGAGLTAAEADTGQLLRAIQSIVGNASPMRSVV TRLTASKALTDPELGLVLIDGGSSAVTVTLPPASAALGVRDVIVRRMDNSGNRLIVQASGSDRIRFHTHLSPSGYPFLVL MGGGDWWQLRSDAAGSWWPVGRFDNTPLGRPFFETTILLSPGGYGALNGTVMKRAEWPWLWDHAQLSGMLGTEAARAGNE GKWTSGDGAATFRGPEGRGEFLRVLDEGRGVDAARAMGSFQVGSTHSYAMGANGAGAVGAWWSDSLTSFGADTREEPQYV SGLYNGGPVFPAGTSYQRDAANALLLAFKSRPRNIAYPGRIKLI
Sequences:
>Translated_364_residues MDYPKSVPSVGLVDGRFVDENPVAGTPGSLIPAVWGNSVTQEILNVITGAGLTAAEADTGQLLRAIQSIVGNASPMRSVV TRLTASKALTDPELGLVLIDGGSSAVTVTLPPASAALGVRDVIVRRMDNSGNRLIVQASGSDRIRFHTHLSPSGYPFLVL MGGGDWWQLRSDAAGSWWPVGRFDNTPLGRPFFETTILLSPGGYGALNGTVMKRAEWPWLWDHAQLSGMLGTEAARAGNE GKWTSGDGAATFRGPEGRGEFLRVLDEGRGVDAARAMGSFQVGSTHSYAMGANGAGAVGAWWSDSLTSFGADTREEPQYV SGLYNGGPVFPAGTSYQRDAANALLLAFKSRPRNIAYPGRIKLI >Mature_364_residues MDYPKSVPSVGLVDGRFVDENPVAGTPGSLIPAVWGNSVTQEILNVITGAGLTAAEADTGQLLRAIQSIVGNASPMRSVV TRLTASKALTDPELGLVLIDGGSSAVTVTLPPASAALGVRDVIVRRMDNSGNRLIVQASGSDRIRFHTHLSPSGYPFLVL MGGGDWWQLRSDAAGSWWPVGRFDNTPLGRPFFETTILLSPGGYGALNGTVMKRAEWPWLWDHAQLSGMLGTEAARAGNE GKWTSGDGAATFRGPEGRGEFLRVLDEGRGVDAARAMGSFQVGSTHSYAMGANGAGAVGAWWSDSLTSFGADTREEPQYV SGLYNGGPVFPAGTSYQRDAANALLLAFKSRPRNIAYPGRIKLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38406; Mature: 38406
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYPKSVPSVGLVDGRFVDENPVAGTPGSLIPAVWGNSVTQEILNVITGAGLTAAEADTG CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCEECCCCHH QLLRAIQSIVGNASPMRSVVTRLTASKALTDPELGLVLIDGGSSAVTVTLPPASAALGVR HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHH DVIVRRMDNSGNRLIVQASGSDRIRFHTHLSPSGYPFLVLMGGGDWWQLRSDAAGSWWPV HHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCEEEEECCCCCCCCCC GRFDNTPLGRPFFETTILLSPGGYGALNGTVMKRAEWPWLWDHAQLSGMLGTEAARAGNE CCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHCCCC GKWTSGDGAATFRGPEGRGEFLRVLDEGRGVDAARAMGSFQVGSTHSYAMGANGAGAVGA CCCCCCCCCEEECCCCCCCHHHHHHHCCCCCHHHHHCCCEECCCCCCEEECCCCCCCCCC WWSDSLTSFGADTREEPQYVSGLYNGGPVFPAGTSYQRDAANALLLAFKSRPRNIAYPGR CHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCCCCCE IKLI EEEC >Mature Secondary Structure MDYPKSVPSVGLVDGRFVDENPVAGTPGSLIPAVWGNSVTQEILNVITGAGLTAAEADTG CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCEECCCCHH QLLRAIQSIVGNASPMRSVVTRLTASKALTDPELGLVLIDGGSSAVTVTLPPASAALGVR HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHH DVIVRRMDNSGNRLIVQASGSDRIRFHTHLSPSGYPFLVLMGGGDWWQLRSDAAGSWWPV HHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCEEEEECCCCCCCCCC GRFDNTPLGRPFFETTILLSPGGYGALNGTVMKRAEWPWLWDHAQLSGMLGTEAARAGNE CCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHCCCC GKWTSGDGAATFRGPEGRGEFLRVLDEGRGVDAARAMGSFQVGSTHSYAMGANGAGAVGA CCCCCCCCCEEECCCCCCCHHHHHHHCCCCCHHHHHCCCEECCCCCCEEECCCCCCCCCC WWSDSLTSFGADTREEPQYVSGLYNGGPVFPAGTSYQRDAANALLLAFKSRPRNIAYPGR CHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCCCCCE IKLI EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA