| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457378
Identifier: 77457378
GI number: 77457378
Start: 1327371
End: 1328399
Strand: Direct
Name: 77457378
Synonym: Pfl01_1151
Alternate gene names: NA
Gene position: 1327371-1328399 (Clockwise)
Preceding gene: 77457377
Following gene: 77457379
Centisome position: 20.62
GC content: 60.45
Gene sequence:
>1029_bases ATGGCACAGGGATTTACGCCGGCGATTGAAATCTACGGGGCCAACAAGGATCTGCTCAACCAGCGTCTGATCAGTTGGGA ACACATCGATGCCGCCGGGATGGAGTCCGATCAACTGACGCTGGTGCTCGATCTGGAAGGCCTTGAAGGCTTGCCGACCC TGGGCGGAACCATCGGCCTGCGGGTGGGCTATCTGGAGACCGGGCTGGTGGAAAAAGGCCAGTTCAAGGTCACTCGACTG ACGCCGACGCTGTTCCCGCTGCGCCTGACGCTGGTCGCGACCGCCGCGCCTTTCAGCGGCAAGGACGACTCCGGATTCAA GGAACGGCGCACGGCCAGTCATGGCCCTACAACCCTTGGCGGACTGTTTCGCGAGCTGGTCTCGAGACACGGATTCTCGC CGCGCGTGGATCCCGAACTGGCGCTGATCAGGATCGCCCATGTCGACCAGTCGAACGAAACCGACATGAGCTTCATCACA CGCCTGGCGAAAAAGTACGACGCGGTGGCCAAACCGTTCAACGACCTTTACGTACTGGCGAAACCGGCGCAGCTCAAAAA CCTGTCGGGCCAGGTGATACCCAACGTCATGCTGTCGGTCACCCACAACAATCGGCCGGGCGATCACGCATTCATCAGCG CCACGCTGGAAGAGACCGCCCGTACCCAGAATCAGGGTTGCAAAACCTCCTTTTGGGACAGTGCGCTCGGCAAACTGCGC GAAGTGGTCACCGGTTCCGAACCCTACAAGGTCATCCGCCAGAGACTGGCCAGCGAAGAAGAAGCCAAAGCCATCGGCGA GGCCGAAGTGCGCAAGATGCTGCGCGAGAAATACAAGCTGAAGGTCACCTGTCCGGGCGATCCGTTGCTGGCGGCCGAAG GTCTGCTGGTGCTCGACGATACCTGGCCGGATTTCATGCGCGGTCGCTGGTCGATTGAAAAAGTCACCGCCAGTGGCAAG CGCGAAGAAAGCTATCGCTGCCTGATCGAAGCCAACGGCCGGGATCCCGAGGCAAAAGCCAAGGACTGA
Upstream 100 bases:
>100_bases CGGCCCGATCCTGCCGGCAGGTGTCTGGGTGACGCTGCCGGAACTCGACTCGAAACCAGCCGTGATCAAACCGGTCCTTG CCTGGGATTAAGGAGGCTGT
Downstream 100 bases:
>100_bases TTCCCCGGTCTCACCGCCACACGCATCACTGTGGCCACTCCCACATCCTGGAACGCTCCCCATGAAGATCTCCCCGATCC TCACGCAGCTGCGTGCGCAA
Product: Phage protein D-like
Products: NA
Alternate protein names: Phage Late Control D; Phage Protein D; Phage Late Control Gene D Protein; Phage-Related Tail Protein; Late Control Gene D Protein; Fels-2 Prophage Protein; Phage Late Control D Family Protein; Phage Protein D-Like; Phage Late Control; Regulator Of Late Phage Gene Expression; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Phage Late Control Gene D Protein-Like Protein; Prophage Tail Protein; Bacteriophage Late Control D Protein; Phage Protein; Bacteriophage-Related Tail D Protein; Phage-Like Tail Protein; Regulator Of Late Gene Expression; Phage-Related Late Control Gene Protein; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Tail Protein D; Phage Regulator
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAQGFTPAIEIYGANKDLLNQRLISWEHIDAAGMESDQLTLVLDLEGLEGLPTLGGTIGLRVGYLETGLVEKGQFKVTRL TPTLFPLRLTLVATAAPFSGKDDSGFKERRTASHGPTTLGGLFRELVSRHGFSPRVDPELALIRIAHVDQSNETDMSFIT RLAKKYDAVAKPFNDLYVLAKPAQLKNLSGQVIPNVMLSVTHNNRPGDHAFISATLEETARTQNQGCKTSFWDSALGKLR EVVTGSEPYKVIRQRLASEEEAKAIGEAEVRKMLREKYKLKVTCPGDPLLAAEGLLVLDDTWPDFMRGRWSIEKVTASGK REESYRCLIEANGRDPEAKAKD
Sequences:
>Translated_342_residues MAQGFTPAIEIYGANKDLLNQRLISWEHIDAAGMESDQLTLVLDLEGLEGLPTLGGTIGLRVGYLETGLVEKGQFKVTRL TPTLFPLRLTLVATAAPFSGKDDSGFKERRTASHGPTTLGGLFRELVSRHGFSPRVDPELALIRIAHVDQSNETDMSFIT RLAKKYDAVAKPFNDLYVLAKPAQLKNLSGQVIPNVMLSVTHNNRPGDHAFISATLEETARTQNQGCKTSFWDSALGKLR EVVTGSEPYKVIRQRLASEEEAKAIGEAEVRKMLREKYKLKVTCPGDPLLAAEGLLVLDDTWPDFMRGRWSIEKVTASGK REESYRCLIEANGRDPEAKAKD >Mature_341_residues AQGFTPAIEIYGANKDLLNQRLISWEHIDAAGMESDQLTLVLDLEGLEGLPTLGGTIGLRVGYLETGLVEKGQFKVTRLT PTLFPLRLTLVATAAPFSGKDDSGFKERRTASHGPTTLGGLFRELVSRHGFSPRVDPELALIRIAHVDQSNETDMSFITR LAKKYDAVAKPFNDLYVLAKPAQLKNLSGQVIPNVMLSVTHNNRPGDHAFISATLEETARTQNQGCKTSFWDSALGKLRE VVTGSEPYKVIRQRLASEEEAKAIGEAEVRKMLREKYKLKVTCPGDPLLAAEGLLVLDDTWPDFMRGRWSIEKVTASGKR EESYRCLIEANGRDPEAKAKD
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37767; Mature: 37635
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQGFTPAIEIYGANKDLLNQRLISWEHIDAAGMESDQLTLVLDLEGLEGLPTLGGTIGL CCCCCCCEEEEEECCHHHHHHHHHCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHEE RVGYLETGLVEKGQFKVTRLTPTLFPLRLTLVATAAPFSGKDDSGFKERRTASHGPTTLG EEEEHHCCCCCCCCEEEEEECCCHHHHEEEEEEEECCCCCCCCCCHHHHHCCCCCCHHHH GLFRELVSRHGFSPRVDPELALIRIAHVDQSNETDMSFITRLAKKYDAVAKPFNDLYVLA HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE KPAQLKNLSGQVIPNVMLSVTHNNRPGDHAFISATLEETARTQNQGCKTSFWDSALGKLR CCHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHH EVVTGSEPYKVIRQRLASEEEAKAIGEAEVRKMLREKYKLKVTCPGDPLLAAEGLLVLDD HHHCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCCHHCCEEEEEC TWPDFMRGRWSIEKVTASGKREESYRCLIEANGRDPEAKAKD CCHHHHCCCCCEEHHHCCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure AQGFTPAIEIYGANKDLLNQRLISWEHIDAAGMESDQLTLVLDLEGLEGLPTLGGTIGL CCCCCCEEEEEECCHHHHHHHHHCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHEE RVGYLETGLVEKGQFKVTRLTPTLFPLRLTLVATAAPFSGKDDSGFKERRTASHGPTTLG EEEEHHCCCCCCCCEEEEEECCCHHHHEEEEEEEECCCCCCCCCCHHHHHCCCCCCHHHH GLFRELVSRHGFSPRVDPELALIRIAHVDQSNETDMSFITRLAKKYDAVAKPFNDLYVLA HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE KPAQLKNLSGQVIPNVMLSVTHNNRPGDHAFISATLEETARTQNQGCKTSFWDSALGKLR CCHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHH EVVTGSEPYKVIRQRLASEEEAKAIGEAEVRKMLREKYKLKVTCPGDPLLAAEGLLVLDD HHHCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCCHHCCEEEEEC TWPDFMRGRWSIEKVTASGKREESYRCLIEANGRDPEAKAKD CCHHHHCCCCCEEHHHCCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA