| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457375
Identifier: 77457375
GI number: 77457375
Start: 1324296
End: 1326776
Strand: Direct
Name: 77457375
Synonym: Pfl01_1148
Alternate gene names: NA
Gene position: 1324296-1326776 (Clockwise)
Preceding gene: 77457374
Following gene: 77457376
Centisome position: 20.57
GC content: 62.76
Gene sequence:
>2481_bases ATGGCAGACACATCGTTTTCGCTGATGTACGCCGCGCAAACCGCAGGCGCGGGTTCCGGTTTGTCGGCAGCGGGATCGGC CACGGACAGCCTGATCAAACCACTGTCCGAACTGAAAGAGGCGCTGCTCACGGCCAGTGTCGACATCCGCAGTCTGGTGC GTGAACAGATCAAGCTCGGCGCCGTTGTCCTGGGGCTGAACACAGCTCTGGCATCGTTCAAGGTGCCGGTTGTAACTGCC GCACCGGCGGCAGGCGGCGAGAGCAAGTCTAAGCTCAAGGCTGAGATTGAACAGCGCTCGCCTCCGGCCTACCTGCAATC GGACATGGCCCTGAAAGCCGCCATGGCCCAGCTCAGGCAGGTTCAAGGCCTGAGTGGCGACCTCGACACGCTGTCGAAAG CCAACCTCAAACTGGCCACCGATAAACGGGTTGCCGGCAGTGGGGCGACGGTCGTGGATCTGGTGCAGGTCGAAGTCGCG GCTGGCAGATCCGGGATTGGCGCTGGTCTCAAGGGCGCCGACAAGGAGCAAGTGCTGCTGGACTTTGCCCGGGATGCGGC GGTCAATGCGTCGGCGTTCGGCATCAGCCTGAAGTCGGCCGGTGAAATGCTGTCGGCCTGGCAAATCTCGATGAAACTGG ATCGCACTCAAGGTCAACTGTTGGCCGATGCGACTCAGCATCTGGGCAACAGCGGACTGAATGCGACGGCTGCCGACATC GGTTCGGTCGTGCAGCAATCCGGCGAGTCGGGCGTTGCGGCCGGCATCCTTCCCGAGCAGTTGGCGGCGTTGTCCGCCGC ATTGTTCAACGCTGATGTCGACAAGGCCGGTGCCGGGGCGGCGGTGAAAAGCATCAGCGCAGCCCTGGCCAAAGGCACCC AAGGCTCGGCGGCCGAGCAGTCGGCGTGGAAGGCGTTGGGGCTTGATCCCGGCAAGTTGACCGAAAACGTACCGGACAGC CTTGTCAAAGCGTTGGCGGCATTGAAGCAACAACCGGCAGAGCAGCAAACGGCGCTGATCAAGACACTTTTCAGTGGCGA CGATGGTGTACGCAAACTGCTGGCGAAACCCGAAGACCTGCAAAAAGCGTTTTCGCTGGTCGCGCCGGCCAAACTGGAAG GAACGTCGACGCTGGTGTCCTCGCAAGCGGCCCAGAGCAGACTGGCATCGTCATTTGCGGGTGAGGGAGGCGTGGGTCAA TGGATGGGCAAACCCGGCGAGGCACAGACGCCGCTTTCATTGCTCAAGCCCAATGATCCACTGACACCGGCTTACAGCGG CGCGATTGAACGCAGCGCCGAGCCTGCGGGCAAAGACCCGCAGCGAAGCTGGAACGCGTTCGATGCCAGTCTCAATCGTC TGATCACGGCGTTGGCGCCGGATGCGACCGGCACGTTGGACTCGCTGACGAATATGACCAATGGCGTGGCCGATATGGCC GAAGCCTATCCAAAAACCTCGACGGCGCTGGCCGTTGCGGGCGCTGGACTGTCGGCCATCGTGGTGGCGGTGATGGGCAA GGCGTTCGGCAATTTCACCGACAAACTGCTCAAGGGCGTCGCTTCAAAATTGCCGTTCGGTCTTGGCGGTTTGATTGCCG ATCTTGAAGACCCCAAAGCAAAGGACAAGTCTGCCAGGAATGGCGCGGATCATGACTGCTGCTGCAAACCGTTGGGCAGC GGGAGCGGGACGGCTAACACACTCGAGCCACGCTGGCCAGGCATCCGGCGGCGAGCCGGACGTGAGCCCACCGGCCGAAG CGTGCGAAGTCTACGCAGGGTGACGCCTTGGCCACCACGGACCAGCGCACCACCAGCGGTGCTGGCACGGCCCGTTCTGC CTTCCATGTCCGGCTCACCCTGGCCGGGAAGCATGACGGCATTTTCCGGCTCGTCGGCCGTCAGTGCTGCACCGGCCGCT CCGCTGTCCGGTGCTTACGCTAGGGCAGGCAAGTTGCTCGCCAAGCGAGCGCCGCCGCTGCGATTGCTCAGCGCCGGGTA TGAAATGGTGACCGGCGTCATGAAGGGCGATACGCGTTCCGTCGTGTCGTCCGGTGCATCGTTAGCCGGGTCGTCTGCCG GAGCCGCTGTCGGTGCTGCACTGGGCACGTTGATTCTGCCGGGTTTGGGCACCATGGTCGGCGGGTGGCTCGGAAGCATG GCGGGGGGAGCCATCGGTGAGTCCCTGGGCGACAAGCTCGGGACACAAGTCGATCGTCTTGGCTCTCCTGCACAGGTCAG TAAAGATCTGATCGCGACCTCGGCGACCTTCACGATTCCCGCGACACCTGCCACCGCAACTGCCAGCCAGCCTGTCACGT TCAACTCCACCATTAACATCAATGGTCAGGATCAGGGCAGCGCCCAGGCACTGGCCAATCTGGTGGTGCAGACAACGATG AGTCAATTGGGCCAGATCATGCCGACCAACCCCCTCGCCACACGACGTGACGCAGCCCTGACCGATGGAGTCGCCACATG A
Upstream 100 bases:
>100_bases GGTAAGTGAGGCGGAAATTCTGGAGTGGGACGCCGAAAAGGCGTTGCGCCGCTACGACATAGCGATCACTCGCCTTGGCG TGAAAAAGGAGTAGAGCGGC
Downstream 100 bases:
>100_bases AACAACAAATGGCACTGGGCAGTTTCATCTTCGGCCTGTCCCGCGGCTTTGCCTACAGCACATTGCTGCGCAAATCCGAT GGCGGCTGGACGGAACTGCC
Product: Phage tail tape measure protein TP901, core region
Products: NA
Alternate protein names: Phage Tail Tape Measure Protein; Phage Tail Tape Measure Core Region; Tail Protein
Number of amino acids: Translated: 826; Mature: 825
Protein sequence:
>826_residues MADTSFSLMYAAQTAGAGSGLSAAGSATDSLIKPLSELKEALLTASVDIRSLVREQIKLGAVVLGLNTALASFKVPVVTA APAAGGESKSKLKAEIEQRSPPAYLQSDMALKAAMAQLRQVQGLSGDLDTLSKANLKLATDKRVAGSGATVVDLVQVEVA AGRSGIGAGLKGADKEQVLLDFARDAAVNASAFGISLKSAGEMLSAWQISMKLDRTQGQLLADATQHLGNSGLNATAADI GSVVQQSGESGVAAGILPEQLAALSAALFNADVDKAGAGAAVKSISAALAKGTQGSAAEQSAWKALGLDPGKLTENVPDS LVKALAALKQQPAEQQTALIKTLFSGDDGVRKLLAKPEDLQKAFSLVAPAKLEGTSTLVSSQAAQSRLASSFAGEGGVGQ WMGKPGEAQTPLSLLKPNDPLTPAYSGAIERSAEPAGKDPQRSWNAFDASLNRLITALAPDATGTLDSLTNMTNGVADMA EAYPKTSTALAVAGAGLSAIVVAVMGKAFGNFTDKLLKGVASKLPFGLGGLIADLEDPKAKDKSARNGADHDCCCKPLGS GSGTANTLEPRWPGIRRRAGREPTGRSVRSLRRVTPWPPRTSAPPAVLARPVLPSMSGSPWPGSMTAFSGSSAVSAAPAA PLSGAYARAGKLLAKRAPPLRLLSAGYEMVTGVMKGDTRSVVSSGASLAGSSAGAAVGAALGTLILPGLGTMVGGWLGSM AGGAIGESLGDKLGTQVDRLGSPAQVSKDLIATSATFTIPATPATATASQPVTFNSTININGQDQGSAQALANLVVQTTM SQLGQIMPTNPLATRRDAALTDGVAT
Sequences:
>Translated_826_residues MADTSFSLMYAAQTAGAGSGLSAAGSATDSLIKPLSELKEALLTASVDIRSLVREQIKLGAVVLGLNTALASFKVPVVTA APAAGGESKSKLKAEIEQRSPPAYLQSDMALKAAMAQLRQVQGLSGDLDTLSKANLKLATDKRVAGSGATVVDLVQVEVA AGRSGIGAGLKGADKEQVLLDFARDAAVNASAFGISLKSAGEMLSAWQISMKLDRTQGQLLADATQHLGNSGLNATAADI GSVVQQSGESGVAAGILPEQLAALSAALFNADVDKAGAGAAVKSISAALAKGTQGSAAEQSAWKALGLDPGKLTENVPDS LVKALAALKQQPAEQQTALIKTLFSGDDGVRKLLAKPEDLQKAFSLVAPAKLEGTSTLVSSQAAQSRLASSFAGEGGVGQ WMGKPGEAQTPLSLLKPNDPLTPAYSGAIERSAEPAGKDPQRSWNAFDASLNRLITALAPDATGTLDSLTNMTNGVADMA EAYPKTSTALAVAGAGLSAIVVAVMGKAFGNFTDKLLKGVASKLPFGLGGLIADLEDPKAKDKSARNGADHDCCCKPLGS GSGTANTLEPRWPGIRRRAGREPTGRSVRSLRRVTPWPPRTSAPPAVLARPVLPSMSGSPWPGSMTAFSGSSAVSAAPAA PLSGAYARAGKLLAKRAPPLRLLSAGYEMVTGVMKGDTRSVVSSGASLAGSSAGAAVGAALGTLILPGLGTMVGGWLGSM AGGAIGESLGDKLGTQVDRLGSPAQVSKDLIATSATFTIPATPATATASQPVTFNSTININGQDQGSAQALANLVVQTTM SQLGQIMPTNPLATRRDAALTDGVAT >Mature_825_residues ADTSFSLMYAAQTAGAGSGLSAAGSATDSLIKPLSELKEALLTASVDIRSLVREQIKLGAVVLGLNTALASFKVPVVTAA PAAGGESKSKLKAEIEQRSPPAYLQSDMALKAAMAQLRQVQGLSGDLDTLSKANLKLATDKRVAGSGATVVDLVQVEVAA GRSGIGAGLKGADKEQVLLDFARDAAVNASAFGISLKSAGEMLSAWQISMKLDRTQGQLLADATQHLGNSGLNATAADIG SVVQQSGESGVAAGILPEQLAALSAALFNADVDKAGAGAAVKSISAALAKGTQGSAAEQSAWKALGLDPGKLTENVPDSL VKALAALKQQPAEQQTALIKTLFSGDDGVRKLLAKPEDLQKAFSLVAPAKLEGTSTLVSSQAAQSRLASSFAGEGGVGQW MGKPGEAQTPLSLLKPNDPLTPAYSGAIERSAEPAGKDPQRSWNAFDASLNRLITALAPDATGTLDSLTNMTNGVADMAE AYPKTSTALAVAGAGLSAIVVAVMGKAFGNFTDKLLKGVASKLPFGLGGLIADLEDPKAKDKSARNGADHDCCCKPLGSG SGTANTLEPRWPGIRRRAGREPTGRSVRSLRRVTPWPPRTSAPPAVLARPVLPSMSGSPWPGSMTAFSGSSAVSAAPAAP LSGAYARAGKLLAKRAPPLRLLSAGYEMVTGVMKGDTRSVVSSGASLAGSSAGAAVGAALGTLILPGLGTMVGGWLGSMA GGAIGESLGDKLGTQVDRLGSPAQVSKDLIATSATFTIPATPATATASQPVTFNSTININGQDQGSAQALANLVVQTTMS QLGQIMPTNPLATRRDAALTDGVAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83351; Mature: 83219
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTSFSLMYAAQTAGAGSGLSAAGSATDSLIKPLSELKEALLTASVDIRSLVREQIKLG CCCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVLGLNTALASFKVPVVTAAPAAGGESKSKLKAEIEQRSPPAYLQSDMALKAAMAQLRQ HHEEEHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VQGLSGDLDTLSKANLKLATDKRVAGSGATVVDLVQVEVAAGRSGIGAGLKGADKEQVLL HCCCCCCHHHHHHCCEEEECCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHH DFARDAAVNASAFGISLKSAGEMLSAWQISMKLDRTQGQLLADATQHLGNSGLNATAADI HHHHHHHCCCHHHCEEHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCCCHHHHHH GSVVQQSGESGVAAGILPEQLAALSAALFNADVDKAGAGAAVKSISAALAKGTQGSAAEQ HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHH SAWKALGLDPGKLTENVPDSLVKALAALKQQPAEQQTALIKTLFSGDDGVRKLLAKPEDL HHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCHHH QKAFSLVAPAKLEGTSTLVSSQAAQSRLASSFAGEGGVGQWMGKPGEAQTPLSLLKPNDP HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCC LTPAYSGAIERSAEPAGKDPQRSWNAFDASLNRLITALAPDATGTLDSLTNMTNGVADMA CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EAYPKTSTALAVAGAGLSAIVVAVMGKAFGNFTDKLLKGVASKLPFGLGGLIADLEDPKA HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC KDKSARNGADHDCCCKPLGSGSGTANTLEPRWPGIRRRAGREPTGRSVRSLRRVTPWPPR CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCC TSAPPAVLARPVLPSMSGSPWPGSMTAFSGSSAVSAAPAAPLSGAYARAGKLLAKRAPPL CCCCHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH RLLSAGYEMVTGVMKGDTRSVVSSGASLAGSSAGAAVGAALGTLILPGLGTMVGGWLGSM HHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGAIGESLGDKLGTQVDRLGSPAQVSKDLIATSATFTIPATPATATASQPVTFNSTINI HCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEECCEEEE NGQDQGSAQALANLVVQTTMSQLGQIMPTNPLATRRDAALTDGVAT CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure ADTSFSLMYAAQTAGAGSGLSAAGSATDSLIKPLSELKEALLTASVDIRSLVREQIKLG CCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVLGLNTALASFKVPVVTAAPAAGGESKSKLKAEIEQRSPPAYLQSDMALKAAMAQLRQ HHEEEHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VQGLSGDLDTLSKANLKLATDKRVAGSGATVVDLVQVEVAAGRSGIGAGLKGADKEQVLL HCCCCCCHHHHHHCCEEEECCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHH DFARDAAVNASAFGISLKSAGEMLSAWQISMKLDRTQGQLLADATQHLGNSGLNATAADI HHHHHHHCCCHHHCEEHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCCCHHHHHH GSVVQQSGESGVAAGILPEQLAALSAALFNADVDKAGAGAAVKSISAALAKGTQGSAAEQ HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHH SAWKALGLDPGKLTENVPDSLVKALAALKQQPAEQQTALIKTLFSGDDGVRKLLAKPEDL HHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCHHH QKAFSLVAPAKLEGTSTLVSSQAAQSRLASSFAGEGGVGQWMGKPGEAQTPLSLLKPNDP HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCC LTPAYSGAIERSAEPAGKDPQRSWNAFDASLNRLITALAPDATGTLDSLTNMTNGVADMA CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EAYPKTSTALAVAGAGLSAIVVAVMGKAFGNFTDKLLKGVASKLPFGLGGLIADLEDPKA HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC KDKSARNGADHDCCCKPLGSGSGTANTLEPRWPGIRRRAGREPTGRSVRSLRRVTPWPPR CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCC TSAPPAVLARPVLPSMSGSPWPGSMTAFSGSSAVSAAPAAPLSGAYARAGKLLAKRAPPL CCCCHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH RLLSAGYEMVTGVMKGDTRSVVSSGASLAGSSAGAAVGAALGTLILPGLGTMVGGWLGSM HHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGAIGESLGDKLGTQVDRLGSPAQVSKDLIATSATFTIPATPATATASQPVTFNSTINI HCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEECCEEEE NGQDQGSAQALANLVVQTTMSQLGQIMPTNPLATRRDAALTDGVAT CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA