| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457365
Identifier: 77457365
GI number: 77457365
Start: 1315433
End: 1315954
Strand: Direct
Name: 77457365
Synonym: Pfl01_1138
Alternate gene names: NA
Gene position: 1315433-1315954 (Clockwise)
Preceding gene: 77457364
Following gene: 77457366
Centisome position: 20.43
GC content: 63.41
Gene sequence:
>522_bases ATGCCCACACCGATCCAGCAGCCGTCGCAACTGTTCACCGCCATCGCGACGACACTGCGCAACACCGCCGGACTCGACCT CAAGGTCGGCAGCCGCGGGGATTTTGATGCGCCGGGCGAGCAGGCCTGGGTGCTGATCGACATCGAGCGAAATGCACCGG GAGAGCGTGCCGCCAATGGGCGCATCGCTCATGTGCTGACGCTGTCGCTGCAAGTTATTCCGGCGCTGTCCGCCACGGCG TTTGCCGCCTGTGACCTGATCGCGGCGCTGAAAAACCGGGTCACCGACAACCGCTGGGGCTTGCCCGGCGATCAATGCGA TCTGCCGATGAACATCGATGGCTTGCCGTCATTGCTCATCCGCGCCGACCAGCCGAACAAAGCCTGGACGCTGTCGTTCA ACCAGACGCTCTACCTGGGCCCGACCCTGTTGGACGATCCGTTGGGTACACCGAAATTCGCCCGCACCTGGGAAGTCAGC GACATCGACGATCCGGATCAGTACACCACGCTGGAGGCCTGA
Upstream 100 bases:
>100_bases TGCGAAGTCCCGCCACGCGACCAGCCTTGAATTTCAATTTTCCCCATGCCGCCATTTCGGCGGCAGGGCTTCGCGTGGAC GAATGAAAAGGAGGTCATCT
Downstream 100 bases:
>100_bases CCGATGTTCGACGCGTTACTGCGAATGCAACTGGGCCCGATCATCGAGCGACTGGCGGAAATGGAAGCGGAGATTGAAGA CCTGCACCGGCGTGCCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MPTPIQQPSQLFTAIATTLRNTAGLDLKVGSRGDFDAPGEQAWVLIDIERNAPGERAANGRIAHVLTLSLQVIPALSATA FAACDLIAALKNRVTDNRWGLPGDQCDLPMNIDGLPSLLIRADQPNKAWTLSFNQTLYLGPTLLDDPLGTPKFARTWEVS DIDDPDQYTTLEA
Sequences:
>Translated_173_residues MPTPIQQPSQLFTAIATTLRNTAGLDLKVGSRGDFDAPGEQAWVLIDIERNAPGERAANGRIAHVLTLSLQVIPALSATA FAACDLIAALKNRVTDNRWGLPGDQCDLPMNIDGLPSLLIRADQPNKAWTLSFNQTLYLGPTLLDDPLGTPKFARTWEVS DIDDPDQYTTLEA >Mature_172_residues PTPIQQPSQLFTAIATTLRNTAGLDLKVGSRGDFDAPGEQAWVLIDIERNAPGERAANGRIAHVLTLSLQVIPALSATAF AACDLIAALKNRVTDNRWGLPGDQCDLPMNIDGLPSLLIRADQPNKAWTLSFNQTLYLGPTLLDDPLGTPKFARTWEVSD IDDPDQYTTLEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18766; Mature: 18635
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPIQQPSQLFTAIATTLRNTAGLDLKVGSRGDFDAPGEQAWVLIDIERNAPGERAANG CCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCC RIAHVLTLSLQVIPALSATAFAACDLIAALKNRVTDNRWGLPGDQCDLPMNIDGLPSLLI EEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE RADQPNKAWTLSFNQTLYLGPTLLDDPLGTPKFARTWEVSDIDDPDQYTTLEA ECCCCCCEEEEEECCEEEECCEECCCCCCCCCCCEEEECCCCCCCCCEEEECC >Mature Secondary Structure PTPIQQPSQLFTAIATTLRNTAGLDLKVGSRGDFDAPGEQAWVLIDIERNAPGERAANG CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCC RIAHVLTLSLQVIPALSATAFAACDLIAALKNRVTDNRWGLPGDQCDLPMNIDGLPSLLI EEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE RADQPNKAWTLSFNQTLYLGPTLLDDPLGTPKFARTWEVSDIDDPDQYTTLEA ECCCCCCEEEEEECCEEEECCEECCCCCCCCCCCEEEECCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA