| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yeaZ [H]
Identifier: 77457298
GI number: 77457298
Start: 1240713
End: 1241387
Strand: Direct
Name: yeaZ [H]
Synonym: Pfl01_1071
Alternate gene names: 77457298
Gene position: 1240713-1241387 (Clockwise)
Preceding gene: 77457297
Following gene: 77457299
Centisome position: 19.27
GC content: 66.52
Gene sequence:
>675_bases ATGAGCACCTTGCTGGCCCTGGACACCGCGACTGAAGCTTGCTCCGTTGCCTTGCTGCATGACGGCAAGGTCACGAGCCA TTACGAGGTGATCCCGCGCCTGCATGCGCAGAAACTGCTGCCGATGATCCAGCAACTGCTGGCCGATGCCGGCACCACCC TGCAAGCGGTGGATGCCATCGCCTTCGGCCGTGGCCCGGGCGCTTTCACCGGCGTGCGGATTGCCATTGGCGTGGTGCAA GGCCTGGCGTTTGCGCTGGATCGCCCGGTGTTGCCGGTGTCGAACCTGGCCGTGCTGGCACAGCGGGCTTATCGCGAGCA CGGCGTGAGCCAGGTCGCGGCCGCCATCGATGCGCGCATGGATGAGGTGTATTGGGGCTGCTACCGCGAGACGGCCGGGG AGATGCGTCTGGTCGGCGCCGAGGCGGTGCTGCCGCCGGAAGTCGCCGCGCTGCCGGACGATGCTTCCGGTGACTGGTTC GGTGCCGGCACTGGCTGGGGTTATGGCGAACGCATCGCTGTAAACCTGAGCGGGTCCGATGCGGGCATGCTGCCCCACGC CGAAGACCTGCTGACCCTGGCGCGATTTGCTTGGGAGCGCGGTGAAGCGATTCCGGCAGATGATGCCCAGCCGGTTTACC TGCGCGACAAAGTGGCCACCCCGAAAGCACGCTGA
Upstream 100 bases:
>100_bases AGCTGAAAAACCTGATCCGCTGCATCATCCACGGCCCGCTTGCGGGCCGTAGTTGTTTATACTGGCGCACTTTTTCCCCA CCTGATTTACGGACACATCG
Downstream 100 bases:
>100_bases GGCTATTCACCCTGTGGCATTCGCCGCAGGGTTCTCCCTGTTCCTGCCAATCGTCCGTTTCTAACCCCGCGCTTTAAACC TTTTGTCTTTTATGTGTTCT
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLADAGTTLQAVDAIAFGRGPGAFTGVRIAIGVVQ GLAFALDRPVLPVSNLAVLAQRAYREHGVSQVAAAIDARMDEVYWGCYRETAGEMRLVGAEAVLPPEVAALPDDASGDWF GAGTGWGYGERIAVNLSGSDAGMLPHAEDLLTLARFAWERGEAIPADDAQPVYLRDKVATPKAR
Sequences:
>Translated_224_residues MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLADAGTTLQAVDAIAFGRGPGAFTGVRIAIGVVQ GLAFALDRPVLPVSNLAVLAQRAYREHGVSQVAAAIDARMDEVYWGCYRETAGEMRLVGAEAVLPPEVAALPDDASGDWF GAGTGWGYGERIAVNLSGSDAGMLPHAEDLLTLARFAWERGEAIPADDAQPVYLRDKVATPKAR >Mature_223_residues STLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLADAGTTLQAVDAIAFGRGPGAFTGVRIAIGVVQG LAFALDRPVLPVSNLAVLAQRAYREHGVSQVAAAIDARMDEVYWGCYRETAGEMRLVGAEAVLPPEVAALPDDASGDWFG AGTGWGYGERIAVNLSGSDAGMLPHAEDLLTLARFAWERGEAIPADDAQPVYLRDKVATPKAR
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=225, Percent_Identity=46.6666666666667, Blast_Score=196, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 23745; Mature: 23614
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLADAGTTLQAVDAI CCCEEEECCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AFGRGPGAFTGVRIAIGVVQGLAFALDRPVLPVSNLAVLAQRAYREHGVSQVAAAIDARM HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEVYWGCYRETAGEMRLVGAEAVLPPEVAALPDDASGDWFGAGTGWGYGERIAVNLSGSD HHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCEEEEEECCCC AGMLPHAEDLLTLARFAWERGEAIPADDAQPVYLRDKVATPKAR CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure STLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLADAGTTLQAVDAI CCEEEECCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AFGRGPGAFTGVRIAIGVVQGLAFALDRPVLPVSNLAVLAQRAYREHGVSQVAAAIDARM HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEVYWGCYRETAGEMRLVGAEAVLPPEVAALPDDASGDWFGAGTGWGYGERIAVNLSGSD HHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCEEEEEECCCC AGMLPHAEDLLTLARFAWERGEAIPADDAQPVYLRDKVATPKAR CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]