| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ppc [H]
Identifier: 77457296
GI number: 77457296
Start: 1237049
End: 1239679
Strand: Direct
Name: ppc [H]
Synonym: Pfl01_1069
Alternate gene names: 77457296
Gene position: 1237049-1239679 (Clockwise)
Preceding gene: 77457292
Following gene: 77457297
Centisome position: 19.21
GC content: 64.96
Gene sequence:
>2631_bases ATGACCGATATTGATGCACGCTTGCGCGAAGACGTTCACCTGCTCGGTGAGCTGTTGGGCAACACCATTCGTGACCAGTA CGGCGAGGCGTTTCTCGACAAGATCGAGCAGATCCGCAAAGGCGCCAAGGCCGACCGGCGTGGCTCGATGGACGCCGAAC TCAGCGCCAGCCTCAATCAATTGAGCGAAGACGAACTGCTGCCGGTGGCGCGGGCCTTCAACCAGTTTCTCAACCTGGCG AACATCGCTGAGCAATACCAGCTCATCCATCGCCGCGAAGAGACCCAGGCTGCGCCGTTCGAGTCCCGCGTACTGCCGGA ACTGCTCGCCCGCTTGCGCAACGAAGGGCACAGCGCCGAATCCCTGGCGCGGCAACTGGCGCGGCTGGAAATCGAACTGG TGCTCACCGCGCACCCGACCGAAGTGGCCCGGCGCACGCTGATCCAGAAGTACGACGCGATCGCCGCGCAACTGGCGGCT CAGGATCACCGTGACCTGACCACGGCCGAGCGCGAGCAGATCCACAACACCCTGCAACGCCTGATCGCCGAGGCCTGGCA CACCGAAGAAATCCGCCGCACCCGGCCGACTCCAGTGGACGAAGCCAAGTGGGGTTTTGCGGTGATCGAACACTCGCTGT GGCAGGCGATTCCCCACCATATGCGCAAGGCCGATCAGGCGCTGTTTGCGGCCACCGGTTTGCGTTTGCCACTGGAAGCC GCGCCGATCCGCTTCGCTTCGTGGATGGGTGGCGACCGTGACGGCAACCCGAACGTGACCGCTGCCGTGACCCGCGAAGT GTTGTTGCTGGCGCGCTGGATGGCGGCGGATCTGTACCTGCGCGACGTCGATCACCTGGCCGCCGAACTGTCGATGCAGC AGGCCAGCGACGCGCTCAAGGCCCGGGCCGGCGACAGTGCCGAGCCGTATCGGGCGGTGCTCAAGCAATTGCGTGAACGG CTGCGCGCCACGCGCAACTGGGCCCATGCATCTTTGACGGCGACCACGCCGGCGCCTGCCGATGTGCTGCACAACAACCG CGACCTGCTCGATCCGCTGGAGCTGTGTTTCAACTCGCTGCACGAATGCGGCATGGGTGTGATTGCCGACGGGCCGTTGC TCGATTGCCTGCGCCGGGCCGTGACCTTCGGCCTGTTCCTGGTGCGCCTCGATGTACGTCAGGATTCGTCCCGTCACAGC GCGGCCATGACCGAAATCACCGATTACCTCGGCCTCGGCAAATACGAGGAGTGGGACGAAGAACAGCGCATCAGCTTCCT CACTCGCGAGCTGCAAAACCGTCGGCCGTTGCTGCCGGCGCATTTCAAACCTTCGGCCGACACCGCCGAAGTGCTCGCCA CCTGCAAGGAAATCGCCGCCGCGCCGGGCGCTTCGCTGGGCTCCTACGTGATCTCCATGGCCGGTGCCGCTTCCGATGTG CTGGCGGTGCAATTGCTGCTCAAGGAATCCGGCGTACTGCGGCCGATGCGCGTGGTGCCGCTGTTCGAAACCCTCGCCGA CCTGGATAACGCCGGCCCGGTGATCGAGCGCCTGTTGCTGCTGCCGGGTTACCGTGCGCGGCTGCAAGGCCCGCAGGAAG TGATGATCGGCTATTCCGATTCGGCCAAGGACGCCGGCACCACTGCGGCGGCCTGGGCGCAGTACCGGGCGCAGGAGCGG CTGGTGGAAATTTGCCGCGAGCAGCAAGTCGAACTGCTGCTGTTTCACGGTCGCGGTGGCACCGTGGGCCGTGGCGGCGG CCCGGCGCACGCGGCGATTCTGTCGCAGCCGCCGGGTTCGGTGGCCGGACGTTTCCGCACCACCGAGCAGGGGGAAATGA TTAGATTCAAATTCGGCCTGCCGGACATCGCCGAGCAAAACCTCAATCTGTATCTGGCGGCGGTGCTCGAAGCGACCCTG TTGCCACCGCCACCACCGACGCCTGAATGGCGGCATTTGATGGACGAACTGGCCGCTGACGGTGTCGCCGCCTACCGCGC GGTGGTGCGGGAGAATCCACAGTTCGTCGAGTATTTCCGCCAGTCGACCCCGGAGCAGGAGTTGGGGCGTTTGCCATTGG GCAGTCGTCCGGCCAAGCGCCGTGCCGGTGGCATCGAGAGCCTGCGGGCGATTCCGTGGATCTTCGGCTGGACCCAGACT CGCCTGATGCTGCCGGCCTGGCTTGGCTGGGAAACCGCGTTGAGCAAGGCGCTGGAGCGCGGCGAAGGCGAATTGCTCGG GCAGATGCGTGAGCAGTGGCCGTTCTTCCGCACGCGCATCGACATGCTGGAAATGGTGCTGGCCAAAGCCGACGCCGACA TTGCGCTGTCCTACGACGAACGATTGGTGGAGCCGGACTTGCTACCTTTGGGTGCGCACTTGCGCGACCTATTGTCGCAG GCGTGTTCCGTCGTCCTCGGCCTGACCGGCCAGTCGCAGCTACTGGCACATAGCCCGGACACCCTGGAATTCATCCGCCT GCGCAACACCTACCTCGACCCGCTGCATCTATTGCAGGCCGAGTTGCTGGCGCGTTCGCGGCGACAGAATGTCGAGCAGG GCAGCCCGGTGGAACAGGCGCTGCTGGTGTCTGTGGCGGGGATTGCCGCCGGTTTGCGAAATACCGGCTAA
Upstream 100 bases:
>100_bases AGTCCCTTCGTCGTCTGCTTGTAAGAAGCGTCCCAGAGCGGCACTCTCTGTTCATCCACTCACTTGCGATCCGTCACCGA TTACTGCTGGAGAGATGCTG
Downstream 100 bases:
>100_bases GGTTTTCTGCGTGGGGCGGGGCACCCGGGGCGAACCTCGGGTGCCGTTTATCGACCGTGGGAAAAATGCGGTCAGGCGAC AGTTAATGATGGGGTTGCGA
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 876; Mature: 875
Protein sequence:
>876_residues MTDIDARLREDVHLLGELLGNTIRDQYGEAFLDKIEQIRKGAKADRRGSMDAELSASLNQLSEDELLPVARAFNQFLNLA NIAEQYQLIHRREETQAAPFESRVLPELLARLRNEGHSAESLARQLARLEIELVLTAHPTEVARRTLIQKYDAIAAQLAA QDHRDLTTAEREQIHNTLQRLIAEAWHTEEIRRTRPTPVDEAKWGFAVIEHSLWQAIPHHMRKADQALFAATGLRLPLEA APIRFASWMGGDRDGNPNVTAAVTREVLLLARWMAADLYLRDVDHLAAELSMQQASDALKARAGDSAEPYRAVLKQLRER LRATRNWAHASLTATTPAPADVLHNNRDLLDPLELCFNSLHECGMGVIADGPLLDCLRRAVTFGLFLVRLDVRQDSSRHS AAMTEITDYLGLGKYEEWDEEQRISFLTRELQNRRPLLPAHFKPSADTAEVLATCKEIAAAPGASLGSYVISMAGAASDV LAVQLLLKESGVLRPMRVVPLFETLADLDNAGPVIERLLLLPGYRARLQGPQEVMIGYSDSAKDAGTTAAAWAQYRAQER LVEICREQQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPDIAEQNLNLYLAAVLEATL LPPPPPTPEWRHLMDELAADGVAAYRAVVRENPQFVEYFRQSTPEQELGRLPLGSRPAKRRAGGIESLRAIPWIFGWTQT RLMLPAWLGWETALSKALERGEGELLGQMREQWPFFRTRIDMLEMVLAKADADIALSYDERLVEPDLLPLGAHLRDLLSQ ACSVVLGLTGQSQLLAHSPDTLEFIRLRNTYLDPLHLLQAELLARSRRQNVEQGSPVEQALLVSVAGIAAGLRNTG
Sequences:
>Translated_876_residues MTDIDARLREDVHLLGELLGNTIRDQYGEAFLDKIEQIRKGAKADRRGSMDAELSASLNQLSEDELLPVARAFNQFLNLA NIAEQYQLIHRREETQAAPFESRVLPELLARLRNEGHSAESLARQLARLEIELVLTAHPTEVARRTLIQKYDAIAAQLAA QDHRDLTTAEREQIHNTLQRLIAEAWHTEEIRRTRPTPVDEAKWGFAVIEHSLWQAIPHHMRKADQALFAATGLRLPLEA APIRFASWMGGDRDGNPNVTAAVTREVLLLARWMAADLYLRDVDHLAAELSMQQASDALKARAGDSAEPYRAVLKQLRER LRATRNWAHASLTATTPAPADVLHNNRDLLDPLELCFNSLHECGMGVIADGPLLDCLRRAVTFGLFLVRLDVRQDSSRHS AAMTEITDYLGLGKYEEWDEEQRISFLTRELQNRRPLLPAHFKPSADTAEVLATCKEIAAAPGASLGSYVISMAGAASDV LAVQLLLKESGVLRPMRVVPLFETLADLDNAGPVIERLLLLPGYRARLQGPQEVMIGYSDSAKDAGTTAAAWAQYRAQER LVEICREQQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPDIAEQNLNLYLAAVLEATL LPPPPPTPEWRHLMDELAADGVAAYRAVVRENPQFVEYFRQSTPEQELGRLPLGSRPAKRRAGGIESLRAIPWIFGWTQT RLMLPAWLGWETALSKALERGEGELLGQMREQWPFFRTRIDMLEMVLAKADADIALSYDERLVEPDLLPLGAHLRDLLSQ ACSVVLGLTGQSQLLAHSPDTLEFIRLRNTYLDPLHLLQAELLARSRRQNVEQGSPVEQALLVSVAGIAAGLRNTG >Mature_875_residues TDIDARLREDVHLLGELLGNTIRDQYGEAFLDKIEQIRKGAKADRRGSMDAELSASLNQLSEDELLPVARAFNQFLNLAN IAEQYQLIHRREETQAAPFESRVLPELLARLRNEGHSAESLARQLARLEIELVLTAHPTEVARRTLIQKYDAIAAQLAAQ DHRDLTTAEREQIHNTLQRLIAEAWHTEEIRRTRPTPVDEAKWGFAVIEHSLWQAIPHHMRKADQALFAATGLRLPLEAA PIRFASWMGGDRDGNPNVTAAVTREVLLLARWMAADLYLRDVDHLAAELSMQQASDALKARAGDSAEPYRAVLKQLRERL RATRNWAHASLTATTPAPADVLHNNRDLLDPLELCFNSLHECGMGVIADGPLLDCLRRAVTFGLFLVRLDVRQDSSRHSA AMTEITDYLGLGKYEEWDEEQRISFLTRELQNRRPLLPAHFKPSADTAEVLATCKEIAAAPGASLGSYVISMAGAASDVL AVQLLLKESGVLRPMRVVPLFETLADLDNAGPVIERLLLLPGYRARLQGPQEVMIGYSDSAKDAGTTAAAWAQYRAQERL VEICREQQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPDIAEQNLNLYLAAVLEATLL PPPPPTPEWRHLMDELAADGVAAYRAVVRENPQFVEYFRQSTPEQELGRLPLGSRPAKRRAGGIESLRAIPWIFGWTQTR LMLPAWLGWETALSKALERGEGELLGQMREQWPFFRTRIDMLEMVLAKADADIALSYDERLVEPDLLPLGAHLRDLLSQA CSVVLGLTGQSQLLAHSPDTLEFIRLRNTYLDPLHLLQAELLARSRRQNVEQGSPVEQALLVSVAGIAAGLRNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=887, Percent_Identity=55.467869222097, Blast_Score=939, Evalue=0.0,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 97376; Mature: 97245
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIDARLREDVHLLGELLGNTIRDQYGEAFLDKIEQIRKGAKADRRGSMDAELSASLNQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LSEDELLPVARAFNQFLNLANIAEQYQLIHRREETQAAPFESRVLPELLARLRNEGHSAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH SLARQLARLEIELVLTAHPTEVARRTLIQKYDAIAAQLAAQDHRDLTTAEREQIHNTLQR HHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LIAEAWHTEEIRRTRPTPVDEAKWGFAVIEHSLWQAIPHHMRKADQALFAATGLRLPLEA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH APIRFASWMGGDRDGNPNVTAAVTREVLLLARWMAADLYLRDVDHLAAELSMQQASDALK CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAGDSAEPYRAVLKQLRERLRATRNWAHASLTATTPAPADVLHNNRDLLDPLELCFNSL HCCCCCCCHHHHHHHHHHHHHHHHHCHHHCEEEECCCCCHHHHCCCCCCCCHHHHHHHHH HECGMGVIADGPLLDCLRRAVTFGLFLVRLDVRQDSSRHSAAMTEITDYLGLGKYEEWDE HHCCCCEECCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCH EQRISFLTRELQNRRPLLPAHFKPSADTAEVLATCKEIAAAPGASLGSYVISMAGAASDV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH LAVQLLLKESGVLRPMRVVPLFETLADLDNAGPVIERLLLLPGYRARLQGPQEVMIGYSD HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHCCCCHHHEEECCC SAKDAGTTAAAWAQYRAQERLVEICREQQVELLLFHGRGGTVGRGGGPAHAAILSQPPGS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCH VAGRFRTTEQGEMIRFKFGLPDIAEQNLNLYLAAVLEATLLPPPPPTPEWRHLMDELAAD HCCCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GVAAYRAVVRENPQFVEYFRQSTPEQELGRLPLGSRPAKRRAGGIESLRAIPWIFGWTQT HHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHH RLMLPAWLGWETALSKALERGEGELLGQMREQWPFFRTRIDMLEMVLAKADADIALSYDE HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEECCHH RLVEPDLLPLGAHLRDLLSQACSVVLGLTGQSQLLAHSPDTLEFIRLRNTYLDPLHLLQA HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHH ELLARSRRQNVEQGSPVEQALLVSVAGIAAGLRNTG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDIDARLREDVHLLGELLGNTIRDQYGEAFLDKIEQIRKGAKADRRGSMDAELSASLNQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LSEDELLPVARAFNQFLNLANIAEQYQLIHRREETQAAPFESRVLPELLARLRNEGHSAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH SLARQLARLEIELVLTAHPTEVARRTLIQKYDAIAAQLAAQDHRDLTTAEREQIHNTLQR HHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LIAEAWHTEEIRRTRPTPVDEAKWGFAVIEHSLWQAIPHHMRKADQALFAATGLRLPLEA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH APIRFASWMGGDRDGNPNVTAAVTREVLLLARWMAADLYLRDVDHLAAELSMQQASDALK CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAGDSAEPYRAVLKQLRERLRATRNWAHASLTATTPAPADVLHNNRDLLDPLELCFNSL HCCCCCCCHHHHHHHHHHHHHHHHHCHHHCEEEECCCCCHHHHCCCCCCCCHHHHHHHHH HECGMGVIADGPLLDCLRRAVTFGLFLVRLDVRQDSSRHSAAMTEITDYLGLGKYEEWDE HHCCCCEECCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCH EQRISFLTRELQNRRPLLPAHFKPSADTAEVLATCKEIAAAPGASLGSYVISMAGAASDV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH LAVQLLLKESGVLRPMRVVPLFETLADLDNAGPVIERLLLLPGYRARLQGPQEVMIGYSD HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHCCCCHHHEEECCC SAKDAGTTAAAWAQYRAQERLVEICREQQVELLLFHGRGGTVGRGGGPAHAAILSQPPGS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCH VAGRFRTTEQGEMIRFKFGLPDIAEQNLNLYLAAVLEATLLPPPPPTPEWRHLMDELAAD HCCCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GVAAYRAVVRENPQFVEYFRQSTPEQELGRLPLGSRPAKRRAGGIESLRAIPWIFGWTQT HHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHH RLMLPAWLGWETALSKALERGEGELLGQMREQWPFFRTRIDMLEMVLAKADADIALSYDE HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEECCHH RLVEPDLLPLGAHLRDLLSQACSVVLGLTGQSQLLAHSPDTLEFIRLRNTYLDPLHLLQA HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHH ELLARSRRQNVEQGSPVEQALLVSVAGIAAGLRNTG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA