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The map label for this gene is ybjK [C]

Identifier: 77457288

GI number: 77457288

Start: 1230567

End: 1231271

Strand: Direct

Name: ybjK [C]

Synonym: Pfl01_1061

Alternate gene names: 77457288

Gene position: 1230567-1231271 (Clockwise)

Preceding gene: 77457287

Following gene: 77457289

Centisome position: 19.11

GC content: 61.56

Gene sequence:

>705_bases
ATGGCTCAAGAGGGTGCAGCGGGAATCGCCACTGCGGTCGCTGAAAGTGTTCAGTACCAGGGCCGCAAGGCCAGCCGGCA
GGGCAGTGAACAGCGTCGACAGGACATTCTCGATGCGGCGATGCGCATTGTCGTACGCGACGGCGTGCGGGCCGTGCGTC
ACCGTGCGGTGGCGGCCGAGGCCGGTGTGCCGCTGTCGGCCACCACGTATTACTTCAAGGACATCGATGACCTGCTCACC
GATACCTTCGCCCAGTACGTCGAACGCAGCGCGGCCTACATGGCCAAGCTGTGGATCAACAACGAAGGCCTGCTGCGCGA
AATGGTGGTCAGCGGTGACGGCAGCCCGGAGTCCCGTTCGCAACTGGCCGACGATATCGCGCGTTTGATGGCTGATTACG
TGCATCGGCAACTGGTCAACCGTCGCGAGCATTTGATGGCTGAACAGGCATTCCGCCAGGAAGCGCTGCTCAACCCGCGT
CTGGCGGAACTGGTGCGTTCCCATCAGCAGATTCTGTTGCAGGGCACCTGCCAGTTGTTCCAGGTATTGGGCTCGCGCGA
GCCGCAGCAGGATGCCAAGGTGTTGACGGCGATTATCGGACGGATGGAATATCAGGGCCTGCTCAACGACGCCGAGCCTT
TGGCTGAAGAGGACATGCTCGGCATTCTGACGCGCTATATGCACCTGGTACTCGCGTCGGTGTAA

Upstream 100 bases:

>100_bases
CGCCTGAAATGGGCGGCTTTTTATTGCCTGTCTGGTACAAACGTATCAAATGGTTAATTTTGAAGAAAACAACAGAGGTA
TGCCTGTCGTGATCGGTGCA

Downstream 100 bases:

>100_bases
TTCTCGACCCTGATCGTTCCCTCGCTCTGCGTGGGAATGCCGCCATGGACGCTCCGCGTCCACTGTGACGCAGAGCGTCA
CTGTATGCATTCCCACGCAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAQEGAAGIATAVAESVQYQGRKASRQGSEQRRQDILDAAMRIVVRDGVRAVRHRAVAAEAGVPLSATTYYFKDIDDLLT
DTFAQYVERSAAYMAKLWINNEGLLREMVVSGDGSPESRSQLADDIARLMADYVHRQLVNRREHLMAEQAFRQEALLNPR
LAELVRSHQQILLQGTCQLFQVLGSREPQQDAKVLTAIIGRMEYQGLLNDAEPLAEEDMLGILTRYMHLVLASV

Sequences:

>Translated_234_residues
MAQEGAAGIATAVAESVQYQGRKASRQGSEQRRQDILDAAMRIVVRDGVRAVRHRAVAAEAGVPLSATTYYFKDIDDLLT
DTFAQYVERSAAYMAKLWINNEGLLREMVVSGDGSPESRSQLADDIARLMADYVHRQLVNRREHLMAEQAFRQEALLNPR
LAELVRSHQQILLQGTCQLFQVLGSREPQQDAKVLTAIIGRMEYQGLLNDAEPLAEEDMLGILTRYMHLVLASV
>Mature_233_residues
AQEGAAGIATAVAESVQYQGRKASRQGSEQRRQDILDAAMRIVVRDGVRAVRHRAVAAEAGVPLSATTYYFKDIDDLLTD
TFAQYVERSAAYMAKLWINNEGLLREMVVSGDGSPESRSQLADDIARLMADYVHRQLVNRREHLMAEQAFRQEALLNPRL
AELVRSHQQILLQGTCQLFQVLGSREPQQDAKVLTAIIGRMEYQGLLNDAEPLAEEDMLGILTRYMHLVLASV

Specific function: Unknown

COG id: COG3226

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26141; Mature: 26010

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEGAAGIATAVAESVQYQGRKASRQGSEQRRQDILDAAMRIVVRDGVRAVRHRAVAAE
CCCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVPLSATTYYFKDIDDLLTDTFAQYVERSAAYMAKLWINNEGLLREMVVSGDGSPESRS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
QLADDIARLMADYVHRQLVNRREHLMAEQAFRQEALLNPRLAELVRSHQQILLQGTCQLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QVLGSREPQQDAKVLTAIIGRMEYQGLLNDAEPLAEEDMLGILTRYMHLVLASV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQEGAAGIATAVAESVQYQGRKASRQGSEQRRQDILDAAMRIVVRDGVRAVRHRAVAAE
CCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVPLSATTYYFKDIDDLLTDTFAQYVERSAAYMAKLWINNEGLLREMVVSGDGSPESRS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
QLADDIARLMADYVHRQLVNRREHLMAEQAFRQEALLNPRLAELVRSHQQILLQGTCQLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QVLGSREPQQDAKVLTAIIGRMEYQGLLNDAEPLAEEDMLGILTRYMHLVLASV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA