| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457268
Identifier: 77457268
GI number: 77457268
Start: 1206066
End: 1207409
Strand: Direct
Name: 77457268
Synonym: Pfl01_1041
Alternate gene names: NA
Gene position: 1206066-1207409 (Clockwise)
Preceding gene: 77457264
Following gene: 77457269
Centisome position: 18.73
GC content: 42.71
Gene sequence:
>1344_bases ATGTGTAAAAAAACTGCACTTCGTCTCAAAAATAGCTATATTCAGTTCAATTTTTCGCACGAAGTGCAGGTTTTTTACAT GTTGATTGAATTTTCAGTTTCTAACTATCGCTCCTTTCGTGAGAAGCAGACGCTTTCGATGGTGGCAACCCCACGCCTTA GTAAAAAAAGAAACGTGTTTAAGCCTTTTGTGGATGGAGAAAAACTCCCAAATCTCCTGAAGGTCGCGGCGATTTATGGA CCTAATGCCTCTGGAAAGTCTTCGCTTATTCAGGCCTTGGGTGTAGTGACAGAGTTGTTGAGTATCACACCTACAGCAGA TAATAAGGGCTTGCCTGTAAAGGCATTTAGATTTGATCCTGAACTTGCGGATCTGCCTAGTAATTTTGAATACAACTTTA TAAAAAATGGACTTCGCTATCAGTTTGTTTTAGGGGTTACAGAAAAGAGAATTGTTGAGGAAAGGCTTACATCTTACCCA AAGGGAAAGGAGTCTTTGCTATATAGTCGTGAACTAACGAGCAAGGGCGAGCGTTATATCTTTGGTGAAGGGCTGGAGGG CGGGAAAGAGGTCCATGAGGCTTGGAGGAGACTGACAAGCCCTAAAACACTTTTTATTGCGCAGTCAGTAGCAAATAGTA GTGAGGAATTGAGGCAGCTTAGAGAACCGTTTGAGTGGTTTAAAACTACTCTTTGGTCAATTGAACAGGATTCGATGTTG CGTTGGTCTACCGCGTCAATAAGGATTCTGAAAAAAGTTCCTAGGTTTACTGAACATTTGGAACAGTTTTTGCGGGATGT AGATATTCCAGTTTCCAACATTGAGTTTGAAGATTCAGTAGCTGAAACGGCGCTGATGAAAGCCTCCGAAGCTTTATCGG CAGAAAATGTGTTTGGAGGAGATCAGAACGATAAGACGACTCTAACGCACACAACTCTATTGGGTAGTGCGGAGTTTGAT TTTTCAGAGGAGTCAGGTGGTACAAAAAACCTTATTGGTTTTTGGTTGCCTTGGACAACTATGAATTTTAGGTCGGATAG TGAAGGCGGCATATTGGCGGTTGACGAGCTTGATAGTAGCTTGCACCCGGAAATTGTCGCCGATCTTATAGAGAAGCACT TAGATAGGAAAATAGACTCACAGTTGATTTTCACCACGCATGATACGCACTTGATGAATGCTAAGGTGCTAAGGCGTGAT CAGTTTTGGATAACTGAGCGCGATGAAAATGGTGCCACTAAGCTTTTCTCAATCCATGATTTTGAGGGGCGAGAAGGTGA GGATGTAGAAAAGCGTTATTTTGAAGGGCGCTATCGTGGACTACCTCTGATCCGGAGGAAATAG
Upstream 100 bases:
>100_bases CTAGCAGGAGTTTCACCGCCAAGTCCACATAGTCGACGTGATCTGTAGGAAATGCGGAGGTCCTTCGTTCGCTAGGACCT TTCGGCGTTGAAAATTTATC
Downstream 100 bases:
>100_bases TCATGGGCCGCTCAGCAAATTCTTTTGATCGGAAAGGCTCGAAGTTCAAACCACAGCCGAAGATTCTAATTCTGTGTGAG GATACTAAGTCTGGAAAACG
Product: ATPase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MCKKTALRLKNSYIQFNFSHEVQVFYMLIEFSVSNYRSFREKQTLSMVATPRLSKKRNVFKPFVDGEKLPNLLKVAAIYG PNASGKSSLIQALGVVTELLSITPTADNKGLPVKAFRFDPELADLPSNFEYNFIKNGLRYQFVLGVTEKRIVEERLTSYP KGKESLLYSRELTSKGERYIFGEGLEGGKEVHEAWRRLTSPKTLFIAQSVANSSEELRQLREPFEWFKTTLWSIEQDSML RWSTASIRILKKVPRFTEHLEQFLRDVDIPVSNIEFEDSVAETALMKASEALSAENVFGGDQNDKTTLTHTTLLGSAEFD FSEESGGTKNLIGFWLPWTTMNFRSDSEGGILAVDELDSSLHPEIVADLIEKHLDRKIDSQLIFTTHDTHLMNAKVLRRD QFWITERDENGATKLFSIHDFEGREGEDVEKRYFEGRYRGLPLIRRK
Sequences:
>Translated_447_residues MCKKTALRLKNSYIQFNFSHEVQVFYMLIEFSVSNYRSFREKQTLSMVATPRLSKKRNVFKPFVDGEKLPNLLKVAAIYG PNASGKSSLIQALGVVTELLSITPTADNKGLPVKAFRFDPELADLPSNFEYNFIKNGLRYQFVLGVTEKRIVEERLTSYP KGKESLLYSRELTSKGERYIFGEGLEGGKEVHEAWRRLTSPKTLFIAQSVANSSEELRQLREPFEWFKTTLWSIEQDSML RWSTASIRILKKVPRFTEHLEQFLRDVDIPVSNIEFEDSVAETALMKASEALSAENVFGGDQNDKTTLTHTTLLGSAEFD FSEESGGTKNLIGFWLPWTTMNFRSDSEGGILAVDELDSSLHPEIVADLIEKHLDRKIDSQLIFTTHDTHLMNAKVLRRD QFWITERDENGATKLFSIHDFEGREGEDVEKRYFEGRYRGLPLIRRK >Mature_447_residues MCKKTALRLKNSYIQFNFSHEVQVFYMLIEFSVSNYRSFREKQTLSMVATPRLSKKRNVFKPFVDGEKLPNLLKVAAIYG PNASGKSSLIQALGVVTELLSITPTADNKGLPVKAFRFDPELADLPSNFEYNFIKNGLRYQFVLGVTEKRIVEERLTSYP KGKESLLYSRELTSKGERYIFGEGLEGGKEVHEAWRRLTSPKTLFIAQSVANSSEELRQLREPFEWFKTTLWSIEQDSML RWSTASIRILKKVPRFTEHLEQFLRDVDIPVSNIEFEDSVAETALMKASEALSAENVFGGDQNDKTTLTHTTLLGSAEFD FSEESGGTKNLIGFWLPWTTMNFRSDSEGGILAVDELDSSLHPEIVADLIEKHLDRKIDSQLIFTTHDTHLMNAKVLRRD QFWITERDENGATKLFSIHDFEGREGEDVEKRYFEGRYRGLPLIRRK
Specific function: Unknown
COG id: COG1106
COG function: function code R; Predicted ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51328; Mature: 51328
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00847 MCM_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKKTALRLKNSYIQFNFSHEVQVFYMLIEFSVSNYRSFREKQTLSMVATPRLSKKRNVF CCCHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC KPFVDGEKLPNLLKVAAIYGPNASGKSSLIQALGVVTELLSITPTADNKGLPVKAFRFDP CCCCCCHHCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC ELADLPSNFEYNFIKNGLRYQFVLGVTEKRIVEERLTSYPKGKESLLYSRELTSKGERYI HHHCCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE FGEGLEGGKEVHEAWRRLTSPKTLFIAQSVANSSEELRQLREPFEWFKTTLWSIEQDSML EECCCCCHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEE RWSTASIRILKKVPRFTEHLEQFLRDVDIPVSNIEFEDSVAETALMKASEALSAENVFGG EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCC DQNDKTTLTHTTLLGSAEFDFSEESGGTKNLIGFWLPWTTMNFRSDSEGGILAVDELDSS CCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCCEEEEECCCCC LHPEIVADLIEKHLDRKIDSQLIFTTHDTHLMNAKVLRRDQFWITERDENGATKLFSIHD CCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCEEEEEEEC FEGREGEDVEKRYFEGRYRGLPLIRRK CCCCCCCHHHHHHHCCHHCCCCCCCCC >Mature Secondary Structure MCKKTALRLKNSYIQFNFSHEVQVFYMLIEFSVSNYRSFREKQTLSMVATPRLSKKRNVF CCCHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC KPFVDGEKLPNLLKVAAIYGPNASGKSSLIQALGVVTELLSITPTADNKGLPVKAFRFDP CCCCCCHHCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC ELADLPSNFEYNFIKNGLRYQFVLGVTEKRIVEERLTSYPKGKESLLYSRELTSKGERYI HHHCCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE FGEGLEGGKEVHEAWRRLTSPKTLFIAQSVANSSEELRQLREPFEWFKTTLWSIEQDSML EECCCCCHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEE RWSTASIRILKKVPRFTEHLEQFLRDVDIPVSNIEFEDSVAETALMKASEALSAENVFGG EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCC DQNDKTTLTHTTLLGSAEFDFSEESGGTKNLIGFWLPWTTMNFRSDSEGGILAVDELDSS CCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCCEEEEECCCCC LHPEIVADLIEKHLDRKIDSQLIFTTHDTHLMNAKVLRRDQFWITERDENGATKLFSIHD CCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCEEEEEEEC FEGREGEDVEKRYFEGRYRGLPLIRRK CCCCCCCHHHHHHHCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA