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The map label for this gene is yrdA [C]

Identifier: 77457238

GI number: 77457238

Start: 1176395

End: 1176919

Strand: Direct

Name: yrdA [C]

Synonym: Pfl01_1011

Alternate gene names: 77457238

Gene position: 1176395-1176919 (Clockwise)

Preceding gene: 77457237

Following gene: 77457239

Centisome position: 18.27

GC content: 61.33

Gene sequence:

>525_bases
ATGAAATACCGCCTGGGCGACGCCCGCGTCGAAACCCATCCGCAGAGCTGGGTCGCCCCCAACGCCGTGCTCGTGGGCAA
GGTCAGACTGGAAGAGGGCGCCAACGTCTGGTTCAACGCCGTGCTGCGTGGGGACAACGAACTGATCCTGATCGGCAAGA
ACAGCAACGTGCAGGACGGCACGGTGATGCACACCGACATGGGCTATCCGCTGACCATCGGCACCGGCGTGACCATCGGC
CACAACGCCATGCTCCACGGCTGCACGGTCGGCGACTACAGCCTGATCGGCATCAACGCGGTCATCCTCAACGGCGCGAA
GATCGGCAAGAACTGCATCATCGGCGCCAATTCGCTGATCGGCGAAGGCAAGGAAATTCCTGACGGTTCACTGGTGATGG
GCTCGCCGGGCAAGGTCGTGCGCGAACTGACCGAGCAACAGAAGAAGATGCTCGAAGCCAGTGCCGCGCATTATGTGCAT
AACTCTCAGCGCTATGCGCGCGATCTGGTCGAGCAGGAAGAATGA

Upstream 100 bases:

>100_bases
ATGACGCCAAAATCAGCCTGCATCAGCCGCCTAAAAGCTTTATCAACACCTGAAGCCATCGCTCGAATGGCCAGCCATCG
TGAGCCCTGAGGAAAACAAG

Downstream 100 bases:

>100_bases
CAACCCCGGAAAGACCCGTTGCCTCGCCGTGCGTGAGCATTTGCGCACTGGACGAAGACGACATTTGTACCGGTTGCCAG
CGCACGGTCGAGGAAATTAC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKYRLGDARVETHPQSWVAPNAVLVGKVRLEEGANVWFNAVLRGDNELILIGKNSNVQDGTVMHTDMGYPLTIGTGVTIG
HNAMLHGCTVGDYSLIGINAVILNGAKIGKNCIIGANSLIGEGKEIPDGSLVMGSPGKVVRELTEQQKKMLEASAAHYVH
NSQRYARDLVEQEE

Sequences:

>Translated_174_residues
MKYRLGDARVETHPQSWVAPNAVLVGKVRLEEGANVWFNAVLRGDNELILIGKNSNVQDGTVMHTDMGYPLTIGTGVTIG
HNAMLHGCTVGDYSLIGINAVILNGAKIGKNCIIGANSLIGEGKEIPDGSLVMGSPGKVVRELTEQQKKMLEASAAHYVH
NSQRYARDLVEQEE
>Mature_174_residues
MKYRLGDARVETHPQSWVAPNAVLVGKVRLEEGANVWFNAVLRGDNELILIGKNSNVQDGTVMHTDMGYPLTIGTGVTIG
HNAMLHGCTVGDYSLIGINAVILNGAKIGKNCIIGANSLIGEGKEIPDGSLVMGSPGKVVRELTEQQKKMLEASAAHYVH
NSQRYARDLVEQEE

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=152, Percent_Identity=39.4736842105263, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1787667, Length=136, Percent_Identity=44.1176470588235, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI87081681, Length=135, Percent_Identity=37.037037037037, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18764; Mature: 18764

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRLGDARVETHPQSWVAPNAVLVGKVRLEEGANVWFNAVLRGDNELILIGKNSNVQDG
CCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCC
TVMHTDMGYPLTIGTGVTIGHNAMLHGCTVGDYSLIGINAVILNGAKIGKNCIIGANSLI
EEEEECCCCCEEECCCEEECCCCEEEECCCCCEEEEEEEEEEEECCCCCCEEEEECCHHC
GEGKEIPDGSLVMGSPGKVVRELTEQQKKMLEASAAHYVHNSQRYARDLVEQEE
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MKYRLGDARVETHPQSWVAPNAVLVGKVRLEEGANVWFNAVLRGDNELILIGKNSNVQDG
CCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCC
TVMHTDMGYPLTIGTGVTIGHNAMLHGCTVGDYSLIGINAVILNGAKIGKNCIIGANSLI
EEEEECCCCCEEECCCEEECCCCEEEECCCCCEEEEEEEEEEEECCCCCCEEEEECCHHC
GEGKEIPDGSLVMGSPGKVVRELTEQQKKMLEASAAHYVHNSQRYARDLVEQEE
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]