| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457228
Identifier: 77457228
GI number: 77457228
Start: 1165785
End: 1166417
Strand: Direct
Name: 77457228
Synonym: Pfl01_1001
Alternate gene names: NA
Gene position: 1165785-1166417 (Clockwise)
Preceding gene: 77457227
Following gene: 77457229
Centisome position: 18.11
GC content: 48.5
Gene sequence:
>633_bases TTGCTTGATGTAGTCACTCCTCGCATCAATACGAGTACTGGATTGGGGCAGGCTTTGATTTCGATGTTCAAGTCGGTCGA AGCAGAGTTGATGCAAGAGAATGCTGTTCCCGGCGCGGTGAAGATCATTGTGTTCGGAGGGTGCGCAGTTCATCTCTATA CAAATCACCGCATTTCCATCGATGTTGACGCTGAGATTTATGAAGCTTGTATTCCTGACGGGTTAGATCTTCAAGCCTTG CTTGCGCAAGTCCCGGAACCTTTTATGGACGAGCGATCAGCTCGAATGATGGAACTGAACTATGACCTGCAATACAACAC GAGTTTTGGTCCGATTCATGAGGACTACTGGGCACGTAGTATCCCGCTTTCGGAGTTTTCAGAGATGTCTCCACTACAGG TCCACATTGCAGCACCTATCGATGTCGCTATAACAAAGCTTGGCAGGGCCACCGATCATGATATTGGGGACATCAACGCG CTTCTTCGATCCGGTTTCATTCTGTCCAGTGAATTCCGGCGTCTGGCATTGCAGGCCATTGATGTATATGTTGGCAACAA AGAGCCGCCCACCTCGGTGCTGATCAATATTTTGCAGGACTACCTGGAGGAATCAGATGTTGAAGTCATTTGA
Upstream 100 bases:
>100_bases TTTTCCTACAATTTTTTCAGGTTGTCCCTCGGAAATCACATCCCTACTTTGGCGAACTCGTTGTTGAAACAATCGCCAGG ATCCGAGGTTTAAAATGGAA
Downstream 100 bases:
>100_bases CGATCACGTCCTTTCATCCGCATTGGACACTTTGGTCAGAAGTCCTCTGGATCAGGCTGATGGCGTAGCGTTGGTGAATG CGGCCAAAGAAGTCTGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLDVVTPRINTSTGLGQALISMFKSVEAELMQENAVPGAVKIIVFGGCAVHLYTNHRISIDVDAEIYEACIPDGLDLQAL LAQVPEPFMDERSARMMELNYDLQYNTSFGPIHEDYWARSIPLSEFSEMSPLQVHIAAPIDVAITKLGRATDHDIGDINA LLRSGFILSSEFRRLALQAIDVYVGNKEPPTSVLINILQDYLEESDVEVI
Sequences:
>Translated_210_residues MLDVVTPRINTSTGLGQALISMFKSVEAELMQENAVPGAVKIIVFGGCAVHLYTNHRISIDVDAEIYEACIPDGLDLQAL LAQVPEPFMDERSARMMELNYDLQYNTSFGPIHEDYWARSIPLSEFSEMSPLQVHIAAPIDVAITKLGRATDHDIGDINA LLRSGFILSSEFRRLALQAIDVYVGNKEPPTSVLINILQDYLEESDVEVI >Mature_210_residues MLDVVTPRINTSTGLGQALISMFKSVEAELMQENAVPGAVKIIVFGGCAVHLYTNHRISIDVDAEIYEACIPDGLDLQAL LAQVPEPFMDERSARMMELNYDLQYNTSFGPIHEDYWARSIPLSEFSEMSPLQVHIAAPIDVAITKLGRATDHDIGDINA LLRSGFILSSEFRRLALQAIDVYVGNKEPPTSVLINILQDYLEESDVEVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23265; Mature: 23265
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVVTPRINTSTGLGQALISMFKSVEAELMQENAVPGAVKIIVFGGCAVHLYTNHRISI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCEEEE DVDAEIYEACIPDGLDLQALLAQVPEPFMDERSARMMELNYDLQYNTSFGPIHEDYWARS EECHHHHHHHCCCCCCHHHHHHHCCCCHHCCCCCEEEEEECCEEECCCCCCCCHHHHHCC IPLSEFSEMSPLQVHIAAPIDVAITKLGRATDHDIGDINALLRSGFILSSEFRRLALQAI CCHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH DVYVGNKEPPTSVLINILQDYLEESDVEVI HHEECCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLDVVTPRINTSTGLGQALISMFKSVEAELMQENAVPGAVKIIVFGGCAVHLYTNHRISI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCEEEE DVDAEIYEACIPDGLDLQALLAQVPEPFMDERSARMMELNYDLQYNTSFGPIHEDYWARS EECHHHHHHHCCCCCCHHHHHHHCCCCHHCCCCCEEEEEECCEEECCCCCCCCHHHHHCC IPLSEFSEMSPLQVHIAAPIDVAITKLGRATDHDIGDINALLRSGFILSSEFRRLALQAI CCHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH DVYVGNKEPPTSVLINILQDYLEESDVEVI HHEECCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA