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The map label for this gene is recO

Identifier: 77457223

GI number: 77457223

Start: 1158040

End: 1158729

Strand: Direct

Name: recO

Synonym: Pfl01_0996

Alternate gene names: 77457223

Gene position: 1158040-1158729 (Clockwise)

Preceding gene: 77457222

Following gene: 77457224

Centisome position: 17.99

GC content: 64.35

Gene sequence:

>690_bases
ATGTCGCAAAGCCCGCCTCCCGCCCAACCCGCCTACGTCCTCCACTCCCGCGCCTACCGCGAAACCAGCGCATTGGTGGA
CTTCCTCACGCCGCAAGGTCGGCTGCGGGCGGTGTTGCGCAGTGCGCGGGGCAAGGCCGGGACGTTGGCGCGGCCATTCG
TGCCGCTGGAAGTGGAGTTTCGCGGCAAGGGTGAGTTGAAGAATGTCGGGCGCATGGAAAGCGTCGGCAACGCGACCTGG
ATGGTCGGCGAGGCGCTGTTCAGTGGCCTGTATCTCAATGAACTGTTGATTCGCCTGCTACCCGCCGAAGACCCGCACCC
GGCGGTGTTCGATCATTACGCCGCGACCTTGCTGGCATTGGCCGAAGGCCGGCCGCTGGAACCGCTGCTGCGTTCCTTCG
AGTGGCGGCTGCTTGATGACCTCGGTTACGGTTTTTCCCTGAACACCGACATCAACGACGAGCCCGTTGCTGTTGATGGT
CTCTACCGTTTGCAGGTGGATGCCGGACTCGAGCGTGTCTACCTGCTGCAACCCGGTCTGTTCAACGGCACCGAACTGCT
GGCCATGGCCGAAGCCGACTGGTCGGCACCGGGCGCACTGTCCGCCGCCAAGCGCCTGATGCGTCAAGCCTTGGCGGTGC
ATCTGGGCGGTCGTCCCCTCGTCAGTCGAGAGCTGTTTCGCAAGCCCTGA

Upstream 100 bases:

>100_bases
CGACATCCTTGTTGTCTGATACACCCTCATCGCGAGCAGGCTCGCTCCCACAGTAGTTTTGGGTTTGTGTGTAAAACTGC
GTTTCGTCATCGAGAACTCA

Downstream 100 bases:

>100_bases
TATGCTGTGCGCCGAATCTTTCCCTTCAGGAGCGCATCCGTGACCATCAGCAATCGCATTCTTCTTGGCGTGAACATCGA
CCACGTCGCCACCCTGCGTC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSQSPPPAQPAYVLHSRAYRETSALVDFLTPQGRLRAVLRSARGKAGTLARPFVPLEVEFRGKGELKNVGRMESVGNATW
MVGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEGRPLEPLLRSFEWRLLDDLGYGFSLNTDINDEPVAVDG
LYRLQVDAGLERVYLLQPGLFNGTELLAMAEADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP

Sequences:

>Translated_229_residues
MSQSPPPAQPAYVLHSRAYRETSALVDFLTPQGRLRAVLRSARGKAGTLARPFVPLEVEFRGKGELKNVGRMESVGNATW
MVGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEGRPLEPLLRSFEWRLLDDLGYGFSLNTDINDEPVAVDG
LYRLQVDAGLERVYLLQPGLFNGTELLAMAEADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
>Mature_228_residues
SQSPPPAQPAYVLHSRAYRETSALVDFLTPQGRLRAVLRSARGKAGTLARPFVPLEVEFRGKGELKNVGRMESVGNATWM
VGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEGRPLEPLLRSFEWRLLDDLGYGFSLNTDINDEPVAVDGL
YRLQVDAGLERVYLLQPGLFNGTELLAMAEADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=227, Percent_Identity=40.9691629955947, Blast_Score=137, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_PSEPF (Q3KHL7)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_346728.1
- ProteinModelPortal:   Q3KHL7
- STRING:   Q3KHL7
- GeneID:   3715998
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_0996
- eggNOG:   COG1381
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- ProtClustDB:   PRK00085
- BioCyc:   PFLU205922:PFL_0996-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 25216; Mature: 25085

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSPPPAQPAYVLHSRAYRETSALVDFLTPQGRLRAVLRSARGKAGTLARPFVPLEVEF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEE
RGKGELKNVGRMESVGNATWMVGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLAL
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AEGRPLEPLLRSFEWRLLDDLGYGFSLNTDINDEPVAVDGLYRLQVDAGLERVYLLQPGL
HCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCEEEEEECCCCCEEEEECCCC
FNGTELLAMAEADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SQSPPPAQPAYVLHSRAYRETSALVDFLTPQGRLRAVLRSARGKAGTLARPFVPLEVEF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEE
RGKGELKNVGRMESVGNATWMVGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLAL
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AEGRPLEPLLRSFEWRLLDDLGYGFSLNTDINDEPVAVDGLYRLQVDAGLERVYLLQPGL
HCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCEEEEEECCCCCEEEEECCCC
FNGTELLAMAEADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA