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The map label for this gene is ndpA [C]

Identifier: 77457210

GI number: 77457210

Start: 1142399

End: 1143403

Strand: Reverse

Name: ndpA [C]

Synonym: Pfl01_0983

Alternate gene names: 77457210

Gene position: 1143403-1142399 (Counterclockwise)

Preceding gene: 77457212

Following gene: 77457209

Centisome position: 17.76

GC content: 61.0

Gene sequence:

>1005_bases
ATGCCGATCCGTCATTGCATCGTCCATTTGATCGACAAAAAACCCGACGGCACACCCGCAGTCCTGCACGCCCGTGACTC
CGAACTGGCTGAGTCCGCAGCCATCGAGAACATGCTCGCCGATCTCAACGAGAGCTATAACGCCAAACAGGGTAAAGCCT
GGGGGTTGTTCCATCCGGAGTCCGGCGCGTTCCCGTTCAGCGGCTGGCTGAAGGAATACATGGAAGGCGGCAAGGACTTC
ACCGCGTTCAGCAAGGTCGCGGTCGAGCACCTGCAAAAGCTGATGGAAGAATCGAACCTGTCGGTCGGCGGCCACGTGCT
GTTCGCCCACTATCAGCAAGGCATGACTGATTACCTGGCCATCGCCCTGCTGCACCACAGCGAGGGCGTGGCGGTGACCG
ATCAACTGGACGTGACGCCGTCGCGCCACCTCGACCTCGGTCAACTGCACCTGGCGGCGCGGATCAACGTCTCCGAGTGG
CAGAACAACAAGCAGTCCAAGCAGTACATATCGTTCATCAAGGGCAAGAACGGCAAGAAGGTCTCGGAGTACTTCCGCGA
CTTCATCGGCTGCCAGGAAGGCGTCGACGGCCCGGGCGAAACCCGCACCCTGCTCAAGGCCTTCAGCGACTTCGTCGAGA
GCGAAGACCTGCCGGAAGACTCCGCGCGCGAAAAGACCAAGACCCTGGTCGACTACGCCAGCAGCCAGGCCAAGCTCGGC
GAGCCGATGGGCCTGGAAGAACTGTCTGAGCTGATCGACGAAGAGCGCCCGAAAGCCTTCTACGACCACATCCGCAACAA
GGATTACGGCCTGTCGCCGGAGATCCCGGCGGATAAGCGCACGCTCAACCAGTTCCGCCGCTTCACCGGCCGCGCCGAAG
GCCTGTCGATCAGCTTCGAAGCGCACCTGCTGGGCTCGAAGATCGAATACGACGAAGAAGCCGGGACTTTGGTCATCAAA
GGCCTGCCGACCTCGCTCACCGATCAGCTGAAGCGTCGCAACTGA

Upstream 100 bases:

>100_bases
CGGATTTGCCCTTCACCCCGCGCCAAATCCAGTGGTTGCGGTACACTGGGCGCTTTTTCGGGGGAGCCCGCCCTCCTCCC
TTCCACCAGCCGAGAAGCCT

Downstream 100 bases:

>100_bases
TGCTCGGCAATGTGCTGAAGAAAGTCGCACTGGTTCTGCTGGTGGTTGTGGTCTATCAGAACTGGGGCAAGATCGAGCGG
GTGTTCAACCCGTCACAGGT

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MPIRHCIVHLIDKKPDGTPAVLHARDSELAESAAIENMLADLNESYNAKQGKAWGLFHPESGAFPFSGWLKEYMEGGKDF
TAFSKVAVEHLQKLMEESNLSVGGHVLFAHYQQGMTDYLAIALLHHSEGVAVTDQLDVTPSRHLDLGQLHLAARINVSEW
QNNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEDSAREKTKTLVDYASSQAKLG
EPMGLEELSELIDEERPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEAHLLGSKIEYDEEAGTLVIK
GLPTSLTDQLKRRN

Sequences:

>Translated_334_residues
MPIRHCIVHLIDKKPDGTPAVLHARDSELAESAAIENMLADLNESYNAKQGKAWGLFHPESGAFPFSGWLKEYMEGGKDF
TAFSKVAVEHLQKLMEESNLSVGGHVLFAHYQQGMTDYLAIALLHHSEGVAVTDQLDVTPSRHLDLGQLHLAARINVSEW
QNNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEDSAREKTKTLVDYASSQAKLG
EPMGLEELSELIDEERPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEAHLLGSKIEYDEEAGTLVIK
GLPTSLTDQLKRRN
>Mature_333_residues
PIRHCIVHLIDKKPDGTPAVLHARDSELAESAAIENMLADLNESYNAKQGKAWGLFHPESGAFPFSGWLKEYMEGGKDFT
AFSKVAVEHLQKLMEESNLSVGGHVLFAHYQQGMTDYLAIALLHHSEGVAVTDQLDVTPSRHLDLGQLHLAARINVSEWQ
NNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEDSAREKTKTLVDYASSQAKLGE
PMGLEELSELIDEERPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEAHLLGSKIEYDEEAGTLVIKG
LPTSLTDQLKRRN

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=333, Percent_Identity=34.8348348348348, Blast_Score=208, Evalue=5e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 37396; Mature: 37265

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRHCIVHLIDKKPDGTPAVLHARDSELAESAAIENMLADLNESYNAKQGKAWGLFHPE
CCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
SGAFPFSGWLKEYMEGGKDFTAFSKVAVEHLQKLMEESNLSVGGHVLFAHYQQGMTDYLA
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHH
IALLHHSEGVAVTDQLDVTPSRHLDLGQLHLAARINVSEWQNNKQSKQYISFIKGKNGKK
HHHHHCCCCCEEECCCCCCCCCCCCHHHHHEEEECCHHHHHCCHHHHHHHHHHHCCCCCH
VSEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEDSAREKTKTLVDYASSQAKLG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
EPMGLEELSELIDEERPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFE
CCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
AHLLGSKIEYDEEAGTLVIKGLPTSLTDQLKRRN
HHHCCCCCCCCCCCCEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
PIRHCIVHLIDKKPDGTPAVLHARDSELAESAAIENMLADLNESYNAKQGKAWGLFHPE
CHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
SGAFPFSGWLKEYMEGGKDFTAFSKVAVEHLQKLMEESNLSVGGHVLFAHYQQGMTDYLA
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHH
IALLHHSEGVAVTDQLDVTPSRHLDLGQLHLAARINVSEWQNNKQSKQYISFIKGKNGKK
HHHHHCCCCCEEECCCCCCCCCCCCHHHHHEEEECCHHHHHCCHHHHHHHHHHHCCCCCH
VSEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEDSAREKTKTLVDYASSQAKLG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
EPMGLEELSELIDEERPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFE
CCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
AHLLGSKIEYDEEAGTLVIKGLPTSLTDQLKRRN
HHHCCCCCCCCCCCCEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA