Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yoaV [H]

Identifier: 77457161

GI number: 77457161

Start: 1085295

End: 1086197

Strand: Direct

Name: yoaV [H]

Synonym: Pfl01_0934

Alternate gene names: 77457161

Gene position: 1085295-1086197 (Clockwise)

Preceding gene: 77457160

Following gene: 77457165

Centisome position: 16.86

GC content: 61.02

Gene sequence:

>903_bases
ATGAACCTGTCGTTGTATTTGTTGACCGTGCTGATCTGGGGCACCACCTGGATCGCCTTGAAGTGGCAGCTGGGCGTGGT
GGCGATTCCGGTGTCGATCGTCTATCGCTTCGGTCTCGCCGCGCTGGTCCTGTTTGCGCTGTTGCTGATCAGCCGGCGCC
TGCAACCGATGAACCGGCGCGGGCATCTGATCTGTGTCGCGCAGGGCTTGTGCCTGTTCTGCGTCAATTTCATGTGCTTT
CTGACTGCCAGCCAATGGATTCCCAGCGGTCTGGTGGCGGTGGTGTTCTCTACTGCGACCTTGTGGAATGCGCTGAATGC
GCGAGTGTTCTTCGGCCAGCGTATCGCGCGTAATGTGCTGATGGGCGGGGCGCTGGGACTTGGCGGTCTGGGCCTGTTGT
TCTGGCCTGAGCTGGCCGGGCATCACGCCAGTCCGCAAACTCTGCTCGGCCTTGGCCTGGCACTCTGCGGCACCTTGTGT
TTCTCGGCGGGCAACATGCTCTCGAGCCTGCAACAGAAGGCTGGCCTCAAGCCGCTGACGACCAATGCGTGGGGTATGGC
TTACGGTGCAGCGATGCTGTCGGTGTGGTGCCTGGTCAAGGGCATTCCGTTCGAGATGGAATGGACGTCGCGCTACATCG
GCGCCTTGCTGTACCTGGTCATTCCCGGGTCGGTGATCGGCTTCACCGCGTACCTGACACTGGTCGGTCGTATGGGACCA
GAGCGCGCGGCTTATTGCACGGTGCTGTTCCCGGTGGTGGCGCTGAACGTATCGGCCTTTGCCGAAGGCTATCAATGGAC
GGCGCCGGCGTTGGCTGGACTGGTGCTGGTGATGCTGGGCAATGTGTTGGTGTTTCGTAAACCGAAGGCGCTAGTGTCGC
CGGTACAAGGAAAGTTGGCGTGA

Upstream 100 bases:

>100_bases
GAATACTTCGTGCAGTGCGGGTAGTTAAAAAGAGCAATTTTTTGCAAGCGTGAAAGGTCGTCCTCAGCAGACACTGAAAC
CCAATCGAGGAGTGTCTGCC

Downstream 100 bases:

>100_bases
GATAAACGAGCGCTGAACTTCAGCGCTCGACTTTCAATGTGATGTAGATCATCACCGGGAATATAAAGTCAACAATATGC
CGTGCCCAGTCCTTGGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNLSLYLLTVLIWGTTWIALKWQLGVVAIPVSIVYRFGLAALVLFALLLISRRLQPMNRRGHLICVAQGLCLFCVNFMCF
LTASQWIPSGLVAVVFSTATLWNALNARVFFGQRIARNVLMGGALGLGGLGLLFWPELAGHHASPQTLLGLGLALCGTLC
FSAGNMLSSLQQKAGLKPLTTNAWGMAYGAAMLSVWCLVKGIPFEMEWTSRYIGALLYLVIPGSVIGFTAYLTLVGRMGP
ERAAYCTVLFPVVALNVSAFAEGYQWTAPALAGLVLVMLGNVLVFRKPKALVSPVQGKLA

Sequences:

>Translated_300_residues
MNLSLYLLTVLIWGTTWIALKWQLGVVAIPVSIVYRFGLAALVLFALLLISRRLQPMNRRGHLICVAQGLCLFCVNFMCF
LTASQWIPSGLVAVVFSTATLWNALNARVFFGQRIARNVLMGGALGLGGLGLLFWPELAGHHASPQTLLGLGLALCGTLC
FSAGNMLSSLQQKAGLKPLTTNAWGMAYGAAMLSVWCLVKGIPFEMEWTSRYIGALLYLVIPGSVIGFTAYLTLVGRMGP
ERAAYCTVLFPVVALNVSAFAEGYQWTAPALAGLVLVMLGNVLVFRKPKALVSPVQGKLA
>Mature_300_residues
MNLSLYLLTVLIWGTTWIALKWQLGVVAIPVSIVYRFGLAALVLFALLLISRRLQPMNRRGHLICVAQGLCLFCVNFMCF
LTASQWIPSGLVAVVFSTATLWNALNARVFFGQRIARNVLMGGALGLGGLGLLFWPELAGHHASPQTLLGLGLALCGTLC
FSAGNMLSSLQQKAGLKPLTTNAWGMAYGAAMLSVWCLVKGIPFEMEWTSRYIGALLYLVIPGSVIGFTAYLTLVGRMGP
ERAAYCTVLFPVVALNVSAFAEGYQWTAPALAGLVLVMLGNVLVFRKPKALVSPVQGKLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32296; Mature: 32296

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSLYLLTVLIWGTTWIALKWQLGVVAIPVSIVYRFGLAALVLFALLLISRRLQPMNRR
CCHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GHLICVAQGLCLFCVNFMCFLTASQWIPSGLVAVVFSTATLWNALNARVFFGQRIARNVL
CCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGGALGLGGLGLLFWPELAGHHASPQTLLGLGLALCGTLCFSAGNMLSSLQQKAGLKPLT
HCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TNAWGMAYGAAMLSVWCLVKGIPFEMEWTSRYIGALLYLVIPGSVIGFTAYLTLVGRMGP
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
ERAAYCTVLFPVVALNVSAFAEGYQWTAPALAGLVLVMLGNVLVFRKPKALVSPVQGKLA
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHEEECCHHHHCCCCCCCC
>Mature Secondary Structure
MNLSLYLLTVLIWGTTWIALKWQLGVVAIPVSIVYRFGLAALVLFALLLISRRLQPMNRR
CCHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GHLICVAQGLCLFCVNFMCFLTASQWIPSGLVAVVFSTATLWNALNARVFFGQRIARNVL
CCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGGALGLGGLGLLFWPELAGHHASPQTLLGLGLALCGTLCFSAGNMLSSLQQKAGLKPLT
HCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TNAWGMAYGAAMLSVWCLVKGIPFEMEWTSRYIGALLYLVIPGSVIGFTAYLTLVGRMGP
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
ERAAYCTVLFPVVALNVSAFAEGYQWTAPALAGLVLVMLGNVLVFRKPKALVSPVQGKLA
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHEEECCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]