Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77457145

Identifier: 77457145

GI number: 77457145

Start: 1068148

End: 1068465

Strand: Reverse

Name: 77457145

Synonym: Pfl01_0918

Alternate gene names: NA

Gene position: 1068465-1068148 (Counterclockwise)

Preceding gene: 77457146

Following gene: 77457143

Centisome position: 16.6

GC content: 60.38

Gene sequence:

>318_bases
ATGGACAATCCTTTTCAGATCATTACCGATGCCTTTGCGCCGGACTATCAGATCAACCTGAGCATTCAGGGGCTCGACGG
CAGCATCATGCTGACCCTCTCCAATGGCGGCCGGATCGTCGCCAAACGGATGATCAGCGCCGAACAGCGCAACGACCCCA
AACGCCTCAAACGGCTGGTGCAAAGCATTCAGTTCGGCATCGCCATCGAACAGGGCCACAGCGCCATGGCGATCCTTGAT
GCCATGACCCGCGGCGACGGAATCACTCCGCCACCGCGTCGGGCCAAACATCAGCCCCGGCCAGCCGCCGGCCTTTAA

Upstream 100 bases:

>100_bases
GAAGGAGACAGGACCACGGAAGGGCCGATGGTCAGGTTTGGCGAACCAACCCGATCAAGGCCGGTCAACAACTGCACGTT
CAATCAGGCGGTGACGCATC

Downstream 100 bases:

>100_bases
AGTTCGCCCTTCTCCACTTCCGGATGTTCACTGGAACCCGTGCCGATCTTGCGGTGCGGGTTCTCAATTTTCACCGAAGG
GAATTGCGACGAAGCGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDNPFQIITDAFAPDYQINLSIQGLDGSIMLTLSNGGRIVAKRMISAEQRNDPKRLKRLVQSIQFGIAIEQGHSAMAILD
AMTRGDGITPPPRRAKHQPRPAAGL

Sequences:

>Translated_105_residues
MDNPFQIITDAFAPDYQINLSIQGLDGSIMLTLSNGGRIVAKRMISAEQRNDPKRLKRLVQSIQFGIAIEQGHSAMAILD
AMTRGDGITPPPRRAKHQPRPAAGL
>Mature_105_residues
MDNPFQIITDAFAPDYQINLSIQGLDGSIMLTLSNGGRIVAKRMISAEQRNDPKRLKRLVQSIQFGIAIEQGHSAMAILD
AMTRGDGITPPPRRAKHQPRPAAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11477; Mature: 11477

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNPFQIITDAFAPDYQINLSIQGLDGSIMLTLSNGGRIVAKRMISAEQRNDPKRLKRLV
CCCCHHEEECCCCCCEEEEEEEECCCCEEEEEECCCCEEEHHHHHHHHCCCCHHHHHHHH
QSIQFGIAIEQGHSAMAILDAMTRGDGITPPPRRAKHQPRPAAGL
HHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNPFQIITDAFAPDYQINLSIQGLDGSIMLTLSNGGRIVAKRMISAEQRNDPKRLKRLV
CCCCHHEEECCCCCCEEEEEEEECCCCEEEEEECCCCEEEHHHHHHHHCCCCHHHHHHHH
QSIQFGIAIEQGHSAMAILDAMTRGDGITPPPRRAKHQPRPAAGL
HHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA