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The map label for this gene is kdsD [H]

Identifier: 77457089

GI number: 77457089

Start: 1009515

End: 1010489

Strand: Reverse

Name: kdsD [H]

Synonym: Pfl01_0862

Alternate gene names: 77457089

Gene position: 1010489-1009515 (Counterclockwise)

Preceding gene: 77457100

Following gene: 77457088

Centisome position: 15.69

GC content: 63.18

Gene sequence:

>975_bases
ATGAGCCAAACCAGCGACCTGATTCAATCGGCACAACGCACTATCCGCCTCGAAGTGGAAGCCGTACAAGGCTTGTTGCC
CCATATCGACGCCGATTTCGTACGCGCTTGCGAGATGATTCTGGCCAGCAAGGGCCGTGTTGTCGTGGTCGGCATGGGCA
AGTCCGGGCACATCGGCAACAAGATTGCCGCGACCCTGGCCAGCACCGGCACCCCGGCGTTCTTCGTACACCCGGCCGAG
GCGAGCCACGGCGACATGGGCATGATCACCCGTGACGACGTGATACTGGCCCTGTCGAACTCCGGCTCCACCAACGAAAT
CGTCACCCTGCTGCCACTGATCAAACGCCTGGGCATCCAGCTGATCAGCGTCACCGGCAACCCGCAATCGCCGCTGGCCA
AGGCCGCCGAGGTCAACCTCAACGTTCACGTCGAACACGAAGCCTGCCCGCTGAACCTGGCACCGACCTCCTCGACCACC
GCCGCGCTGGTCATGGGCGACGCCCTGGCCGTGGCGCTGCTGGAAGCGCGCGGTTTCACCGCCGAAGACTTCGCCTTTTC
CCACCCGGGCGGCGCACTGGGCCGACGCCTGCTGCTGAAAGTGGAAAATGTCATGCACGCCGGCCAGGAACTGCCGCAGG
TACAGCGCGGCACCCTGCTCAAGGACGCGCTGATGGAAATGACTCGCAAGGGTCTGGGCATGACCGTCATTCTTGAAGCG
GACGGCAAACTGGCCGGAATCTTCACTGACGGCGACCTGCGTCGCACCCTGGATCGCAGCATCGATATCCACAGCGCTAC
CATCGACCAGGTGATGACCGTGCACGGCAAGACCGCCCGCGCCGAGATGCTCGCCGCCGAAGCGCTGAAAATCATGGAAG
ACCACCGAATCAACGCGCTGGTTGTCGTGGATGAGGAGGATCGCCCGATCGGCGCCTTCAACCTCTCCGACCTGCTGCGC
GCAGGAGTGATGTAA

Upstream 100 bases:

>100_bases
TTTGGTAACGAGGAATGACAAAGCACGACGAACTTGCGTGAGGCTTTTCAACATAACCGCTATAATCGCCGCCTTTTCAT
CGGGCTATACGATTTCTGAC

Downstream 100 bases:

>100_bases
ATGAGCACCGATCTGCTGCAACGCGGCAAAGCCATCAAACTGGCGGTATTCGACGTCGACGGTGTTCTCACCGACGGGCG
CCTGTACTTCCTTGAAGACG

Product: KpsF/GutQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSQTSDLIQSAQRTIRLEVEAVQGLLPHIDADFVRACEMILASKGRVVVVGMGKSGHIGNKIAATLASTGTPAFFVHPAE
ASHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGIQLISVTGNPQSPLAKAAEVNLNVHVEHEACPLNLAPTSSTT
AALVMGDALAVALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHAGQELPQVQRGTLLKDALMEMTRKGLGMTVILEA
DGKLAGIFTDGDLRRTLDRSIDIHSATIDQVMTVHGKTARAEMLAAEALKIMEDHRINALVVVDEEDRPIGAFNLSDLLR
AGVM

Sequences:

>Translated_324_residues
MSQTSDLIQSAQRTIRLEVEAVQGLLPHIDADFVRACEMILASKGRVVVVGMGKSGHIGNKIAATLASTGTPAFFVHPAE
ASHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGIQLISVTGNPQSPLAKAAEVNLNVHVEHEACPLNLAPTSSTT
AALVMGDALAVALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHAGQELPQVQRGTLLKDALMEMTRKGLGMTVILEA
DGKLAGIFTDGDLRRTLDRSIDIHSATIDQVMTVHGKTARAEMLAAEALKIMEDHRINALVVVDEEDRPIGAFNLSDLLR
AGVM
>Mature_323_residues
SQTSDLIQSAQRTIRLEVEAVQGLLPHIDADFVRACEMILASKGRVVVVGMGKSGHIGNKIAATLASTGTPAFFVHPAEA
SHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGIQLISVTGNPQSPLAKAAEVNLNVHVEHEACPLNLAPTSSTTA
ALVMGDALAVALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHAGQELPQVQRGTLLKDALMEMTRKGLGMTVILEAD
GKLAGIFTDGDLRRTLDRSIDIHSATIDQVMTVHGKTARAEMLAAEALKIMEDHRINALVVVDEEDRPIGAFNLSDLLRA
GVM

Specific function: Catalyzes the interconversion of D-arabinose 5-phosphate and D-ribulose 5-phosphate [H]

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=319, Percent_Identity=56.1128526645768, Blast_Score=363, Evalue=1e-101,
Organism=Escherichia coli, GI87082151, Length=318, Percent_Identity=48.4276729559748, Blast_Score=294, Evalue=5e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: =5.3.1.13 [H]

Molecular weight: Translated: 34469; Mature: 34338

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTSDLIQSAQRTIRLEVEAVQGLLPHIDADFVRACEMILASKGRVVVVGMGKSGHIGN
CCCHHHHHHHHHHHEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
KIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGIQ
HHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCEE
LISVTGNPQSPLAKAAEVNLNVHVEHEACPLNLAPTSSTTAALVMGDALAVALLEARGFT
EEEECCCCCCCHHHHHEEEEEEEEECCCCCCEECCCCCCCEEEEHHHHHHHHHHHHCCCC
AEDFAFSHPGGALGRRLLLKVENVMHAGQELPQVQRGTLLKDALMEMTRKGLGMTVILEA
HHCCEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHCCCCEEEEEEC
DGKLAGIFTDGDLRRTLDRSIDIHSATIDQVMTVHGKTARAEMLAAEALKIMEDHRINAL
CCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEE
VVVDEEDRPIGAFNLSDLLRAGVM
EEECCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SQTSDLIQSAQRTIRLEVEAVQGLLPHIDADFVRACEMILASKGRVVVVGMGKSGHIGN
CCHHHHHHHHHHHEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
KIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGIQ
HHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCEE
LISVTGNPQSPLAKAAEVNLNVHVEHEACPLNLAPTSSTTAALVMGDALAVALLEARGFT
EEEECCCCCCCHHHHHEEEEEEEEECCCCCCEECCCCCCCEEEEHHHHHHHHHHHHCCCC
AEDFAFSHPGGALGRRLLLKVENVMHAGQELPQVQRGTLLKDALMEMTRKGLGMTVILEA
HHCCEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHCCCCEEEEEEC
DGKLAGIFTDGDLRRTLDRSIDIHSATIDQVMTVHGKTARAEMLAAEALKIMEDHRINAL
CCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEE
VVVDEEDRPIGAFNLSDLLRAGVM
EEECCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]