| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yjgA [C]
Identifier: 77457073
GI number: 77457073
Start: 997513
End: 998052
Strand: Reverse
Name: yjgA [C]
Synonym: Pfl01_0846
Alternate gene names: 77457073
Gene position: 998052-997513 (Counterclockwise)
Preceding gene: 77457080
Following gene: 77457064
Centisome position: 15.5
GC content: 58.52
Gene sequence:
>540_bases TTGCGGACTGCCACCATGGTTGATTCTTACGACGACTCCCTCGATACGGGAGAAAAAAGCAAATCCCAGGTCAAACGCGA GCTGCATGCTCTGGTTGACCTTGGCGAGCGCCTTACAACGCTCAAGCCCGACTTGCAGGCAAAACTGCCATTGACCGACG CCTTGCGCCGGGCCCTGGCCGATGCGCCCAAGCACACCGCGAACATCGCGCGTAAACGGCATTTGCAGTTCATCGGCAAA CTGATGCGCGATCAGGACACTGACGCCATTCTCACCTTGCTCGATCAACTCGATGCCTCTACCCGTCAGTACAACGAGCG TTTCCACAACCTCGAACGCTGGCGTGACCGCCTGATCGCCGGTGACGATGCCGTGCTGGAGAAATTCGTCGTCGATTACC CGGACGCCGACCGCCAGCAACTGCGTTCCCTGATCCGTCAGGCCCAGCACGAGGTTGCGCAAAACAAACCTCCTGCCTCG AGCCGCAAGATCTTCAAGTACATCCGTGAGCTGGACGAGACTCAACGCGGTCTGCGTTGA
Upstream 100 bases:
>100_bases CACTCATGCTCATCTCCACTCAAATTCTGCTTTCGGCTGGGGCCTTCGAGCGACCGGGCCGGACAAGCGGCCCCCGACTG GTTATCATGGCGGCGTTTCT
Downstream 100 bases:
>100_bases TATTCGTCACCGGGTGGCCGCACCGCGCGCCACCCGAAGCTCCATCCCTTCTTACGCGCCCGTGCCACCCACGGTGATCG CATCGATTTTCAGCGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MRTATMVDSYDDSLDTGEKSKSQVKRELHALVDLGERLTTLKPDLQAKLPLTDALRRALADAPKHTANIARKRHLQFIGK LMRDQDTDAILTLLDQLDASTRQYNERFHNLERWRDRLIAGDDAVLEKFVVDYPDADRQQLRSLIRQAQHEVAQNKPPAS SRKIFKYIRELDETQRGLR
Sequences:
>Translated_179_residues MRTATMVDSYDDSLDTGEKSKSQVKRELHALVDLGERLTTLKPDLQAKLPLTDALRRALADAPKHTANIARKRHLQFIGK LMRDQDTDAILTLLDQLDASTRQYNERFHNLERWRDRLIAGDDAVLEKFVVDYPDADRQQLRSLIRQAQHEVAQNKPPAS SRKIFKYIRELDETQRGLR >Mature_179_residues MRTATMVDSYDDSLDTGEKSKSQVKRELHALVDLGERLTTLKPDLQAKLPLTDALRRALADAPKHTANIARKRHLQFIGK LMRDQDTDAILTLLDQLDASTRQYNERFHNLERWRDRLIAGDDAVLEKFVVDYPDADRQQLRSLIRQAQHEVAQNKPPAS SRKIFKYIRELDETQRGLR
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=157, Percent_Identity=45.2229299363057, Blast_Score=114, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 20732; Mature: 20732
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTATMVDSYDDSLDTGEKSKSQVKRELHALVDLGERLTTLKPDLQAKLPLTDALRRALA CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH DAPKHTANIARKRHLQFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERWRDRLIA HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDDAVLEKFVVDYPDADRQQLRSLIRQAQHEVAQNKPPASSRKIFKYIRELDETQRGLR CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTATMVDSYDDSLDTGEKSKSQVKRELHALVDLGERLTTLKPDLQAKLPLTDALRRALA CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH DAPKHTANIARKRHLQFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERWRDRLIA HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDDAVLEKFVVDYPDADRQQLRSLIRQAQHEVAQNKPPASSRKIFKYIRELDETQRGLR CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA