Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457053
Identifier: 77457053
GI number: 77457053
Start: 972799
End: 974112
Strand: Reverse
Name: 77457053
Synonym: Pfl01_0826
Alternate gene names: NA
Gene position: 974112-972799 (Counterclockwise)
Preceding gene: 77457059
Following gene: 77457052
Centisome position: 15.13
GC content: 58.68
Gene sequence:
>1314_bases ATGTCAGATCCACAAAACGATCCACAACAACCGCCGGTCCCGCTCATTGCCCGGTTCGAGGAGTTGTTTAGCGAAACGGG GATCGAGATCGACGGCGAACAGTCTCACCTCATATTGCTGGCGACCGATTCGCACATCGAGCCCCCGCCTCCCAACCCGG GTAAACCAAGGGCAAGCAAAGGGATCGGGCTGTATTACGAAATACTTGAACACACGGCCATCGGCGACAATGTGCTGCTG CGTCAGGACACAACAACGCCACCAAGACCGGCCAGCAAGGTTCCCCTGCATCTGCCCAATGGATTGGCACTGACCTACGG TCAGATATTGGGCTTGGGTGGCGATTTCTATGGGATCCCCGAGCAACCGATCTGCGACGGCGCGACAGCCGCCGAGCGCC TTCAGCGCTTTACTGCTGCGTTCAATTCCCTGGCAACCGCATTTTCTGCGAAAGCTGAGGCAGGCAAGATTCTTGAGGTC GCCAAACAAGAGGCTGCGGCGGTCGAACAAGCCATCCACGAGGGCAAGCCCGCGCATGAGGCGTACGAGAAACTGGGTGA TACGTTGTCCGAAGAGTGGAATAAAATCACCGGCGGCGGAAGTTTTGTCTCCGCCCTGTTTCCACTGGGTCGCTATCTGA AACTCGCGGCCAACAACCCCGACCATTTTGGCAAATGGGCAAAACGCGCCTATATCGCCGGCCACTCGGCAGCACTCAAA AAGGCCGTCGCCGCCCATGGGACGCAGGACACCGCGGCCCTGGAACTGGCCTACGCCATGAATGCCTTCGCCGATCATTT CCTCACCGACCTGTTTGCCTCCGGTCACCTGCGCGTTCCGCGCCGTGAGCTGGCGGCGGTGGTGACACCCGGCGATCTGG GTTCGCTGATTTCTCGTTTCATGCACGACGAAGACAACCAGTTTGGCCTCAAGGTGCGCAACAGCCTGAGCGAGCACTGG CGCACTTTTGGCGACAAACGCTACTTCGACCTCATCCCTGACGAGGAACAGTTCGCCAACCAGTCCCATGTCAAACAGGC TACCCAGGCCTCCGCCGACGAAGTGTTCGACGCCTACCTCAGTGGCAAGCGCCCTGATGAGTCCGATTTCGCCGCGCTGA AGCACCTGCCGGATCTCGATGATGTGCACAAAGTGGAGAACAACTTCTCACCACTGTTCCGCGTCCAGGGCAACAAAGTC CTGCGGCGCAAGGACGTCAACAACCTCAACGACACCGCCACCGTCGACGACTGGTGGGGCTGGAGCACTTACCTGCTGCT CAAGGACTATCACCCAGCCGGCAATACGAATTAA
Upstream 100 bases:
>100_bases TCTGCTTACCTTGACGTAGGAAACTTCTGGGCTAGGCTGCCGATTACTGTATATAAATACAGTTAAATATTTTTACGGAT GGCATATCAAGGAGCAAGAA
Downstream 100 bases:
>100_bases GGAGCGATTCGATGAGCATCAAATTGAAACTGGAACTGGCCTCGGGCCAATCGTTGAAAGGTGCGCCGCTGCAATTGCTG CGCGACGGTGTGGCCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phospholipase C; Phosphatidylcholine Hydrolyzing Phospholipase
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MSDPQNDPQQPPVPLIARFEELFSETGIEIDGEQSHLILLATDSHIEPPPPNPGKPRASKGIGLYYEILEHTAIGDNVLL RQDTTTPPRPASKVPLHLPNGLALTYGQILGLGGDFYGIPEQPICDGATAAERLQRFTAAFNSLATAFSAKAEAGKILEV AKQEAAAVEQAIHEGKPAHEAYEKLGDTLSEEWNKITGGGSFVSALFPLGRYLKLAANNPDHFGKWAKRAYIAGHSAALK KAVAAHGTQDTAALELAYAMNAFADHFLTDLFASGHLRVPRRELAAVVTPGDLGSLISRFMHDEDNQFGLKVRNSLSEHW RTFGDKRYFDLIPDEEQFANQSHVKQATQASADEVFDAYLSGKRPDESDFAALKHLPDLDDVHKVENNFSPLFRVQGNKV LRRKDVNNLNDTATVDDWWGWSTYLLLKDYHPAGNTN
Sequences:
>Translated_437_residues MSDPQNDPQQPPVPLIARFEELFSETGIEIDGEQSHLILLATDSHIEPPPPNPGKPRASKGIGLYYEILEHTAIGDNVLL RQDTTTPPRPASKVPLHLPNGLALTYGQILGLGGDFYGIPEQPICDGATAAERLQRFTAAFNSLATAFSAKAEAGKILEV AKQEAAAVEQAIHEGKPAHEAYEKLGDTLSEEWNKITGGGSFVSALFPLGRYLKLAANNPDHFGKWAKRAYIAGHSAALK KAVAAHGTQDTAALELAYAMNAFADHFLTDLFASGHLRVPRRELAAVVTPGDLGSLISRFMHDEDNQFGLKVRNSLSEHW RTFGDKRYFDLIPDEEQFANQSHVKQATQASADEVFDAYLSGKRPDESDFAALKHLPDLDDVHKVENNFSPLFRVQGNKV LRRKDVNNLNDTATVDDWWGWSTYLLLKDYHPAGNTN >Mature_436_residues SDPQNDPQQPPVPLIARFEELFSETGIEIDGEQSHLILLATDSHIEPPPPNPGKPRASKGIGLYYEILEHTAIGDNVLLR QDTTTPPRPASKVPLHLPNGLALTYGQILGLGGDFYGIPEQPICDGATAAERLQRFTAAFNSLATAFSAKAEAGKILEVA KQEAAAVEQAIHEGKPAHEAYEKLGDTLSEEWNKITGGGSFVSALFPLGRYLKLAANNPDHFGKWAKRAYIAGHSAALKK AVAAHGTQDTAALELAYAMNAFADHFLTDLFASGHLRVPRRELAAVVTPGDLGSLISRFMHDEDNQFGLKVRNSLSEHWR TFGDKRYFDLIPDEEQFANQSHVKQATQASADEVFDAYLSGKRPDESDFAALKHLPDLDDVHKVENNFSPLFRVQGNKVL RRKDVNNLNDTATVDDWWGWSTYLLLKDYHPAGNTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48052; Mature: 47921
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPQNDPQQPPVPLIARFEELFSETGIEIDGEQSHLILLATDSHIEPPPPNPGKPRASK CCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCC GIGLYYEILEHTAIGDNVLLRQDTTTPPRPASKVPLHLPNGLALTYGQILGLGGDFYGIP CCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCC EQPICDGATAAERLQRFTAAFNSLATAFSAKAEAGKILEVAKQEAAAVEQAIHEGKPAHE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AYEKLGDTLSEEWNKITGGGSFVSALFPLGRYLKLAANNPDHFGKWAKRAYIAGHSAALK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHHHH KAVAAHGTQDTAALELAYAMNAFADHFLTDLFASGHLRVPRRELAAVVTPGDLGSLISRF HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCHHHHHHHHH MHDEDNQFGLKVRNSLSEHWRTFGDKRYFDLIPDEEQFANQSHVKQATQASADEVFDAYL HCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH SGKRPDESDFAALKHLPDLDDVHKVENNFSPLFRVQGNKVLRRKDVNNLNDTATVDDWWG CCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCC WSTYLLLKDYHPAGNTN CEEEEEEEECCCCCCCC >Mature Secondary Structure SDPQNDPQQPPVPLIARFEELFSETGIEIDGEQSHLILLATDSHIEPPPPNPGKPRASK CCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCC GIGLYYEILEHTAIGDNVLLRQDTTTPPRPASKVPLHLPNGLALTYGQILGLGGDFYGIP CCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCC EQPICDGATAAERLQRFTAAFNSLATAFSAKAEAGKILEVAKQEAAAVEQAIHEGKPAHE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AYEKLGDTLSEEWNKITGGGSFVSALFPLGRYLKLAANNPDHFGKWAKRAYIAGHSAALK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHHHH KAVAAHGTQDTAALELAYAMNAFADHFLTDLFASGHLRVPRRELAAVVTPGDLGSLISRF HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCHHHHHHHHH MHDEDNQFGLKVRNSLSEHWRTFGDKRYFDLIPDEEQFANQSHVKQATQASADEVFDAYL HCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH SGKRPDESDFAALKHLPDLDDVHKVENNFSPLFRVQGNKVLRRKDVNNLNDTATVDDWWG CCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCC WSTYLLLKDYHPAGNTN CEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA