| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ykgG [C]
Identifier: 77456977
GI number: 77456977
Start: 882544
End: 883215
Strand: Reverse
Name: ykgG [C]
Synonym: Pfl01_0750
Alternate gene names: 77456977
Gene position: 883215-882544 (Counterclockwise)
Preceding gene: 77456978
Following gene: 77456976
Centisome position: 13.72
GC content: 61.61
Gene sequence:
>672_bases ATGAGCGCCAAACAAAACATCCTCGGCAAGTTACGGAAGAGTCTGACCGGCACCACACCGATTGCCGACAACTTTGACGT CGATCTGGTGACCCAGCCTTACACCTACAGCGCCGAACAACGGATCCCGCAACTGCGCAAACTGATGGAAGCGGTGCACA CCGAAATCCACCTGACTTCCGCTGATGGGTGGCCGGCGCTGCTGGCGCAATTGCTGCGCGACCGCCAATTGCCGAGCCTG CTGATCGCACCGACTACACCTCACGGGCAGCGCATCACACAGCACTGGGCGAACAATCCTGATCTACCGGCGCTGAAGTC CTACGACCGGCCGATGGAAGAGTGGAAAGCCGAGTTGTTCAACGACACCCCGGCCAGCCTCACCGGCACCCTCGGCGCCA TCGCCGCCACCGGCAGCCTGATTCTCTGGCCGACCCGCGAAGAACCGCGGCTGATGAGCCTGGTACCGCCAGTGCATTTC GCCCTGCTCAAGGCCAGCCAGATCCGCGACAACTTCTATCAGGTGCAGCAGGAATTCGAGTGGGCCCAAGGCATGCCGAC CAACGCGCTGCTGGTGTCCGGCCCGTCGAAAACCGCCGACATCGAACAAGTCCTGGCTTACGGCGCCCACGGCCCGAAAG ATCTGGTGGTGTTGATCCTGGAGGACCAATGA
Upstream 100 bases:
>100_bases ATGTCGGGCCGTGGACGCAGAACCACAGCGCACCGAAACCCGCCGCCCGCTCACTGCATGACATGGCTCGCGAACACCTG GCCAAACGAGGAGACCGTTG
Downstream 100 bases:
>100_bases CCTTACCGGCGACTTTCCTGCGCGATGCGCAGCAATTGATTCCTGCCGAACGGCGTTTCGACGATCCGCTGTCGACCCTG GCCTTCGGCACCGATGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSAKQNILGKLRKSLTGTTPIADNFDVDLVTQPYTYSAEQRIPQLRKLMEAVHTEIHLTSADGWPALLAQLLRDRQLPSL LIAPTTPHGQRITQHWANNPDLPALKSYDRPMEEWKAELFNDTPASLTGTLGAIAATGSLILWPTREEPRLMSLVPPVHF ALLKASQIRDNFYQVQQEFEWAQGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLVVLILEDQ
Sequences:
>Translated_223_residues MSAKQNILGKLRKSLTGTTPIADNFDVDLVTQPYTYSAEQRIPQLRKLMEAVHTEIHLTSADGWPALLAQLLRDRQLPSL LIAPTTPHGQRITQHWANNPDLPALKSYDRPMEEWKAELFNDTPASLTGTLGAIAATGSLILWPTREEPRLMSLVPPVHF ALLKASQIRDNFYQVQQEFEWAQGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLVVLILEDQ >Mature_222_residues SAKQNILGKLRKSLTGTTPIADNFDVDLVTQPYTYSAEQRIPQLRKLMEAVHTEIHLTSADGWPALLAQLLRDRQLPSLL IAPTTPHGQRITQHWANNPDLPALKSYDRPMEEWKAELFNDTPASLTGTLGAIAATGSLILWPTREEPRLMSLVPPVHFA LLKASQIRDNFYQVQQEFEWAQGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLVVLILEDQ
Specific function: Unknown
COG id: COG1556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutC/ykgG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003741 - InterPro: IPR002698 [H]
Pfam domain/function: PF02589 DUF162 [H]
EC number: NA
Molecular weight: Translated: 24794; Mature: 24662
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKQNILGKLRKSLTGTTPIADNFDVDLVTQPYTYSAEQRIPQLRKLMEAVHTEIHLTS CCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEC ADGWPALLAQLLRDRQLPSLLIAPTTPHGQRITQHWANNPDLPALKSYDRPMEEWKAELF CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHH NDTPASLTGTLGAIAATGSLILWPTREEPRLMSLVPPVHFALLKASQIRDNFYQVQQEFE CCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WAQGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLVVLILEDQ HHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECC >Mature Secondary Structure SAKQNILGKLRKSLTGTTPIADNFDVDLVTQPYTYSAEQRIPQLRKLMEAVHTEIHLTS CHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEC ADGWPALLAQLLRDRQLPSLLIAPTTPHGQRITQHWANNPDLPALKSYDRPMEEWKAELF CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHH NDTPASLTGTLGAIAATGSLILWPTREEPRLMSLVPPVHFALLKASQIRDNFYQVQQEFE CCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WAQGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLVVLILEDQ HHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]