| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rimJ [H]
Identifier: 77456960
GI number: 77456960
Start: 860485
End: 861072
Strand: Reverse
Name: rimJ [H]
Synonym: Pfl01_0732
Alternate gene names: 77456960
Gene position: 861072-860485 (Counterclockwise)
Preceding gene: 77456962
Following gene: 77456959
Centisome position: 13.37
GC content: 62.07
Gene sequence:
>588_bases ATGCCGCTGCTGACCCTGCCCTGTCAACGCCTGACGCTCGCGGTGCTCGACCCGGATCAGGCGCCGCTGGAAAGCGCGTT CTACCAGCGCAATCAACGCCACCTCGCGCCGTGGTCACCGATTCGCACCACCGACTATTTCTCCACCGAACAGATCCGCC GACGCCTTGAAATACAGGCCAGCGCCTTCGAAGCCGGGCTCGCGGTGCATATGGCGTTGTTGACTCCGGATGGTGAGCAG ATGATCGGCGCCTGCAATTTCAGCGGGATCATTCGCGGTGCGTTTCAAGCGTGTTATCTGGGTTATCACATCGACGAGGC GCATCAGGGCAAGGGGTTGATGCAGGAAGCGCTGGAGGCGGCCATCGCCTATATGTTCGACACTCAGAACCTGCACCGGA TCATGGCCAACTACATTCCCGGCAATGAGCGCAGCGCCCGGTTGCTGGAGCGCCTCGGGTTCGAGCGTGAAGGCTATGCC AAGGCGTACCTGAACATCGCCGGGCGCTGGCAGGATCATGTGCTGACGGCGCGGGTCAATCCGCGTTTCGAAACGTCGGA GCAACGCTGGTCGCGGCCGCTGTCCTGA
Upstream 100 bases:
>100_bases GAATCAGGGAAATTTATAGGGCTCTGCGTTCGGCGATCCAGTTGTGTTTTCCGTCCGGCCGGACAATTCTGTCAATCATT CCCTGCTTCCGGAGCACCCG
Downstream 100 bases:
>100_bases CGTTCACAAATTATTAAGGATTGGCCGCGTAAGCTCGGGTTTCCGCTCACTTCCGGTTGCCTGAACCCATGTCGCGTGCC GCCTCTTCCCTGCTTCTGCT
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S5 [H]
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MPLLTLPCQRLTLAVLDPDQAPLESAFYQRNQRHLAPWSPIRTTDYFSTEQIRRRLEIQASAFEAGLAVHMALLTPDGEQ MIGACNFSGIIRGAFQACYLGYHIDEAHQGKGLMQEALEAAIAYMFDTQNLHRIMANYIPGNERSARLLERLGFEREGYA KAYLNIAGRWQDHVLTARVNPRFETSEQRWSRPLS
Sequences:
>Translated_195_residues MPLLTLPCQRLTLAVLDPDQAPLESAFYQRNQRHLAPWSPIRTTDYFSTEQIRRRLEIQASAFEAGLAVHMALLTPDGEQ MIGACNFSGIIRGAFQACYLGYHIDEAHQGKGLMQEALEAAIAYMFDTQNLHRIMANYIPGNERSARLLERLGFEREGYA KAYLNIAGRWQDHVLTARVNPRFETSEQRWSRPLS >Mature_194_residues PLLTLPCQRLTLAVLDPDQAPLESAFYQRNQRHLAPWSPIRTTDYFSTEQIRRRLEIQASAFEAGLAVHMALLTPDGEQM IGACNFSGIIRGAFQACYLGYHIDEAHQGKGLMQEALEAAIAYMFDTQNLHRIMANYIPGNERSARLLERLGFEREGYAK AYLNIAGRWQDHVLTARVNPRFETSEQRWSRPLS
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5. Plays also a role in the temperature regulation of pap pilin transcription [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787305, Length=181, Percent_Identity=46.9613259668508, Blast_Score=170, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 22240; Mature: 22108
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLTLPCQRLTLAVLDPDQAPLESAFYQRNQRHLAPWSPIRTTDYFSTEQIRRRLEIQA CCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SAFEAGLAVHMALLTPDGEQMIGACNFSGIIRGAFQACYLGYHIDEAHQGKGLMQEALEA HHHHHHHHEEEEEECCCCHHHEEECCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH AIAYMFDTQNLHRIMANYIPGNERSARLLERLGFEREGYAKAYLNIAGRWQDHVLTARVN HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECC PRFETSEQRWSRPLS CCCCCCHHHCCCCCC >Mature Secondary Structure PLLTLPCQRLTLAVLDPDQAPLESAFYQRNQRHLAPWSPIRTTDYFSTEQIRRRLEIQA CCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SAFEAGLAVHMALLTPDGEQMIGACNFSGIIRGAFQACYLGYHIDEAHQGKGLMQEALEA HHHHHHHHEEEEEECCCCHHHEEECCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH AIAYMFDTQNLHRIMANYIPGNERSARLLERLGFEREGYAKAYLNIAGRWQDHVLTARVN HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECC PRFETSEQRWSRPLS CCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]