| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456866
Identifier: 77456866
GI number: 77456866
Start: 750664
End: 751104
Strand: Reverse
Name: 77456866
Synonym: Pfl01_0638
Alternate gene names: NA
Gene position: 751104-750664 (Counterclockwise)
Preceding gene: 77456869
Following gene: 77456865
Centisome position: 11.67
GC content: 61.22
Gene sequence:
>441_bases ATGAAAACCGGCCTCCCCCGCAAGCAAAAAGGCGCCGCCGCCATCGAATTCGCCTTGGTCTTCGTCATCTTCTTTGCCGT GTTTTACGGGATTGTGAGCTACAGCCTGCCGATGTTGCTGATGCAGGCCTTTACCCAGTCGACGTCCGAAGCAGTGCGGC GTGGCGTGGCACTGGATCCGGCGACCGCCAACTACGCGACCGCGATCCAGAACGTGGCACGCGCCGAACTGACGCGACGC CTGGCGTGGCTACCGTCAGCACTGAACTTCAACGCGGCCACCGACGCCACGATCACCTACGTGGGCGGCCTGCTGACCGT GACCATCAACTACCCGACCAACAAGCTCAATCAGGCGTTACCGTTTCTGGTCTTGCCCGGTATCGGGGCGGTACCCAATC TACCGGCCAACCTGACCGCCAGCTCGAGCCTGCAATTTTGA
Upstream 100 bases:
>100_bases AGATCAGTAGGACAAAGCTGTGCATCCGGTAAAAATCGTCCGTTTTGGCTGAATGATTCTATGCTGATACTACGTAGTGA CTGTCAGGGTAGACGCACTC
Downstream 100 bases:
>100_bases GTTCCGGTGACAAGCTGTTCGACCGCCTGCTCAATCGTCAAACGTCCACACCGCCAGCGGTCATGGACGACCCCGTGGTG CCCGGCGTCGGTTTGCAGCT
Product: TadE-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKTGLPRKQKGAAAIEFALVFVIFFAVFYGIVSYSLPMLLMQAFTQSTSEAVRRGVALDPATANYATAIQNVARAELTRR LAWLPSALNFNAATDATITYVGGLLTVTINYPTNKLNQALPFLVLPGIGAVPNLPANLTASSSLQF
Sequences:
>Translated_146_residues MKTGLPRKQKGAAAIEFALVFVIFFAVFYGIVSYSLPMLLMQAFTQSTSEAVRRGVALDPATANYATAIQNVARAELTRR LAWLPSALNFNAATDATITYVGGLLTVTINYPTNKLNQALPFLVLPGIGAVPNLPANLTASSSLQF >Mature_146_residues MKTGLPRKQKGAAAIEFALVFVIFFAVFYGIVSYSLPMLLMQAFTQSTSEAVRRGVALDPATANYATAIQNVARAELTRR LAWLPSALNFNAATDATITYVGGLLTVTINYPTNKLNQALPFLVLPGIGAVPNLPANLTASSSLQF
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15610; Mature: 15610
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGLPRKQKGAAAIEFALVFVIFFAVFYGIVSYSLPMLLMQAFTQSTSEAVRRGVALDP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ATANYATAIQNVARAELTRRLAWLPSALNFNAATDATITYVGGLLTVTINYPTNKLNQAL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCEEEEEEECCHHHHHHHC PFLVLPGIGAVPNLPANLTASSSLQF CEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTGLPRKQKGAAAIEFALVFVIFFAVFYGIVSYSLPMLLMQAFTQSTSEAVRRGVALDP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ATANYATAIQNVARAELTRRLAWLPSALNFNAATDATITYVGGLLTVTINYPTNKLNQAL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCEEEEEEECCHHHHHHHC PFLVLPGIGAVPNLPANLTASSSLQF CEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA