Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77456700
Identifier: 77456700
GI number: 77456700
Start: 546522
End: 546893
Strand: Direct
Name: 77456700
Synonym: Pfl01_0472
Alternate gene names: NA
Gene position: 546522-546893 (Clockwise)
Preceding gene: 77456699
Following gene: 77456701
Centisome position: 8.49
GC content: 60.75
Gene sequence:
>372_bases ATGCTAGTTTGCCCCGACGTTCCCGGAGGGCAAATCTTGACCATCAAAAACGCTATCGCCATCGGCGCATTTTCCCTGGC ACTGTCCGGCTGCGGCACCGCCGTCACGGTCTTGCAGGGCGATGAAGCCGCCACGCGCGGCCTGCGCAAACAGAAGACCT ACTGTCAGTCGATTCCGCGCATCTACAGCGGACTCGCCCATGATTTCTGCCTGCTGCACGCGCCGCCCGATCCTACCGGC ATTCTGGTACCGGTCGTCCTGCTCGACCTGACCCTGTCCGGTGTGTTCGACACGGCTTTCCTGCCGTATACGATCTATCG CCAGGCGGTGGACGGGAATATCAGTGTTTATTGGCGGCCAAGCCGTGGATAG
Upstream 100 bases:
>100_bases ATTTCTGCTGTTGAAATCGGGTGAGGGTTGTAGCGACAAATCCTTGTGACTTGTCCTACGGCCTTTCCGGAACCCATGAA CTGCCCCCCGCAAAACCCCG
Downstream 100 bases:
>100_bases GCCCATGGACAAGGGTTCTGTGGGTTGAACGACATGGGGCAATTCGCACAGGGTCATTCCCGCCACGTTTACGCTATAAT CCCGCCCTTTAGCTGTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLVCPDVPGGQILTIKNAIAIGAFSLALSGCGTAVTVLQGDEAATRGLRKQKTYCQSIPRIYSGLAHDFCLLHAPPDPTG ILVPVVLLDLTLSGVFDTAFLPYTIYRQAVDGNISVYWRPSRG
Sequences:
>Translated_123_residues MLVCPDVPGGQILTIKNAIAIGAFSLALSGCGTAVTVLQGDEAATRGLRKQKTYCQSIPRIYSGLAHDFCLLHAPPDPTG ILVPVVLLDLTLSGVFDTAFLPYTIYRQAVDGNISVYWRPSRG >Mature_123_residues MLVCPDVPGGQILTIKNAIAIGAFSLALSGCGTAVTVLQGDEAATRGLRKQKTYCQSIPRIYSGLAHDFCLLHAPPDPTG ILVPVVLLDLTLSGVFDTAFLPYTIYRQAVDGNISVYWRPSRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13119; Mature: 13119
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVCPDVPGGQILTIKNAIAIGAFSLALSGCGTAVTVLQGDEAATRGLRKQKTYCQSIPR CEECCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH IYSGLAHDFCLLHAPPDPTGILVPVVLLDLTLSGVFDTAFLPYTIYRQAVDGNISVYWRP HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC SRG CCC >Mature Secondary Structure MLVCPDVPGGQILTIKNAIAIGAFSLALSGCGTAVTVLQGDEAATRGLRKQKTYCQSIPR CEECCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH IYSGLAHDFCLLHAPPDPTGILVPVVLLDLTLSGVFDTAFLPYTIYRQAVDGNISVYWRP HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC SRG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA