Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77456617
Identifier: 77456617
GI number: 77456617
Start: 442050
End: 442472
Strand: Direct
Name: 77456617
Synonym: Pfl01_0389
Alternate gene names: NA
Gene position: 442050-442472 (Clockwise)
Preceding gene: 77456616
Following gene: 77456618
Centisome position: 6.87
GC content: 52.72
Gene sequence:
>423_bases ATGGCCAAAGTCATTTTGAAGAAAAAAATCGACGCTTCGACTTCCGCTCTGAGCGACGTCAAATCCTATGCCCGCAAGAT CTGGCTGGCAGGCCTGGGGGCCTACACCAAGGTCGGTCAGGAGGGCAGCGAGTACTTTCAGGAGTTGATCAAGGCTGGTC AAACTGTTGAAAAGAAAGGCAAAAAAGCCGTCACCGAAAAACTCGAAGCAGCCAACGCCGAGATCGATGAAGCCAAGAGC GAAGTCAGCTCTTTCAAAGGCCGGGTCGAAGTTCAGCTGGACAAGGTCGAGAAGGCCTTCGACACACGTGTCGCCAGTGC CTTGAATCGTATCGGCATTCCGTCTAAACATGACGTTGAGGCACTCTCTGCTAAGCTCGATGAGCTGACGGCATTGCTCG AACGCGTCGCGCGTAAATCTTAA
Upstream 100 bases:
>100_bases CAGTTGTTAGGGTGCCGTTTCTAATTTTTCTCCCTACTTTGTGCCTGAGCCCGACACTCGTCAGGGCAGTTCCTCAAACC TTCTGCGCGTGAGGTGCACC
Downstream 100 bases:
>100_bases GGAGAACGGGATGGCTGGTAAAAAGAACACCGATAAAGAAGGCAGCTCGTGGATCGGAAAAGTCGAAGACTATTCCCGCA AGATCTGGCTGGCTGGTTTA
Product: Poly granule associated
Products: NA
Alternate protein names: Polyhydroxyalkanoate Granule-Associated Protein PhaI; Poly(Hydroxyalcanoate) Granule Associated Protein; Polyhydroxyalkanoate Synthesis Protein PhaF; Polyhydroxyalkanoate Biosynthesis-Like Protein; Poly Granule Associated Protein; Poly Granule Associated Family Protein; Polyhydroxyalkanoate Granule-Associated Protein PhaF; Transcriptional Regulatory Protein; Polygranule-Associated Protein
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAKVILKKKIDASTSALSDVKSYARKIWLAGLGAYTKVGQEGSEYFQELIKAGQTVEKKGKKAVTEKLEAANAEIDEAKS EVSSFKGRVEVQLDKVEKAFDTRVASALNRIGIPSKHDVEALSAKLDELTALLERVARKS
Sequences:
>Translated_140_residues MAKVILKKKIDASTSALSDVKSYARKIWLAGLGAYTKVGQEGSEYFQELIKAGQTVEKKGKKAVTEKLEAANAEIDEAKS EVSSFKGRVEVQLDKVEKAFDTRVASALNRIGIPSKHDVEALSAKLDELTALLERVARKS >Mature_139_residues AKVILKKKIDASTSALSDVKSYARKIWLAGLGAYTKVGQEGSEYFQELIKAGQTVEKKGKKAVTEKLEAANAEIDEAKSE VSSFKGRVEVQLDKVEKAFDTRVASALNRIGIPSKHDVEALSAKLDELTALLERVARKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15267; Mature: 15135
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVILKKKIDASTSALSDVKSYARKIWLAGLGAYTKVGQEGSEYFQELIKAGQTVEKKG CCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH KKAVTEKLEAANAEIDEAKSEVSSFKGRVEVQLDKVEKAFDTRVASALNRIGIPSKHDVE HHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ALSAKLDELTALLERVARKS HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKVILKKKIDASTSALSDVKSYARKIWLAGLGAYTKVGQEGSEYFQELIKAGQTVEKKG CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH KKAVTEKLEAANAEIDEAKSEVSSFKGRVEVQLDKVEKAFDTRVASALNRIGIPSKHDVE HHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ALSAKLDELTALLERVARKS HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA