Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is pip [H]
Identifier: 77456599
GI number: 77456599
Start: 423951
End: 424922
Strand: Direct
Name: pip [H]
Synonym: Pfl01_0371
Alternate gene names: 77456599
Gene position: 423951-424922 (Clockwise)
Preceding gene: 77456598
Following gene: 77456600
Centisome position: 6.58
GC content: 63.99
Gene sequence:
>972_bases ATGCAGACTTTGTTTCCGCAGATCAAACCTCACGCACGGCACGATCTGGCCGTCGATGACACCCATACGCTGTACGTCGA CGAAAGCGGTTCACCGGAGGGTTTGCCGGTGGTGTTCATCCACGGAGGTCCCGGCGCCGGGTGCGACGCCCAGAGTCGCC GTTACTTCGATCCGAATCTGTATCGCATTGTCACCTTCGACCAGCGCGGCTGCGGTCGCTCCACGCCCCACGCCAGTCTG GAAAACAACACCACCTGGGATCTGGTCGAAGACCTCGAGCGCATCCGTAAACATCTGGGCATCGACAAATGGGTGCTGTT CGGCGGTTCCTGGGGTTCGACCCTGGCGCTGGCCTACGCGCAGACCCATCCGGAGCGCGTACATGGCCTGATCCTGCGCG GGATCTTTCTCTGCCGTCCGCAGGAAATCGAATGGTTCTACCAGGCCGGCGCCAGCCGTCTGTTCCCCGATTACTGGCAG GACTACCTCGCGCCGATTCCGCTGGACGAGCGCGACGACCTGCTCAGCGCGTTCCACAAACGCCTGACCGGCAACGACCA GATCGCCCAGATGCACGCGGCCAAGGCCTGGTCGACCTGGGAAGGGCGCACCGCGACCCTGCGGCCGAATCCGCTGGTGG TCGACCGTTTCTCCGAGCCGCAGCGCGCCTTGTCGATCGCGCGGATCGAATGCCACTACTTCACCAACAATGCGTTCCTT GAGCCGAACCAGCTGATCCGCGACATGGGCAAGATCGCCCATCTGCCGGGCGTGATCATCCACGGCCGCTACGACGTGAT CTGCCCGCTCGACAACGCCTGGGAACTGCATCAGGCCTGGCCGAACAGCGAGCTGCAGGTGATCCGCGATGCCGGCCACG CCGCGTCCGAACCGGGCATCACCGATGCACTGGTGCGCGCCGCCAGCAAAATGGCCCGTCGTCTGCTCGACCTGCCGCCC GAAGAAGCATGA
Upstream 100 bases:
>100_bases GCACGGGCATGCTCATTGACGTAAATCGGGTTTATGATGCCGAACGGCAGAATAATAGAAGTCCCCCCAGGGATGACCTC GACCCCTTACGGAGCGCGCA
Downstream 100 bases:
>100_bases AGGGTCTGTTGCAGCGCGTGAAAGGCGCGCGGGTCGAAGTGGCGGGCGAGGTGGTTGGCAGTGTCGATCAGGGTTTGCTG GTGCTGGTGGCGGTAGAACC
Product: prolyl aminopeptidase
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MQTLFPQIKPHARHDLAVDDTHTLYVDESGSPEGLPVVFIHGGPGAGCDAQSRRYFDPNLYRIVTFDQRGCGRSTPHASL ENNTTWDLVEDLERIRKHLGIDKWVLFGGSWGSTLALAYAQTHPERVHGLILRGIFLCRPQEIEWFYQAGASRLFPDYWQ DYLAPIPLDERDDLLSAFHKRLTGNDQIAQMHAAKAWSTWEGRTATLRPNPLVVDRFSEPQRALSIARIECHYFTNNAFL EPNQLIRDMGKIAHLPGVIIHGRYDVICPLDNAWELHQAWPNSELQVIRDAGHAASEPGITDALVRAASKMARRLLDLPP EEA
Sequences:
>Translated_323_residues MQTLFPQIKPHARHDLAVDDTHTLYVDESGSPEGLPVVFIHGGPGAGCDAQSRRYFDPNLYRIVTFDQRGCGRSTPHASL ENNTTWDLVEDLERIRKHLGIDKWVLFGGSWGSTLALAYAQTHPERVHGLILRGIFLCRPQEIEWFYQAGASRLFPDYWQ DYLAPIPLDERDDLLSAFHKRLTGNDQIAQMHAAKAWSTWEGRTATLRPNPLVVDRFSEPQRALSIARIECHYFTNNAFL EPNQLIRDMGKIAHLPGVIIHGRYDVICPLDNAWELHQAWPNSELQVIRDAGHAASEPGITDALVRAASKMARRLLDLPP EEA >Mature_323_residues MQTLFPQIKPHARHDLAVDDTHTLYVDESGSPEGLPVVFIHGGPGAGCDAQSRRYFDPNLYRIVTFDQRGCGRSTPHASL ENNTTWDLVEDLERIRKHLGIDKWVLFGGSWGSTLALAYAQTHPERVHGLILRGIFLCRPQEIEWFYQAGASRLFPDYWQ DYLAPIPLDERDDLLSAFHKRLTGNDQIAQMHAAKAWSTWEGRTATLRPNPLVVDRFSEPQRALSIARIECHYFTNNAFL EPNQLIRDMGKIAHLPGVIIHGRYDVICPLDNAWELHQAWPNSELQVIRDAGHAASEPGITDALVRAASKMARRLLDLPP EEA
Specific function: May be involved in proline metabolism and sensitivity to ascamycin. Has ascamycin dealanylating activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR005944 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 36538; Mature: 36538
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLFPQIKPHARHDLAVDDTHTLYVDESGSPEGLPVVFIHGGPGAGCDAQSRRYFDPNL CCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCE YRIVTFDQRGCGRSTPHASLENNTTWDLVEDLERIRKHLGIDKWVLFGGSWGSTLALAYA EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHH QTHPERVHGLILRGIFLCRPQEIEWFYQAGASRLFPDYWQDYLAPIPLDERDDLLSAFHK HCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH RLTGNDQIAQMHAAKAWSTWEGRTATLRPNPLVVDRFSEPQRALSIARIECHYFTNNAFL HCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCHHHHHHEEEEEEEEECCCCEE EPNQLIRDMGKIAHLPGVIIHGRYDVICPLDNAWELHQAWPNSELQVIRDAGHAASEPGI CHHHHHHHHHHHHHCCCEEEECCEEEEECCCCCHHHHHCCCCCHHHHEECCCCCCCCCCH TDALVRAASKMARRLLDLPPEEA HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQTLFPQIKPHARHDLAVDDTHTLYVDESGSPEGLPVVFIHGGPGAGCDAQSRRYFDPNL CCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCE YRIVTFDQRGCGRSTPHASLENNTTWDLVEDLERIRKHLGIDKWVLFGGSWGSTLALAYA EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHH QTHPERVHGLILRGIFLCRPQEIEWFYQAGASRLFPDYWQDYLAPIPLDERDDLLSAFHK HCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH RLTGNDQIAQMHAAKAWSTWEGRTATLRPNPLVVDRFSEPQRALSIARIECHYFTNNAFL HCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCHHHHHHEEEEEEEEECCCCEE EPNQLIRDMGKIAHLPGVIIHGRYDVICPLDNAWELHQAWPNSELQVIRDAGHAASEPGI CHHHHHHHHHHHHHCCCEEEECCEEEEECCCCCHHHHHCCCCCHHHHEECCCCCCCCCCH TDALVRAASKMARRLLDLPPEEA HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8885412; 8870654 [H]